RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 ZNF727A8MUV8 499 aa10.42□□□□□ -0.74
VIPAS39-210ENST00000557466 SFTA3P0C7M3 94 aa10.42□□□□□ -0.74
VIPAS39-210ENST00000557466 ZNF876PQ49A33 203 aa10.42□□□□□ -0.74
VIPAS39-210ENST00000557466 PTH2Q96A98 100 aa10.42□□□□□ -0.74
VIPAS39-210ENST00000557466 DAZAP1Q96EP5 407 aaKnown RBP10.42□□□□□ -0.74
VIPAS39-210ENST00000557466 ZNF479Q96JC4 524 aa10.42□□□□□ -0.74
VIPAS39-210ENST00000557466 NDUFAF3Q9BU61 184 aa10.42□□□□□ -0.74
VIPAS39-210ENST00000557466 TRAV4A0A0B4J268 109 aa10.41□□□□□ -0.74
VIPAS39-210ENST00000557466 P01737 135 aa10.41□□□□□ -0.74
VIPAS39-210ENST00000557466 MED14OSP0DP75 135 aa10.41□□□□□ -0.74
VIPAS39-210ENST00000557466 OR2D3Q8NGH3 330 aa10.41□□□□□ -0.74
VIPAS39-210ENST00000557466 SMDT1Q9H4I9 107 aa10.41□□□□□ -0.74
VIPAS39-210ENST00000557466 SCRT2Q9NQ03 307 aa10.41□□□□□ -0.74
VIPAS39-210ENST00000557466 LY96Q9Y6Y9 160 aa10.41□□□□□ -0.74
VIPAS39-210ENST00000557466 TRAV26-1A0A087WT03 109 aa10.4□□□□□ -0.74
VIPAS39-210ENST00000557466 LCE6AA0A183 80 aa10.4□□□□□ -0.74
VIPAS39-210ENST00000557466 GZMBP10144 247 aa10.4□□□□□ -0.74
VIPAS39-210ENST00000557466 FHL2Q14192 279 aa10.4□□□□□ -0.74
VIPAS39-210ENST00000557466 NUDT10Q8NFP7 164 aa10.4□□□□□ -0.74
VIPAS39-210ENST00000557466 LINC00476Q8WZB0 136 aa10.4□□□□□ -0.74
VIPAS39-210ENST00000557466 NUDT11Q96G61 164 aa10.4□□□□□ -0.74
VIPAS39-210ENST00000557466 RNASE7Q9H1E1 156 aaKnown RBP10.4□□□□□ -0.74
VIPAS39-210ENST00000557466 TENM2Q9NT68 2774 aa10.39□□□□□ -0.75
VIPAS39-210ENST00000557466 A0A0J9YY99 117 aa10.39□□□□□ -0.75
VIPAS39-210ENST00000557466 RS1O15537 224 aa10.39□□□□□ -0.75
VIPAS39-210ENST00000557466 LINC01551Q86U37 167 aa10.39□□□□□ -0.75
VIPAS39-210ENST00000557466 OR4C5Q8NGB2 326 aa10.39□□□□□ -0.75
VIPAS39-210ENST00000557466 PHLDA3Q9Y5J5 127 aa10.39□□□□□ -0.75
VIPAS39-210ENST00000557466 RYR3Q15413 4870 aa10.38□□□□□ -0.75
VIPAS39-210ENST00000557466 SNAI2O43623 268 aa10.38□□□□□ -0.75
VIPAS39-210ENST00000557466 RPS20P60866 119 aaKnown RBP10.38□□□□□ -0.75
VIPAS39-210ENST00000557466 FAM74A3Q4VXF1 159 aa10.38□□□□□ -0.75
VIPAS39-210ENST00000557466 PIK3CD-AS1Q5SR53 167 aa10.38□□□□□ -0.75
VIPAS39-210ENST00000557466 CFAP126Q5VTH2 177 aa10.38□□□□□ -0.75
VIPAS39-210ENST00000557466 DMRTA1Q5VZB9 504 aa10.38□□□□□ -0.75
VIPAS39-210ENST00000557466 C15orf53Q8NAA6 179 aa10.38□□□□□ -0.75
VIPAS39-210ENST00000557466 SYT8Q8NBV8 401 aa10.38□□□□□ -0.75
VIPAS39-210ENST00000557466 OR10AG1Q8NH19 301 aa10.38□□□□□ -0.75
VIPAS39-210ENST00000557466 VSIG2Q96IQ7 327 aa10.38□□□□□ -0.75
VIPAS39-210ENST00000557466 RPP21Q9H633 154 aaKnown RBP10.38□□□□□ -0.75
VIPAS39-210ENST00000557466 ALMS1Q8TCU4 4167 aa10.38□□□□□ -0.75
VIPAS39-210ENST00000557466 TRGV4A0A0C4DH28 118 aa10.37□□□□□ -0.75
VIPAS39-210ENST00000557466 M0R381 172 aa10.37□□□□□ -0.75
VIPAS39-210ENST00000557466 NXPH4O95158 308 aa10.37□□□□□ -0.75
VIPAS39-210ENST00000557466 OR5AL1P0C617 328 aa10.37□□□□□ -0.75
VIPAS39-210ENST00000557466 IGLC6P0CF74 106 aa10.37□□□□□ -0.75
VIPAS39-210ENST00000557466 FAM231DQ6ZW35 169 aa10.37□□□□□ -0.75
VIPAS39-210ENST00000557466 ZFP82Q8N141 532 aa10.37□□□□□ -0.75
VIPAS39-210ENST00000557466 SSBP4Q9BWG4 385 aaPredicted RBP10.37□□□□□ -0.75
VIPAS39-210ENST00000557466 JPT2Q9H910 190 aa10.37□□□□□ -0.75
VIPAS39-210ENST00000557466 MUC21A0A0G2JKD1 596 aa10.36□□□□□ -0.75
VIPAS39-210ENST00000557466 MUC21A0A140T8X8 626 aa10.36□□□□□ -0.75
VIPAS39-210ENST00000557466 A8MWV9 139 aa10.36□□□□□ -0.75
VIPAS39-210ENST00000557466 NUDT3O95989 172 aa10.36□□□□□ -0.75
VIPAS39-210ENST00000557466 CRYBA4P53673 196 aa10.36□□□□□ -0.75
VIPAS39-210ENST00000557466 RPL23P62829 140 aaKnown RBP10.36□□□□□ -0.75
VIPAS39-210ENST00000557466 TMEM241Q24JQ0 296 aa10.36□□□□□ -0.75
VIPAS39-210ENST00000557466 SOHLH1Q5JUK2 328 aa10.36□□□□□ -0.75
VIPAS39-210ENST00000557466 FER1L6-AS1Q8NA97 138 aa10.36□□□□□ -0.75
VIPAS39-210ENST00000557466 NAT8Q9UHE5 227 aa10.36□□□□□ -0.75
VIPAS39-210ENST00000557466 PRO0255Q9UI72 69 aa10.36□□□□□ -0.75
VIPAS39-210ENST00000557466 PLECQ15149 4684 aaKnown RBP10.36□□□□□ -0.75
VIPAS39-210ENST00000557466 IGHV3-73A0A0B4J1V6 119 aa10.35□□□□□ -0.75
VIPAS39-210ENST00000557466 XKRY2A2RUG3 117 aa10.35□□□□□ -0.75
VIPAS39-210ENST00000557466 H3BNG1 76 aa10.35□□□□□ -0.75
VIPAS39-210ENST00000557466 PAX4O43316 350 aa10.35□□□□□ -0.75
VIPAS39-210ENST00000557466 GATCO43716 136 aaKnown RBP10.35□□□□□ -0.75
VIPAS39-210ENST00000557466 LY6G6CO95867 125 aa10.35□□□□□ -0.75
VIPAS39-210ENST00000557466 ERVFC1-1P60608 527 aa10.35□□□□□ -0.75
VIPAS39-210ENST00000557466 LGALS9CQ6DKI2 356 aa10.35□□□□□ -0.75
VIPAS39-210ENST00000557466 ISOC2Q96AB3 205 aa10.35□□□□□ -0.75
VIPAS39-210ENST00000557466 TPPP3Q9BW30 176 aa10.35□□□□□ -0.75
VIPAS39-210ENST00000557466 SAMD10Q9BYL1 202 aa10.35□□□□□ -0.75
VIPAS39-210ENST00000557466 HHLA3Q9XRX5 114 aa10.35□□□□□ -0.75
VIPAS39-210ENST00000557466 GATA1P15976 413 aaPredicted RBP10.34□□□□□ -0.75
VIPAS39-210ENST00000557466 SLAQ13239 276 aa10.34□□□□□ -0.75
VIPAS39-210ENST00000557466 ADIRFQ15847 76 aa10.34□□□□□ -0.75
VIPAS39-210ENST00000557466 UFSP1Q6NVU6 142 aa10.34□□□□□ -0.75
VIPAS39-210ENST00000557466 SFRP2Q96HF1 295 aa10.34□□□□□ -0.75
VIPAS39-210ENST00000557466 CIDEAO60543 219 aa10.33□□□□□ -0.76
VIPAS39-210ENST00000557466 CTRLP40313 264 aa10.33□□□□□ -0.76
VIPAS39-210ENST00000557466 SSTP61278 116 aa10.33□□□□□ -0.76
VIPAS39-210ENST00000557466 SPANXN1Q5VSR9 72 aa10.33□□□□□ -0.76
VIPAS39-210ENST00000557466 OSTCQ9NRP0 149 aa10.33□□□□□ -0.76
VIPAS39-210ENST00000557466 A0A087WWL8 130 aa10.32□□□□□ -0.76
VIPAS39-210ENST00000557466 A0A096LPF7 62 aa10.32□□□□□ -0.76
VIPAS39-210ENST00000557466 P0DMU3 169 aa10.32□□□□□ -0.76
VIPAS39-210ENST00000557466 FAM231AP0DMU4 169 aa10.32□□□□□ -0.76
VIPAS39-210ENST00000557466 FAM231CP0DMU5 169 aa10.32□□□□□ -0.76
VIPAS39-210ENST00000557466 CT83Q5H943 113 aa10.32□□□□□ -0.76
VIPAS39-210ENST00000557466 FAM74A4Q5TZK3 123 aa10.32□□□□□ -0.76
VIPAS39-210ENST00000557466 LYZL1Q6UWQ5 148 aa10.32□□□□□ -0.76
VIPAS39-210ENST00000557466 ZFP2Q6ZN57 461 aa10.32□□□□□ -0.76
VIPAS39-210ENST00000557466 GTSF1Q8WW33 167 aa10.32□□□□□ -0.76
VIPAS39-210ENST00000557466 ICOSQ9Y6W8 199 aa10.32□□□□□ -0.76
VIPAS39-210ENST00000557466 LOC100131303A0A0U1RQF7 123 aa10.31□□□□□ -0.76
VIPAS39-210ENST00000557466 A0A1W2PPQ1 181 aa10.31□□□□□ -0.76
VIPAS39-210ENST00000557466 RHODO00212 210 aa10.31□□□□□ -0.76
VIPAS39-210ENST00000557466 CRYGDP07320 174 aa10.31□□□□□ -0.76
VIPAS39-210ENST00000557466 GYPEP15421 78 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms