RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 LINC00479Q96M42 142 aa9.65□□□□□ -0.86
VPS33B-206ENST00000557358 CIDEAO60543 219 aa9.64□□□□□ -0.87
VPS33B-206ENST00000557358 MRPL23Q16540 153 aaKnown RBP9.64□□□□□ -0.87
VPS33B-206ENST00000557358 SLC7A5P1Q8MH63 180 aa9.64□□□□□ -0.87
VPS33B-206ENST00000557358 TRBV6-1A0A0K0K1D8 114 aa9.63□□□□□ -0.87
VPS33B-206ENST00000557358 C9JCJ5 164 aa9.63□□□□□ -0.87
VPS33B-206ENST00000557358 ORM1P02763 201 aa9.63□□□□□ -0.87
VPS33B-206ENST00000557358 ASIPP42127 132 aa9.63□□□□□ -0.87
VPS33B-206ENST00000557358 ZNF80P51504 273 aaPredicted RBP9.63□□□□□ -0.87
VPS33B-206ENST00000557358 ZNF876PQ49A33 203 aa9.63□□□□□ -0.87
VPS33B-206ENST00000557358 TTC32Q5I0X7 151 aa9.63□□□□□ -0.87
VPS33B-206ENST00000557358 FAM162BQ5T6X4 162 aa9.63□□□□□ -0.87
VPS33B-206ENST00000557358 SMIM7Q9BQ49 75 aa9.63□□□□□ -0.87
VPS33B-206ENST00000557358 TMEM218A2RU14 115 aa9.62□□□□□ -0.87
VPS33B-206ENST00000557358 ZNF727A8MUV8 499 aa9.62□□□□□ -0.87
VPS33B-206ENST00000557358 SRIP30626 198 aa9.62□□□□□ -0.87
VPS33B-206ENST00000557358 GNG4P50150 75 aa9.62□□□□□ -0.87
VPS33B-206ENST00000557358 FAM74A3Q4VXF1 159 aa9.62□□□□□ -0.87
VPS33B-206ENST00000557358 CENPWQ5EE01 88 aa9.62□□□□□ -0.87
VPS33B-206ENST00000557358 LINC00588Q9Y4M8 146 aa9.62□□□□□ -0.87
VPS33B-206ENST00000557358 VPS13DQ5THJ4 4388 aa9.62□□□□□ -0.87
VPS33B-206ENST00000557358 B4DEV8 164 aa9.61□□□□□ -0.87
VPS33B-206ENST00000557358 LTAP01374 205 aa9.61□□□□□ -0.87
VPS33B-206ENST00000557358 CRYBA4P53673 196 aa9.61□□□□□ -0.87
VPS33B-206ENST00000557358 FHL2Q14192 279 aa9.61□□□□□ -0.87
VPS33B-206ENST00000557358 C1orf134Q5TEV5 83 aa9.61□□□□□ -0.87
VPS33B-206ENST00000557358 SH2D6Q7Z4S9 175 aa9.61□□□□□ -0.87
VPS33B-206ENST00000557358 BAGE2Q86Y30 109 aa9.61□□□□□ -0.87
VPS33B-206ENST00000557358 VSIG2Q96IQ7 327 aa9.61□□□□□ -0.87
VPS33B-206ENST00000557358 Q9H8V8 135 aa9.61□□□□□ -0.87
VPS33B-206ENST00000557358 TRBV20OR9-2A0A075B6H5 130 aa9.6□□□□□ -0.87
VPS33B-206ENST00000557358 A0A096LPF7 62 aa9.6□□□□□ -0.87
VPS33B-206ENST00000557358 F8W036 122 aa9.6□□□□□ -0.87
VPS33B-206ENST00000557358 NEGR1Q7Z3B1 354 aa9.6□□□□□ -0.87
VPS33B-206ENST00000557358 SYT8Q8NBV8 401 aa9.6□□□□□ -0.87
VPS33B-206ENST00000557358 ZNRF2Q8NHG8 242 aa9.6□□□□□ -0.87
VPS33B-206ENST00000557358 SMIM12Q96EX1 92 aa9.6□□□□□ -0.87
VPS33B-206ENST00000557358 ZNF479Q96JC4 524 aa9.6□□□□□ -0.87
VPS33B-206ENST00000557358 PRADC1Q9BSG0 188 aa9.6□□□□□ -0.87
VPS33B-206ENST00000557358 SEC11CQ9BY50 192 aa9.6□□□□□ -0.87
VPS33B-206ENST00000557358 MRPS16Q9Y3D3 137 aaKnown RBP9.6□□□□□ -0.87
VPS33B-206ENST00000557358 DNAH6Q9C0G6 4158 aa9.6□□□□□ -0.87
VPS33B-206ENST00000557358 NBDYA0A0U1RRE5 68 aa9.59□□□□□ -0.87
VPS33B-206ENST00000557358 ADCYAP1P18509 176 aa9.59□□□□□ -0.87
VPS33B-206ENST00000557358 ESRGQ1W209 222 aa9.59□□□□□ -0.87
VPS33B-206ENST00000557358 COX8CQ7Z4L0 72 aa9.59□□□□□ -0.87
VPS33B-206ENST00000557358 NHLRC2Q8NBF2 726 aa9.59□□□□□ -0.87
VPS33B-206ENST00000557358 PTH2Q96A98 100 aa9.59□□□□□ -0.87
VPS33B-206ENST00000557358 C9orf85Q96MD7 179 aa9.59□□□□□ -0.87
VPS33B-206ENST00000557358 UPK3BQ9BT76 320 aa9.59□□□□□ -0.87
VPS33B-206ENST00000557358 NAT8Q9UHE5 227 aa9.59□□□□□ -0.87
VPS33B-206ENST00000557358 PGPEP1LA6NFU8 196 aa9.58□□□□□ -0.88
VPS33B-206ENST00000557358 A8MWV9 139 aa9.58□□□□□ -0.88
VPS33B-206ENST00000557358 KRBOX1C9JBD0 128 aa9.58□□□□□ -0.88
VPS33B-206ENST00000557358 M0R036 132 aa9.58□□□□□ -0.88
VPS33B-206ENST00000557358 SH2D1AO60880 128 aa9.58□□□□□ -0.88
VPS33B-206ENST00000557358 GYPEP15421 78 aa9.58□□□□□ -0.88
VPS33B-206ENST00000557358 TMEM241Q24JQ0 296 aa9.58□□□□□ -0.88
VPS33B-206ENST00000557358 PIK3CD-AS1Q5SR53 167 aa9.58□□□□□ -0.88
VPS33B-206ENST00000557358 Q6ZR54 194 aa9.58□□□□□ -0.88
VPS33B-206ENST00000557358 ZC2HC1AQ96GY0 325 aa9.58□□□□□ -0.88
VPS33B-206ENST00000557358 MLST8Q9BVC4 326 aa9.58□□□□□ -0.88
VPS33B-206ENST00000557358 IL36BQ9NZH7 164 aa9.58□□□□□ -0.88
VPS33B-206ENST00000557358 C11orf21Q9P2W6 132 aa9.58□□□□□ -0.88
VPS33B-206ENST00000557358 LY96Q9Y6Y9 160 aa9.58□□□□□ -0.88
VPS33B-206ENST00000557358 PRSS29PA6NIE9 313 aa9.57□□□□□ -0.88
VPS33B-206ENST00000557358 IGLV2-8P01709 118 aa9.57□□□□□ -0.88
VPS33B-206ENST00000557358 MGST1P10620 155 aaKnown RBP9.57□□□□□ -0.88
VPS33B-206ENST00000557358 CARHSP1Q9Y2V2 147 aaKnown RBP9.57□□□□□ -0.88
VPS33B-206ENST00000557358 PHLDA3Q9Y5J5 127 aa9.57□□□□□ -0.88
VPS33B-206ENST00000557358 IGKV3D-20A0A0C4DH25 116 aa9.56□□□□□ -0.88
VPS33B-206ENST00000557358 A0A1W2PPQ1 181 aa9.56□□□□□ -0.88
VPS33B-206ENST00000557358 H3BVH4 76 aa9.56□□□□□ -0.88
VPS33B-206ENST00000557358 K7EQD1 137 aa9.56□□□□□ -0.88
VPS33B-206ENST00000557358 RS1O15537 224 aa9.56□□□□□ -0.88
VPS33B-206ENST00000557358 RNASE3P12724 160 aaKnown RBP9.56□□□□□ -0.88
VPS33B-206ENST00000557358 RHOHQ15669 191 aa9.56□□□□□ -0.88
VPS33B-206ENST00000557358 ADIRFQ15847 76 aa9.56□□□□□ -0.88
VPS33B-206ENST00000557358 C10orf91Q5T1B1 145 aa9.56□□□□□ -0.88
VPS33B-206ENST00000557358 PRR27Q6MZM9 219 aa9.56□□□□□ -0.88
VPS33B-206ENST00000557358 LINC01551Q86U37 167 aa9.56□□□□□ -0.88
VPS33B-206ENST00000557358 C6orf223Q8N319 242 aa9.56□□□□□ -0.88
VPS33B-206ENST00000557358 OCC1Q8TAD7 63 aa9.56□□□□□ -0.88
VPS33B-206ENST00000557358 BIN3Q9NQY0 253 aa9.56□□□□□ -0.88
VPS33B-206ENST00000557358 TRAV9-2A0A087WT02 112 aa9.55□□□□□ -0.88
VPS33B-206ENST00000557358 K7EN84 100 aa9.55□□□□□ -0.88
VPS33B-206ENST00000557358 RHODO00212 210 aa9.55□□□□□ -0.88
VPS33B-206ENST00000557358 SIVA1O15304 175 aa9.55□□□□□ -0.88
VPS33B-206ENST00000557358 GATA1P15976 413 aaPredicted RBP9.55□□□□□ -0.88
VPS33B-206ENST00000557358 RPL23P62829 140 aaKnown RBP9.55□□□□□ -0.88
VPS33B-206ENST00000557358 PNRC1Q12796 327 aaPredicted RBP9.55□□□□□ -0.88
VPS33B-206ENST00000557358 LINC01559Q495D7 138 aa9.55□□□□□ -0.88
VPS33B-206ENST00000557358 CFAP126Q5VTH2 177 aa9.55□□□□□ -0.88
VPS33B-206ENST00000557358 DAZAP1Q96EP5 407 aaKnown RBP9.55□□□□□ -0.88
VPS33B-206ENST00000557358 TMSB15BA0A087X1C1 80 aa9.54□□□□□ -0.88
VPS33B-206ENST00000557358 TRBV6-4A0A1B0GX49 114 aa9.54□□□□□ -0.88
VPS33B-206ENST00000557358 NXPH4O95158 308 aa9.54□□□□□ -0.88
VPS33B-206ENST00000557358 ARMS2P0C7Q2 107 aa9.54□□□□□ -0.88
VPS33B-206ENST00000557358 BTF3P20290 206 aaKnown RBP9.54□□□□□ -0.88
VPS33B-206ENST00000557358 DNLZQ5SXM8 178 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms