RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 GATA1P15976 413 aaPredicted RBP11.31□□□□□ -0.6
VSX1-207ENST00000557285 ASIPP42127 132 aa11.31□□□□□ -0.6
VSX1-207ENST00000557285 AKR1C3P42330 323 aa11.31□□□□□ -0.6
VSX1-207ENST00000557285 TMUB2Q71RG4 321 aa11.31□□□□□ -0.6
VSX1-207ENST00000557285 WFDC10BQ8IUB3 73 aa11.31□□□□□ -0.6
VSX1-207ENST00000557285 TNFRSF18Q9Y5U5 241 aa11.31□□□□□ -0.6
VSX1-207ENST00000557285 TMSB15BA0A087X1C1 80 aa11.3□□□□□ -0.6
VSX1-207ENST00000557285 H3BVH4 76 aa11.3□□□□□ -0.6
VSX1-207ENST00000557285 SH2D1AO60880 128 aa11.3□□□□□ -0.6
VSX1-207ENST00000557285 MED14OSP0DP75 135 aa11.3□□□□□ -0.6
VSX1-207ENST00000557285 LGALSLQ3ZCW2 172 aaPredicted RBP11.3□□□□□ -0.6
VSX1-207ENST00000557285 SLC25A29Q8N8R3 303 aa11.3□□□□□ -0.6
VSX1-207ENST00000557285 FMC1Q96HJ9 113 aa11.3□□□□□ -0.6
VSX1-207ENST00000557285 GRIFINA4D1Z8 144 aa11.29□□□□□ -0.6
VSX1-207ENST00000557285 UMAD1C9J7I0 102 aa11.29□□□□□ -0.6
VSX1-207ENST00000557285 CRIP1P50238 77 aa11.29□□□□□ -0.6
VSX1-207ENST00000557285 SPATA12Q7Z6I5 190 aa11.29□□□□□ -0.6
VSX1-207ENST00000557285 ZFP30Q9Y2G7 519 aa11.29□□□□□ -0.6
VSX1-207ENST00000557285 LY96Q9Y6Y9 160 aa11.29□□□□□ -0.6
VSX1-207ENST00000557285 FAM162BQ5T6X4 162 aa11.28□□□□□ -0.6
VSX1-207ENST00000557285 PRADC1Q9BSG0 188 aa11.28□□□□□ -0.6
VSX1-207ENST00000557285 SCO2A0A1W2PP80 73 aa11.27□□□□□ -0.61
VSX1-207ENST00000557285 KRBOX1C9JBD0 128 aa11.27□□□□□ -0.61
VSX1-207ENST00000557285 H2AFB1P0C5Y9 115 aa11.27□□□□□ -0.61
VSX1-207ENST00000557285 TPT1P13693 172 aaKnown RBP11.27□□□□□ -0.61
VSX1-207ENST00000557285 EIF5AP63241 154 aaKnown RBP11.27□□□□□ -0.61
VSX1-207ENST00000557285 RHOHQ15669 191 aa11.27□□□□□ -0.61
VSX1-207ENST00000557285 MBD3L1Q8WWY6 194 aa11.27□□□□□ -0.61
VSX1-207ENST00000557285 JPT2Q9H910 190 aa11.27□□□□□ -0.61
VSX1-207ENST00000557285 TRAV9-2A0A087WT02 112 aa11.26□□□□□ -0.61
VSX1-207ENST00000557285 LTAP01374 205 aa11.26□□□□□ -0.61
VSX1-207ENST00000557285 Q6ZSN1 163 aa11.26□□□□□ -0.61
VSX1-207ENST00000557285 TCEAL7Q9BRU2 100 aa11.26□□□□□ -0.61
VSX1-207ENST00000557285 PARLQ9H300 379 aa11.26□□□□□ -0.61
VSX1-207ENST00000557285 ARMS2P0C7Q2 107 aa11.25□□□□□ -0.61
VSX1-207ENST00000557285 EVI2AP22794 236 aa11.25□□□□□ -0.61
VSX1-207ENST00000557285 SH2D6Q7Z4S9 175 aa11.25□□□□□ -0.61
VSX1-207ENST00000557285 PTH2Q96A98 100 aa11.25□□□□□ -0.61
VSX1-207ENST00000557285 SAMD10Q9BYL1 202 aa11.25□□□□□ -0.61
VSX1-207ENST00000557285 IL36BQ9NZH7 164 aa11.25□□□□□ -0.61
VSX1-207ENST00000557285 TRBV6-4A0A1B0GX49 114 aa11.24□□□□□ -0.61
VSX1-207ENST00000557285 A8MWV9 139 aa11.24□□□□□ -0.61
VSX1-207ENST00000557285 M0R381 172 aa11.24□□□□□ -0.61
VSX1-207ENST00000557285 MGST1P10620 155 aaKnown RBP11.24□□□□□ -0.61
VSX1-207ENST00000557285 FUSP35637 526 aaKnown RBP eCLIP11.24□□□□□ -0.61
VSX1-207ENST00000557285 OR10J3Q5JRS4 329 aa11.24□□□□□ -0.61
VSX1-207ENST00000557285 DMRTA1Q5VZB9 504 aa11.24□□□□□ -0.61
VSX1-207ENST00000557285 SYT8Q8NBV8 401 aa11.24□□□□□ -0.61
VSX1-207ENST00000557285 GNG13Q9P2W3 67 aa11.24□□□□□ -0.61
VSX1-207ENST00000557285 TRBV6-1A0A0K0K1D8 114 aa11.23□□□□□ -0.61
VSX1-207ENST00000557285 GAGE12JA6NER3 117 aa11.23□□□□□ -0.61
VSX1-207ENST00000557285 CIDEAO60543 219 aa11.23□□□□□ -0.61
VSX1-207ENST00000557285 CRYGDP07320 174 aa11.23□□□□□ -0.61
VSX1-207ENST00000557285 BTF3P20290 206 aaKnown RBP11.23□□□□□ -0.61
VSX1-207ENST00000557285 KRTAP10-2P60368 255 aa11.23□□□□□ -0.61
VSX1-207ENST00000557285 CCL20P78556 96 aa11.23□□□□□ -0.61
VSX1-207ENST00000557285 GAGE1Q13065 139 aa11.23□□□□□ -0.61
VSX1-207ENST00000557285 GAGE4Q13068 117 aa11.23□□□□□ -0.61
VSX1-207ENST00000557285 GAGE5Q13069 117 aa11.23□□□□□ -0.61
VSX1-207ENST00000557285 ZNF674Q2M3X9 581 aa11.23□□□□□ -0.61
VSX1-207ENST00000557285 GAGE13Q4V321 117 aa11.23□□□□□ -0.61
VSX1-207ENST00000557285 FAM74A4Q5TZK3 123 aa11.23□□□□□ -0.61
VSX1-207ENST00000557285 Q6ZRN7 208 aaPredicted RBP11.23□□□□□ -0.61
VSX1-207ENST00000557285 MSRB1Q9NZV6 116 aa11.23□□□□□ -0.61
VSX1-207ENST00000557285 PHLDA3Q9Y5J5 127 aa11.23□□□□□ -0.61
VSX1-207ENST00000557285 PCLOQ9Y6V0 5065 aa11.23□□□□□ -0.61
VSX1-207ENST00000557285 RYR1P21817 5038 aa11.22□□□□□ -0.61
VSX1-207ENST00000557285 hCG_2014768A0A024R1R8 64 aa11.22□□□□□ -0.61
VSX1-207ENST00000557285 A0A087WWL8 130 aa11.22□□□□□ -0.61
VSX1-207ENST00000557285 DNAH10OSP0CZ25 163 aa11.22□□□□□ -0.61
VSX1-207ENST00000557285 LINC01559Q495D7 138 aa11.22□□□□□ -0.61
VSX1-207ENST00000557285 PRR27Q6MZM9 219 aa11.22□□□□□ -0.61
VSX1-207ENST00000557285 COX8CQ7Z4L0 72 aa11.22□□□□□ -0.61
VSX1-207ENST00000557285 C14orf178Q8N769 122 aaPredicted RBP11.22□□□□□ -0.61
VSX1-207ENST00000557285 ATP6V0E2Q8NHE4 81 aa11.22□□□□□ -0.61
VSX1-207ENST00000557285 TRAV8-6A0A0B4J262 113 aa11.21□□□□□ -0.61
VSX1-207ENST00000557285 IGHV3-38A0A0C4DH36 116 aa11.21□□□□□ -0.61
VSX1-207ENST00000557285 RPL19P84098 196 aaKnown RBP11.21□□□□□ -0.61
VSX1-207ENST00000557285 NFE4Q86UQ8 179 aa11.21□□□□□ -0.61
VSX1-207ENST00000557285 BAGE2Q86Y30 109 aa11.21□□□□□ -0.61
VSX1-207ENST00000557285 LRP1BQ9NZR2 4599 aa11.21□□□□□ -0.62
VSX1-207ENST00000557285 IGHV3-30P01768 117 aa11.2□□□□□ -0.62
VSX1-207ENST00000557285 IGHV3-33P01772 117 aa11.2□□□□□ -0.62
VSX1-207ENST00000557285 S100A9P06702 114 aaKnown RBP11.2□□□□□ -0.62
VSX1-207ENST00000557285 IGHV3-30-3P0DP02 117 aa11.2□□□□□ -0.62
VSX1-207ENST00000557285 IGHV3-30-5P0DP03 117 aa11.2□□□□□ -0.62
VSX1-207ENST00000557285 ERVFC1-1P60608 527 aa11.2□□□□□ -0.62
VSX1-207ENST00000557285 ZFP2Q6ZN57 461 aa11.2□□□□□ -0.62
VSX1-207ENST00000557285 TCTE3Q8IZS6 198 aa11.2□□□□□ -0.62
VSX1-207ENST00000557285 Q9UF83 564 aa11.2□□□□□ -0.62
VSX1-207ENST00000557285 TIRAPP58753 221 aa11.19□□□□□ -0.62
VSX1-207ENST00000557285 SSTP61278 116 aa11.19□□□□□ -0.62
VSX1-207ENST00000557285 DNLZQ5SXM8 178 aa11.19□□□□□ -0.62
VSX1-207ENST00000557285 EIF5AL1Q6IS14 154 aaKnown RBP11.19□□□□□ -0.62
VSX1-207ENST00000557285 DERL1Q9BUN8 251 aa11.19□□□□□ -0.62
VSX1-207ENST00000557285 KRTAP17-1Q9BYP8 105 aa11.19□□□□□ -0.62
VSX1-207ENST00000557285 GTSF1LQ9H1H1 148 aa11.19□□□□□ -0.62
VSX1-207ENST00000557285 MANBALQ9NQG1 85 aa11.19□□□□□ -0.62
VSX1-207ENST00000557285 MUC21A0A0G2JKD1 596 aa11.18□□□□□ -0.62
VSX1-207ENST00000557285 MUC21A0A140T8X8 626 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms