RNA–Protein interactions for RNA: ENST00000557678.1

GPHN-216, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-216ENST00000557678 LRP5O75197 1615 aa0.78□□□□□ -2.29
GPHN-216ENST00000557678 KIF13AQ9H1H9 1805 aa0.78□□□□□ -2.29
GPHN-216ENST00000557678 DLG5Q8TDM6 1919 aa0.77□□□□□ -2.29
GPHN-216ENST00000557678 AKAP11Q9UKA4 1901 aa0.77□□□□□ -2.29
GPHN-216ENST00000557678 ASCC3Q8N3C0 2202 aaKnown RBP0.77□□□□□ -2.29
GPHN-216ENST00000557678 KMT2BQ9UMN6 2715 aaPredicted RBP0.77□□□□□ -2.29
GPHN-216ENST00000557678 TRBV10-1A0A0K0K1A3 114 aa0.77□□□□□ -2.29
GPHN-216ENST00000557678 NUPR2A6NF83 97 aa0.77□□□□□ -2.29
GPHN-216ENST00000557678 FAM25AB3EWG3 89 aa0.77□□□□□ -2.29
GPHN-216ENST00000557678 FAM25CB3EWG5 89 aa0.77□□□□□ -2.29
GPHN-216ENST00000557678 FAM25GB3EWG6 89 aa0.77□□□□□ -2.29
GPHN-216ENST00000557678 NCR3O14931 201 aa0.77□□□□□ -2.29
GPHN-216ENST00000557678 PRB1P04280 392 aa0.77□□□□□ -2.29
GPHN-216ENST00000557678 APODP05090 189 aa0.77□□□□□ -2.29
GPHN-216ENST00000557678 LYNX1P0DP58 116 aa0.77□□□□□ -2.29
GPHN-216ENST00000557678 RPL37AP61513 92 aaKnown RBP0.77□□□□□ -2.29
GPHN-216ENST00000557678 OCIAD2Q56VL3 154 aa0.77□□□□□ -2.29
GPHN-216ENST00000557678 LYPD5Q6UWN5 251 aa0.77□□□□□ -2.29
GPHN-216ENST00000557678 Q6ZSA8 131 aa0.77□□□□□ -2.29
GPHN-216ENST00000557678 KCNRGQ8N5I3 272 aa0.77□□□□□ -2.29
GPHN-216ENST00000557678 AMELYQ99218 206 aa0.77□□□□□ -2.29
GPHN-216ENST00000557678 LIMD2Q9BT23 127 aa0.77□□□□□ -2.29
GPHN-216ENST00000557678 ATG5Q9H1Y0 275 aa0.77□□□□□ -2.29
GPHN-216ENST00000557678 DAPK1P53355 1430 aa0.77□□□□□ -2.29
GPHN-216ENST00000557678 SMG6Q86US8 1419 aaKnown RBP0.77□□□□□ -2.29
GPHN-216ENST00000557678 CDK12Q9NYV4 1490 aaPredicted RBP0.77□□□□□ -2.29
GPHN-216ENST00000557678 ZNF142P52746 1687 aaPredicted RBP0.77□□□□□ -2.29
GPHN-216ENST00000557678 PHLPP1O60346 1717 aa0.77□□□□□ -2.29
GPHN-216ENST00000557678 MUC16Q8WXI7 14507 aa0.76□□□□□ -2.29
GPHN-216ENST00000557678 FOCADQ5VW36 1801 aa0.76□□□□□ -2.29
GPHN-216ENST00000557678 LAMB1P07942 1786 aa0.76□□□□□ -2.29
GPHN-216ENST00000557678 DLEC1Q9Y238 1755 aa0.76□□□□□ -2.29
GPHN-216ENST00000557678 FAM135AQ9P2D6 1515 aa0.76□□□□□ -2.29
GPHN-216ENST00000557678 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.76□□□□□ -2.29
GPHN-216ENST00000557678 TRAV17A0A0B4J275 112 aa0.76□□□□□ -2.29
GPHN-216ENST00000557678 HIGD1CA8MV81 97 aa0.76□□□□□ -2.29
GPHN-216ENST00000557678 SPCS2Q15005 226 aa0.76□□□□□ -2.29
GPHN-216ENST00000557678 SPANXN1Q5VSR9 72 aa0.76□□□□□ -2.29
GPHN-216ENST00000557678 Q6ZUT4 128 aa0.76□□□□□ -2.29
GPHN-216ENST00000557678 SBSPONQ8IVN8 264 aa0.76□□□□□ -2.29
GPHN-216ENST00000557678 PPP1R1CQ8WVI7 109 aa0.76□□□□□ -2.29
GPHN-216ENST00000557678 MRPL36Q9P0J6 103 aaKnown RBP0.76□□□□□ -2.29
GPHN-216ENST00000557678 FLG2Q5D862 2391 aaPredicted RBP0.76□□□□□ -2.29
GPHN-216ENST00000557678 SPTBP11277 2137 aa0.76□□□□□ -2.29
GPHN-216ENST00000557678 TET1Q8NFU7 2136 aa0.76□□□□□ -2.29
GPHN-216ENST00000557678 CASZ1Q86V15 1759 aa0.75□□□□□ -2.29
GPHN-216ENST00000557678 RIMS1Q86UR5 1692 aaKnown RBP0.75□□□□□ -2.29
GPHN-216ENST00000557678 CTTNBP2Q8WZ74 1663 aa0.75□□□□□ -2.29
GPHN-216ENST00000557678 TRAV12-2A0A075B6T6 113 aa0.75□□□□□ -2.29
GPHN-216ENST00000557678 PIGBOS1A0A0B4J2F0 54 aa0.75□□□□□ -2.29
GPHN-216ENST00000557678 TEX49A0A1B0GTD5 131 aa0.75□□□□□ -2.29
GPHN-216ENST00000557678 GNG7O60262 68 aa0.75□□□□□ -2.29
GPHN-216ENST00000557678 PIPP12273 146 aaPredicted RBP0.75□□□□□ -2.29
GPHN-216ENST00000557678 IL7P13232 177 aa0.75□□□□□ -2.29
GPHN-216ENST00000557678 FGF7P21781 194 aa0.75□□□□□ -2.29
GPHN-216ENST00000557678 CSAG1Q6PB30 78 aa0.75□□□□□ -2.29
GPHN-216ENST00000557678 Q6ZQY7 126 aa0.75□□□□□ -2.29
GPHN-216ENST00000557678 DEFB132Q7Z7B7 95 aa0.75□□□□□ -2.29
GPHN-216ENST00000557678 SDF2Q99470 211 aa0.75□□□□□ -2.29
GPHN-216ENST00000557678 SNRNP25Q9BV90 132 aaKnown RBP0.75□□□□□ -2.29
GPHN-216ENST00000557678 RERGLQ9H628 205 aa0.75□□□□□ -2.29
GPHN-216ENST00000557678 AFDNP55196 1824 aaKnown RBP0.75□□□□□ -2.29
GPHN-216ENST00000557678 KDM6BO15054 1643 aa0.75□□□□□ -2.29
GPHN-216ENST00000557678 KIAA0100Q14667 2235 aaKnown RBP0.74□□□□□ -2.29
GPHN-216ENST00000557678 NCOA6Q14686 2063 aaPredicted RBP0.74□□□□□ -2.29
GPHN-216ENST00000557678 CFTRP13569 1480 aa0.74□□□□□ -2.29
GPHN-216ENST00000557678 IBTKQ9P2D0 1353 aaPredicted RBP0.74□□□□□ -2.29
GPHN-216ENST00000557678 CXorf51AA0A1B0GTR3 108 aa0.74□□□□□ -2.29
GPHN-216ENST00000557678 A6NIN4 97 aa0.74□□□□□ -2.29
GPHN-216ENST00000557678 IGKCP01834 107 aa0.74□□□□□ -2.29
GPHN-216ENST00000557678 BTG2P78543 158 aa0.74□□□□□ -2.29
GPHN-216ENST00000557678 MIC13Q5XKP0 118 aa0.74□□□□□ -2.29
GPHN-216ENST00000557678 RPL7L1Q6DKI1 246 aaKnown RBP0.74□□□□□ -2.29
GPHN-216ENST00000557678 XAF1Q6GPH4 301 aa0.74□□□□□ -2.29
GPHN-216ENST00000557678 OR2T2Q6IF00 324 aa0.74□□□□□ -2.29
GPHN-216ENST00000557678 KRTAP5-10Q6L8G5 202 aa0.74□□□□□ -2.29
GPHN-216ENST00000557678 Q6ZS92 163 aa0.74□□□□□ -2.29
GPHN-216ENST00000557678 TMEM203Q969S6 136 aa0.74□□□□□ -2.29
GPHN-216ENST00000557678 SPTSSAQ969W0 71 aa0.74□□□□□ -2.29
GPHN-216ENST00000557678 DPH3Q96FX2 82 aa0.74□□□□□ -2.29
GPHN-216ENST00000557678 PDCD10Q9BUL8 212 aa0.74□□□□□ -2.29
GPHN-216ENST00000557678 RREB1Q92766 1687 aa0.74□□□□□ -2.29
GPHN-216ENST00000557678 COL6A6A6NMZ7 2263 aa0.73□□□□□ -2.29
GPHN-216ENST00000557678 BLMP54132 1417 aaPredicted RBP0.73□□□□□ -2.29
GPHN-216ENST00000557678 ROCK2O75116 1388 aaKnown RBP0.73□□□□□ -2.29
GPHN-216ENST00000557678 M0R129 80 aa0.73□□□□□ -2.29
GPHN-216ENST00000557678 DLEU1O43261 78 aa0.73□□□□□ -2.29
GPHN-216ENST00000557678 NDUFB6O95139 128 aa0.73□□□□□ -2.29
GPHN-216ENST00000557678 IFNA17P01571 189 aa0.73□□□□□ -2.29
GPHN-216ENST00000557678 IL5P05113 134 aa0.73□□□□□ -2.29
GPHN-216ENST00000557678 CCKP06307 115 aa0.73□□□□□ -2.29
GPHN-216ENST00000557678 SLC25A6P12236 298 aa0.73□□□□□ -2.29
GPHN-216ENST00000557678 CAV3P56539 151 aa0.73□□□□□ -2.29
GPHN-216ENST00000557678 FXYD4P59646 89 aa0.73□□□□□ -2.29
GPHN-216ENST00000557678 MRPS10P82664 201 aaKnown RBP0.73□□□□□ -2.29
GPHN-216ENST00000557678 IQCJQ1A5X6 159 aa0.73□□□□□ -2.29
GPHN-216ENST00000557678 WHAMMP3Q1A5X7 153 aa0.73□□□□□ -2.29
GPHN-216ENST00000557678 C12orf73Q69YU5 71 aa0.73□□□□□ -2.29
GPHN-216ENST00000557678 SLC48A1Q6P1K1 146 aa0.73□□□□□ -2.29
GPHN-216ENST00000557678 C10orf99Q6UWK7 81 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms