RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 ZNF431Q8TF32 576 aaPredicted RBP3.49□□□□□ -1.85
RTF1-204ENST00000558117 TMEM101Q96IK0 257 aa3.49□□□□□ -1.85
RTF1-204ENST00000558117 ABHD14BQ96IU4 210 aa3.49□□□□□ -1.85
RTF1-204ENST00000558117 LINC01600Q96MT4 127 aa3.49□□□□□ -1.85
RTF1-204ENST00000558117 SLC25A21Q9BQT8 299 aaPredicted RBP3.49□□□□□ -1.85
RTF1-204ENST00000558117 TMEM14BQ9NUH8 114 aa3.49□□□□□ -1.85
RTF1-204ENST00000558117 MRPL27Q9P0M9 148 aaKnown RBP3.49□□□□□ -1.85
RTF1-204ENST00000558117 COPZ2Q9P299 210 aa3.49□□□□□ -1.85
RTF1-204ENST00000558117 C14orf166Q9Y224 244 aaKnown RBP3.49□□□□□ -1.85
RTF1-204ENST00000558117 PGLYRP1O75594 196 aaPredicted RBP3.48□□□□□ -1.85
RTF1-204ENST00000558117 SFT2D2O95562 160 aa3.48□□□□□ -1.85
RTF1-204ENST00000558117 CA2P00918 260 aa3.48□□□□□ -1.85
RTF1-204ENST00000558117 IGLV2-8P01709 118 aa3.48□□□□□ -1.85
RTF1-204ENST00000558117 IL5P05113 134 aa3.48□□□□□ -1.85
RTF1-204ENST00000558117 CTSDP07339 412 aaPredicted RBP3.48□□□□□ -1.85
RTF1-204ENST00000558117 GZMHP20718 246 aa3.48□□□□□ -1.85
RTF1-204ENST00000558117 CTRLP40313 264 aa3.48□□□□□ -1.85
RTF1-204ENST00000558117 PIGPP57054 158 aa3.48□□□□□ -1.85
RTF1-204ENST00000558117 RRAS2P62070 204 aaPredicted RBP3.48□□□□□ -1.85
RTF1-204ENST00000558117 SUPT4H1P63272 117 aaKnown RBP3.48□□□□□ -1.85
RTF1-204ENST00000558117 DHRS2Q13268 280 aa3.48□□□□□ -1.85
RTF1-204ENST00000558117 RPL39P5Q59GN2 51 aa3.48□□□□□ -1.85
RTF1-204ENST00000558117 Q5BKY6 102 aa3.48□□□□□ -1.85
RTF1-204ENST00000558117 Q6ZS49 121 aa3.48□□□□□ -1.85
RTF1-204ENST00000558117 S100A7AQ86SG5 101 aa3.48□□□□□ -1.85
RTF1-204ENST00000558117 C12orf45Q8N5I9 185 aaPredicted RBP3.48□□□□□ -1.85
RTF1-204ENST00000558117 OR51H1Q8NH63 302 aa3.48□□□□□ -1.85
RTF1-204ENST00000558117 GRPEL2Q8TAA5 225 aa3.48□□□□□ -1.85
RTF1-204ENST00000558117 DTD1Q8TEA8 209 aa3.48□□□□□ -1.85
RTF1-204ENST00000558117 GALMQ96C23 342 aa3.48□□□□□ -1.85
RTF1-204ENST00000558117 TIMM17AQ99595 171 aa3.48□□□□□ -1.85
RTF1-204ENST00000558117 C3orf85A0A1B0GTC6 90 aa3.47□□□□□ -1.85
RTF1-204ENST00000558117 C7orf66A4D0T2 115 aa3.47□□□□□ -1.85
RTF1-204ENST00000558117 PGPA6NDG6 321 aa3.47□□□□□ -1.85
RTF1-204ENST00000558117 SMIM9A6NGZ8 99 aa3.47□□□□□ -1.85
RTF1-204ENST00000558117 CRYM-AS1A6NIL9 109 aa3.47□□□□□ -1.85
RTF1-204ENST00000558117 KRBOX1C9JBD0 128 aa3.47□□□□□ -1.85
RTF1-204ENST00000558117 M0R1X1 148 aa3.47□□□□□ -1.85
RTF1-204ENST00000558117 GPR31O00270 319 aa3.47□□□□□ -1.85
RTF1-204ENST00000558117 CREBL2O60519 120 aaPredicted RBP3.47□□□□□ -1.85
RTF1-204ENST00000558117 OR5AC1P0C628 307 aa3.47□□□□□ -1.85
RTF1-204ENST00000558117 SULT1A3P0DMM9 295 aa3.47□□□□□ -1.85
RTF1-204ENST00000558117 SULT1A4P0DMN0 295 aa3.47□□□□□ -1.85
RTF1-204ENST00000558117 CMC4P56277 68 aaPredicted RBP3.47□□□□□ -1.85
RTF1-204ENST00000558117 RPL30P62888 115 aaKnown RBP3.47□□□□□ -1.85
RTF1-204ENST00000558117 DAZ2Q13117 558 aaKnown RBP3.47□□□□□ -1.85
RTF1-204ENST00000558117 TMEM183BQ1AE95 376 aa3.47□□□□□ -1.85
RTF1-204ENST00000558117 MORN2Q502X0 79 aa3.47□□□□□ -1.85
RTF1-204ENST00000558117 FAM222AQ5U5X8 452 aa3.47□□□□□ -1.85
RTF1-204ENST00000558117 UNQ9165/PRO28630Q6UXU0 137 aa3.47□□□□□ -1.85
RTF1-204ENST00000558117 LYZL2Q7Z4W2 148 aa3.47□□□□□ -1.85
RTF1-204ENST00000558117 CAMK2N1Q7Z7J9 78 aa3.47□□□□□ -1.85
RTF1-204ENST00000558117 COMMD7Q86VX2 200 aa3.47□□□□□ -1.85
RTF1-204ENST00000558117 NIT1Q86X76 327 aa3.47□□□□□ -1.85
RTF1-204ENST00000558117 TMEM183AQ8IXX5 376 aa3.47□□□□□ -1.85
RTF1-204ENST00000558117 OR10G4Q8NGN3 311 aa3.47□□□□□ -1.85
RTF1-204ENST00000558117 CIRBP-AS1Q8TBR5 109 aa3.47□□□□□ -1.85
RTF1-204ENST00000558117 TP53RKQ96S44 253 aa3.47□□□□□ -1.85
RTF1-204ENST00000558117 CHAC1Q9BUX1 264 aa3.47□□□□□ -1.85
RTF1-204ENST00000558117 ZNF436Q9C0F3 470 aaPredicted RBP3.47□□□□□ -1.85
RTF1-204ENST00000558117 OR2D2Q9H210 308 aa3.47□□□□□ -1.85
RTF1-204ENST00000558117 NAA60Q9H7X0 242 aa3.47□□□□□ -1.85
RTF1-204ENST00000558117 DAZ3Q9NR90 486 aaKnown RBP3.47□□□□□ -1.85
RTF1-204ENST00000558117 GSKIPQ9P0R6 139 aa3.47□□□□□ -1.85
RTF1-204ENST00000558117 RBM12B-AS1Q9P1G2 102 aa3.47□□□□□ -1.85
RTF1-204ENST00000558117 TGIF2-C20orf24A0A0A6YYL0 155 aa3.46□□□□□ -1.86
RTF1-204ENST00000558117 LOC389332A0A1B0GUA5 103 aa3.46□□□□□ -1.86
RTF1-204ENST00000558117 LRCOL1A6NCL2 159 aa3.46□□□□□ -1.86
RTF1-204ENST00000558117 SNRPGP15A8MWD9 76 aa3.46□□□□□ -1.86
RTF1-204ENST00000558117 LPAR6P43657 344 aa3.46□□□□□ -1.86
RTF1-204ENST00000558117 EIF2B2P49770 351 aaKnown RBP3.46□□□□□ -1.86
RTF1-204ENST00000558117 SULT1A1P50225 295 aa3.46□□□□□ -1.86
RTF1-204ENST00000558117 SULT1A2P50226 295 aa3.46□□□□□ -1.86
RTF1-204ENST00000558117 EMP1P54849 157 aa3.46□□□□□ -1.86
RTF1-204ENST00000558117 H2BFSP57053 126 aa3.46□□□□□ -1.86
RTF1-204ENST00000558117 RHOGP84095 191 aa3.46□□□□□ -1.86
RTF1-204ENST00000558117 ATP5G2Q06055 141 aa3.46□□□□□ -1.86
RTF1-204ENST00000558117 FXYD3Q14802 87 aa3.46□□□□□ -1.86
RTF1-204ENST00000558117 PLGLAQ15195 96 aa3.46□□□□□ -1.86
RTF1-204ENST00000558117 TMEM128Q5BJH2 165 aa3.46□□□□□ -1.86
RTF1-204ENST00000558117 C1orf195Q5TG92 126 aa3.46□□□□□ -1.86
RTF1-204ENST00000558117 Q8N9L7 120 aa3.46□□□□□ -1.86
RTF1-204ENST00000558117 ZNF439Q8NDP4 499 aa3.46□□□□□ -1.86
RTF1-204ENST00000558117 LHFPL5Q8TAF8 219 aa3.46□□□□□ -1.86
RTF1-204ENST00000558117 DEDD2Q8WXF8 326 aa3.46□□□□□ -1.86
RTF1-204ENST00000558117 PHB2Q99623 299 aa3.46□□□□□ -1.86
RTF1-204ENST00000558117 HSD17B10Q99714 261 aaKnown RBP3.46□□□□□ -1.86
RTF1-204ENST00000558117 PDCD10Q9BUL8 212 aa3.46□□□□□ -1.86
RTF1-204ENST00000558117 MRPL20Q9BYC9 149 aaKnown RBP3.46□□□□□ -1.86
RTF1-204ENST00000558117 SLC25A31Q9H0C2 315 aa3.46□□□□□ -1.86
RTF1-204ENST00000558117 COA4Q9NYJ1 87 aa3.46□□□□□ -1.86
RTF1-204ENST00000558117 TMEM189A5PLL7 270 aa3.45□□□□□ -1.86
RTF1-204ENST00000558117 FAM223BA6NKX1 122 aa3.45□□□□□ -1.86
RTF1-204ENST00000558117 H3BP45 60 aa3.45□□□□□ -1.86
RTF1-204ENST00000558117 YPEL1O60688 119 aa3.45□□□□□ -1.86
RTF1-204ENST00000558117 IGKV1-39P01597 117 aa3.45□□□□□ -1.86
RTF1-204ENST00000558117 IGKV1D-39P04432 117 aa3.45□□□□□ -1.86
RTF1-204ENST00000558117 SAA2P0DJI9 122 aaPredicted RBP3.45□□□□□ -1.86
RTF1-204ENST00000558117 G6PCP35575 357 aa3.45□□□□□ -1.86
RTF1-204ENST00000558117 S100A10P60903 97 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms