RNA–Protein interactions for RNA: ENST00000557845.1

NEDD4-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-212ENST00000557845 SFT2D1Q8WV19 159 aa11.39□□□□□ -0.59
NEDD4-212ENST00000557845 FMC1Q96HJ9 113 aa11.39□□□□□ -0.59
NEDD4-212ENST00000557845 TCEAL7Q9BRU2 100 aa11.39□□□□□ -0.59
NEDD4-212ENST00000557845 IGHV3-73A0A0B4J1V6 119 aa11.38□□□□□ -0.59
NEDD4-212ENST00000557845 TRBV6-4A0A1B0GX49 114 aa11.38□□□□□ -0.59
NEDD4-212ENST00000557845 PAGE4O60829 102 aa11.38□□□□□ -0.59
NEDD4-212ENST00000557845 UBE2G1P62253 170 aa11.38□□□□□ -0.59
NEDD4-212ENST00000557845 FAM213BQ8TBF2 198 aa11.38□□□□□ -0.59
NEDD4-212ENST00000557845 ZC2HC1AQ96GY0 325 aa11.38□□□□□ -0.59
NEDD4-212ENST00000557845 LY96Q9Y6Y9 160 aa11.38□□□□□ -0.59
NEDD4-212ENST00000557845 TRAV9-2A0A087WT02 112 aa11.37□□□□□ -0.59
NEDD4-212ENST00000557845 TRBV6-1A0A0K0K1D8 114 aa11.37□□□□□ -0.59
NEDD4-212ENST00000557845 C16orf90A8MZG2 172 aa11.37□□□□□ -0.59
NEDD4-212ENST00000557845 B4DEV8 164 aa11.37□□□□□ -0.59
NEDD4-212ENST00000557845 ASIPP42127 132 aa11.37□□□□□ -0.59
NEDD4-212ENST00000557845 EIF5AP63241 154 aaKnown RBP11.37□□□□□ -0.59
NEDD4-212ENST00000557845 Q6ZRN7 208 aaPredicted RBP11.37□□□□□ -0.59
NEDD4-212ENST00000557845 TMUB2Q71RG4 321 aa11.37□□□□□ -0.59
NEDD4-212ENST00000557845 WFDC10BQ8IUB3 73 aa11.37□□□□□ -0.59
NEDD4-212ENST00000557845 NHLRC2Q8NBF2 726 aa11.37□□□□□ -0.59
NEDD4-212ENST00000557845 PRADC1Q9BSG0 188 aa11.37□□□□□ -0.59
NEDD4-212ENST00000557845 TNFRSF18Q9Y5U5 241 aa11.37□□□□□ -0.59
NEDD4-212ENST00000557845 KRBOX1C9JBD0 128 aa11.36□□□□□ -0.59
NEDD4-212ENST00000557845 PIK3CD-AS1Q5SR53 167 aa11.36□□□□□ -0.59
NEDD4-212ENST00000557845 DNLZQ5SXM8 178 aa11.36□□□□□ -0.59
NEDD4-212ENST00000557845 IL36BQ9NZH7 164 aa11.36□□□□□ -0.59
NEDD4-212ENST00000557845 RYR1P21817 5038 aa11.35□□□□□ -0.59
NEDD4-212ENST00000557845 A0A1B0GV50 99 aa11.35□□□□□ -0.59
NEDD4-212ENST00000557845 K7EP13 123 aa11.35□□□□□ -0.59
NEDD4-212ENST00000557845 M0R036 132 aa11.35□□□□□ -0.59
NEDD4-212ENST00000557845 SH2D1AO60880 128 aa11.35□□□□□ -0.59
NEDD4-212ENST00000557845 PFDN1O60925 122 aa11.35□□□□□ -0.59
NEDD4-212ENST00000557845 LTAP01374 205 aa11.35□□□□□ -0.59
NEDD4-212ENST00000557845 H2AFB1P0C5Y9 115 aa11.35□□□□□ -0.59
NEDD4-212ENST00000557845 MGST1P10620 155 aaKnown RBP11.35□□□□□ -0.59
NEDD4-212ENST00000557845 AKR1C3P42330 323 aa11.35□□□□□ -0.59
NEDD4-212ENST00000557845 TIRAPP58753 221 aa11.35□□□□□ -0.59
NEDD4-212ENST00000557845 RHOHQ15669 191 aa11.35□□□□□ -0.59
NEDD4-212ENST00000557845 ZNF674Q2M3X9 581 aa11.35□□□□□ -0.59
NEDD4-212ENST00000557845 LGALSLQ3ZCW2 172 aaPredicted RBP11.35□□□□□ -0.59
NEDD4-212ENST00000557845 FAM162BQ5T6X4 162 aa11.35□□□□□ -0.59
NEDD4-212ENST00000557845 SPATA12Q7Z6I5 190 aa11.35□□□□□ -0.59
NEDD4-212ENST00000557845 A8MWV9 139 aa11.34□□□□□ -0.59
NEDD4-212ENST00000557845 DNAH10OSP0CZ25 163 aa11.34□□□□□ -0.59
NEDD4-212ENST00000557845 TPT1P13693 172 aaKnown RBP11.34□□□□□ -0.59
NEDD4-212ENST00000557845 EVI2AP22794 236 aa11.34□□□□□ -0.59
NEDD4-212ENST00000557845 ZFP2Q6ZN57 461 aa11.34□□□□□ -0.59
NEDD4-212ENST00000557845 PARLQ9H300 379 aa11.34□□□□□ -0.59
NEDD4-212ENST00000557845 GRIFINA4D1Z8 144 aa11.33□□□□□ -0.6
NEDD4-212ENST00000557845 H3BVH4 76 aa11.33□□□□□ -0.6
NEDD4-212ENST00000557845 S100A9P06702 114 aaKnown RBP11.33□□□□□ -0.6
NEDD4-212ENST00000557845 ARMS2P0C7Q2 107 aa11.33□□□□□ -0.6
NEDD4-212ENST00000557845 DMRTA1Q5VZB9 504 aa11.33□□□□□ -0.6
NEDD4-212ENST00000557845 Q6ZSN1 163 aa11.33□□□□□ -0.6
NEDD4-212ENST00000557845 NFE4Q86UQ8 179 aa11.33□□□□□ -0.6
NEDD4-212ENST00000557845 LINC01559Q495D7 138 aa11.32□□□□□ -0.6
NEDD4-212ENST00000557845 JPT2Q9H910 190 aa11.32□□□□□ -0.6
NEDD4-212ENST00000557845 IGHV3-38A0A0C4DH36 116 aa11.31□□□□□ -0.6
NEDD4-212ENST00000557845 SCO2A0A1W2PP80 73 aa11.31□□□□□ -0.6
NEDD4-212ENST00000557845 KRTAP10-2P60368 255 aa11.31□□□□□ -0.6
NEDD4-212ENST00000557845 SYT8Q8NBV8 401 aa11.31□□□□□ -0.6
NEDD4-212ENST00000557845 ATP6V0E2Q8NHE4 81 aa11.31□□□□□ -0.6
NEDD4-212ENST00000557845 SAMD10Q9BYL1 202 aa11.31□□□□□ -0.6
NEDD4-212ENST00000557845 KRTAP17-1Q9BYP8 105 aa11.31□□□□□ -0.6
NEDD4-212ENST00000557845 MSRB1Q9NZV6 116 aa11.31□□□□□ -0.6
NEDD4-212ENST00000557845 LRP1BQ9NZR2 4599 aa11.31□□□□□ -0.6
NEDD4-212ENST00000557845 TMSB15BA0A087X1C1 80 aa11.3□□□□□ -0.6
NEDD4-212ENST00000557845 TRAV8-6A0A0B4J262 113 aa11.3□□□□□ -0.6
NEDD4-212ENST00000557845 CRYGDP07320 174 aa11.3□□□□□ -0.6
NEDD4-212ENST00000557845 CCL20P78556 96 aa11.3□□□□□ -0.6
NEDD4-212ENST00000557845 UFSP1Q6NVU6 142 aa11.3□□□□□ -0.6
NEDD4-212ENST00000557845 MLST8Q9BVC4 326 aa11.3□□□□□ -0.6
NEDD4-212ENST00000557845 GTSF1LQ9H1H1 148 aa11.3□□□□□ -0.6
NEDD4-212ENST00000557845 SCRT2Q9NQ03 307 aa11.3□□□□□ -0.6
NEDD4-212ENST00000557845 PCLOQ9Y6V0 5065 aa11.29□□□□□ -0.6
NEDD4-212ENST00000557845 OR10J3Q5JRS4 329 aa11.29□□□□□ -0.6
NEDD4-212ENST00000557845 LELP1Q5T871 98 aa11.29□□□□□ -0.6
NEDD4-212ENST00000557845 BAGE2Q86Y30 109 aa11.29□□□□□ -0.6
NEDD4-212ENST00000557845 TCTE3Q8IZS6 198 aa11.29□□□□□ -0.6
NEDD4-212ENST00000557845 C10orf126Q8N4M7 172 aa11.29□□□□□ -0.6
NEDD4-212ENST00000557845 BOLA1Q9Y3E2 137 aa11.29□□□□□ -0.6
NEDD4-212ENST00000557845 PHLDA3Q9Y5J5 127 aa11.29□□□□□ -0.6
NEDD4-212ENST00000557845 CDK2AP2O75956 126 aa11.28□□□□□ -0.6
NEDD4-212ENST00000557845 RAB5CP51148 216 aa11.28□□□□□ -0.6
NEDD4-212ENST00000557845 LINC01556Q5JQF7 62 aa11.28□□□□□ -0.6
NEDD4-212ENST00000557845 EIF5AL1Q6IS14 154 aaKnown RBP11.28□□□□□ -0.6
NEDD4-212ENST00000557845 SFRP2Q96HF1 295 aa11.28□□□□□ -0.6
NEDD4-212ENST00000557845 Q9UF83 564 aa11.28□□□□□ -0.6
NEDD4-212ENST00000557845 TRAV1-1A0A0B4J248 108 aa11.27□□□□□ -0.61
NEDD4-212ENST00000557845 GAGE12JA6NER3 117 aa11.27□□□□□ -0.61
NEDD4-212ENST00000557845 M0R381 172 aa11.27□□□□□ -0.61
NEDD4-212ENST00000557845 RHODO00212 210 aa11.27□□□□□ -0.61
NEDD4-212ENST00000557845 EREGO14944 169 aa11.27□□□□□ -0.61
NEDD4-212ENST00000557845 ERVFC1-1P60608 527 aa11.27□□□□□ -0.61
NEDD4-212ENST00000557845 GAGE1Q13065 139 aa11.27□□□□□ -0.61
NEDD4-212ENST00000557845 GAGE4Q13068 117 aa11.27□□□□□ -0.61
NEDD4-212ENST00000557845 GAGE5Q13069 117 aa11.27□□□□□ -0.61
NEDD4-212ENST00000557845 GAGE13Q4V321 117 aa11.27□□□□□ -0.61
NEDD4-212ENST00000557845 C14orf178Q8N769 122 aaPredicted RBP11.27□□□□□ -0.61
NEDD4-212ENST00000557845 GNG13Q9P2W3 67 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms