RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 JMJD1CQ15652 2540 aa9.18□□□□□ -0.94
SHMT2-233ENST00000557529 IGHV3-16A0A0C4DH30 117 aa9.18□□□□□ -0.94
SHMT2-233ENST00000557529 NXPH4O95158 308 aa9.18□□□□□ -0.94
SHMT2-233ENST00000557529 LINC00310P59036 64 aa9.18□□□□□ -0.94
SHMT2-233ENST00000557529 IQCJQ1A5X6 159 aa9.18□□□□□ -0.94
SHMT2-233ENST00000557529 KRTAP24-1Q3LI83 254 aa9.18□□□□□ -0.94
SHMT2-233ENST00000557529 MRPL51Q4U2R6 128 aaKnown RBP9.18□□□□□ -0.94
SHMT2-233ENST00000557529 PACRGQ96M98 296 aaPredicted RBP9.18□□□□□ -0.94
SHMT2-233ENST00000557529 LINC00467Q9BRT7 94 aa9.18□□□□□ -0.94
SHMT2-233ENST00000557529 CUBNO60494 3623 aa9.17□□□□□ -0.94
SHMT2-233ENST00000557529 D6R8Y8 96 aa9.17□□□□□ -0.94
SHMT2-233ENST00000557529 M0R381 172 aa9.17□□□□□ -0.94
SHMT2-233ENST00000557529 NUPR1O60356 82 aa9.17□□□□□ -0.94
SHMT2-233ENST00000557529 RAB4AP20338 218 aa9.17□□□□□ -0.94
SHMT2-233ENST00000557529 CKS2P33552 79 aa9.17□□□□□ -0.94
SHMT2-233ENST00000557529 Q8N1Y9 231 aa9.17□□□□□ -0.94
SHMT2-233ENST00000557529 OR10D4PQ8NGN7 298 aa9.17□□□□□ -0.94
SHMT2-233ENST00000557529 RNF185Q96GF1 192 aa9.17□□□□□ -0.94
SHMT2-233ENST00000557529 C9orf85Q96MD7 179 aa9.17□□□□□ -0.94
SHMT2-233ENST00000557529 AGRNO00468 2067 aa9.17□□□□□ -0.94
SHMT2-233ENST00000557529 CBY3A6NI87 242 aa9.16□□□□□ -0.94
SHMT2-233ENST00000557529 SMIM6P0DI80 62 aa9.16□□□□□ -0.94
SHMT2-233ENST00000557529 EVI2AP22794 236 aa9.16□□□□□ -0.94
SHMT2-233ENST00000557529 SYT8Q8NBV8 401 aa9.16□□□□□ -0.94
SHMT2-233ENST00000557529 CHCHD1Q96BP2 118 aaKnown RBP9.16□□□□□ -0.94
SHMT2-233ENST00000557529 PRELID3AQ96N28 172 aa9.16□□□□□ -0.94
SHMT2-233ENST00000557529 AP1S3Q96PC3 154 aa9.16□□□□□ -0.94
SHMT2-233ENST00000557529 RCHY1Q96PM5 261 aa9.16□□□□□ -0.94
SHMT2-233ENST00000557529 ZNF747Q9BV97 191 aa9.16□□□□□ -0.94
SHMT2-233ENST00000557529 SAMD10Q9BYL1 202 aa9.16□□□□□ -0.94
SHMT2-233ENST00000557529 C19orf73Q9NVV2 129 aa9.16□□□□□ -0.94
SHMT2-233ENST00000557529 LAMTOR2Q9Y2Q5 125 aa9.16□□□□□ -0.94
SHMT2-233ENST00000557529 RBMY1A1P0DJD3 496 aaKnown RBP9.15□□□□□ -0.94
SHMT2-233ENST00000557529 RBMY1CP0DJD4 496 aa9.15□□□□□ -0.94
SHMT2-233ENST00000557529 RBMY1FQ15415 496 aaKnown RBP9.15□□□□□ -0.94
SHMT2-233ENST00000557529 NIT1Q86X76 327 aa9.15□□□□□ -0.94
SHMT2-233ENST00000557529 WFDC9Q8NEX5 89 aa9.15□□□□□ -0.94
SHMT2-233ENST00000557529 DPH3P1Q9H4G8 78 aa9.15□□□□□ -0.94
SHMT2-233ENST00000557529 HSBP1O75506 76 aa9.14□□□□□ -0.95
SHMT2-233ENST00000557529 RNASEKQ6P5S7 137 aaKnown RBP9.14□□□□□ -0.95
SHMT2-233ENST00000557529 MORN3Q6PF18 240 aaPredicted RBP9.14□□□□□ -0.95
SHMT2-233ENST00000557529 GTSCR1Q86UQ5 136 aa9.14□□□□□ -0.95
SHMT2-233ENST00000557529 MRAP2Q96G30 205 aa9.14□□□□□ -0.95
SHMT2-233ENST00000557529 LINC01587Q99440 93 aa9.14□□□□□ -0.95
SHMT2-233ENST00000557529 MDFICQ9P1T7 246 aa9.14□□□□□ -0.95
SHMT2-233ENST00000557529 PMCHP20382 165 aa9.13□□□□□ -0.95
SHMT2-233ENST00000557529 AMTP48728 403 aa9.13□□□□□ -0.95
SHMT2-233ENST00000557529 LINC00518Q8N0U6 118 aa9.13□□□□□ -0.95
SHMT2-233ENST00000557529 C1QTNF4Q9BXJ3 329 aa9.13□□□□□ -0.95
SHMT2-233ENST00000557529 XCL2Q9UBD3 114 aa9.13□□□□□ -0.95
SHMT2-233ENST00000557529 LINC00614P0C842 121 aa9.12□□□□□ -0.95
SHMT2-233ENST00000557529 SMIM17P0DL12 118 aa9.12□□□□□ -0.95
SHMT2-233ENST00000557529 ZNF415Q09FC8 603 aa9.12□□□□□ -0.95
SHMT2-233ENST00000557529 SHISA2Q6UWI4 295 aa9.12□□□□□ -0.95
SHMT2-233ENST00000557529 FA2HQ7L5A8 372 aa9.12□□□□□ -0.95
SHMT2-233ENST00000557529 C3orf56Q8N813 242 aa9.12□□□□□ -0.95
SHMT2-233ENST00000557529 PRSS3P2Q8NHM4 247 aa9.12□□□□□ -0.95
SHMT2-233ENST00000557529 TMEM158Q8WZ71 300 aa9.12□□□□□ -0.95
SHMT2-233ENST00000557529 TMEM208Q9BTX3 173 aa9.12□□□□□ -0.95
SHMT2-233ENST00000557529 NIPBLQ6KC79 2804 aaeCLIP9.12□□□□□ -0.95
SHMT2-233ENST00000557529 ATRQ13535 2644 aa9.12□□□□□ -0.95
SHMT2-233ENST00000557529 TEP1Q99973 2627 aaKnown RBP9.12□□□□□ -0.95
SHMT2-233ENST00000557529 SMKR1H3BMG3 65 aa9.12□□□□□ -0.95
SHMT2-233ENST00000557529 SPRY2O43597 315 aa9.12□□□□□ -0.95
SHMT2-233ENST00000557529 NCR2O95944 276 aa9.12□□□□□ -0.95
SHMT2-233ENST00000557529 NPYP01303 97 aa9.12□□□□□ -0.95
SHMT2-233ENST00000557529 HTN1P15515 57 aa9.12□□□□□ -0.95
SHMT2-233ENST00000557529 C12orf54Q6X4T0 127 aa9.12□□□□□ -0.95
SHMT2-233ENST00000557529 PRIMA1Q86XR5 153 aa9.12□□□□□ -0.95
SHMT2-233ENST00000557529 C14orf178Q8N769 122 aaPredicted RBP9.12□□□□□ -0.95
SHMT2-233ENST00000557529 PTH2Q96A98 100 aa9.12□□□□□ -0.95
SHMT2-233ENST00000557529 WFDC10AQ9H1F0 79 aa9.12□□□□□ -0.95
SHMT2-233ENST00000557529 MAP1LC3AQ9H492 121 aa9.12□□□□□ -0.95
SHMT2-233ENST00000557529 GSN-AS1Q9NRJ2 163 aa9.12□□□□□ -0.95
SHMT2-233ENST00000557529 GOLT1BQ9Y3E0 138 aa9.12□□□□□ -0.95
SHMT2-233ENST00000557529 WIPF1O43516 503 aa9.11□□□□□ -0.95
SHMT2-233ENST00000557529 TNFRSF6BO95407 300 aa9.11□□□□□ -0.95
SHMT2-233ENST00000557529 PPP1R17O96001 155 aa9.11□□□□□ -0.95
SHMT2-233ENST00000557529 PIK3CD-AS1Q5SR53 167 aa9.11□□□□□ -0.95
SHMT2-233ENST00000557529 POM121L12Q8N7R1 296 aa9.11□□□□□ -0.95
SHMT2-233ENST00000557529 SPATA3Q8NHX4 192 aa9.11□□□□□ -0.95
SHMT2-233ENST00000557529 URB1-AS1Q96HZ7 61 aa9.11□□□□□ -0.95
SHMT2-233ENST00000557529 C12orf57Q99622 126 aa9.11□□□□□ -0.95
SHMT2-233ENST00000557529 SPXQ9BT56 116 aa9.11□□□□□ -0.95
SHMT2-233ENST00000557529 AP5S1Q9NUS5 200 aa9.11□□□□□ -0.95
SHMT2-233ENST00000557529 M0R2P5 195 aa9.1□□□□□ -0.95
SHMT2-233ENST00000557529 MGPP08493 103 aa9.1□□□□□ -0.95
SHMT2-233ENST00000557529 RPL35AP18077 110 aaKnown RBP9.1□□□□□ -0.95
SHMT2-233ENST00000557529 JOSD1Q15040 202 aaPredicted RBP9.1□□□□□ -0.95
SHMT2-233ENST00000557529 ZNF876PQ49A33 203 aa9.1□□□□□ -0.95
SHMT2-233ENST00000557529 C1orf158Q8N1D5 194 aa9.1□□□□□ -0.95
SHMT2-233ENST00000557529 DEFB125Q8N687 156 aa9.1□□□□□ -0.95
SHMT2-233ENST00000557529 KIF25-AS1Q9Y6Z4 181 aa9.1□□□□□ -0.95
SHMT2-233ENST00000557529 LOC389332A0A1B0GUA5 103 aa9.09□□□□□ -0.95
SHMT2-233ENST00000557529 PRSS47A8MTI9 375 aa9.09□□□□□ -0.95
SHMT2-233ENST00000557529 IGLL1P15814 213 aa9.09□□□□□ -0.95
SHMT2-233ENST00000557529 IFI27P40305 119 aaPredicted RBP9.09□□□□□ -0.95
SHMT2-233ENST00000557529 PYY3Q5JQD4 70 aa9.09□□□□□ -0.95
SHMT2-233ENST00000557529 FAM19A2Q8N3H0 131 aa9.09□□□□□ -0.95
SHMT2-233ENST00000557529 NXT2Q9NPJ8 142 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms