RNA–Protein interactions for RNA: ENST00000557005.1

SYNE2-223, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-223ENST00000557005 FAM236AA0A1B0GUQ0 79 aa3.82□□□□□ -1.8
SYNE2-223ENST00000557005 FAM236BA0A1B0GV22 79 aa3.82□□□□□ -1.8
SYNE2-223ENST00000557005 BAALC-AS2P0C853 105 aa3.82□□□□□ -1.8
SYNE2-223ENST00000557005 ZFP36P26651 326 aaKnown RBP3.82□□□□□ -1.8
SYNE2-223ENST00000557005 PFN2P35080 140 aa3.82□□□□□ -1.8
SYNE2-223ENST00000557005 S100A7L2Q5SY68 101 aa3.82□□□□□ -1.8
SYNE2-223ENST00000557005 CEMP1Q6PRD7 247 aaPredicted RBP3.82□□□□□ -1.8
SYNE2-223ENST00000557005 MAPK1IP1LQ8NDC0 245 aa3.82□□□□□ -1.8
SYNE2-223ENST00000557005 ZNRF2Q8NHG8 242 aa3.82□□□□□ -1.8
SYNE2-223ENST00000557005 OVOL2Q9BRP0 275 aa3.82□□□□□ -1.8
SYNE2-223ENST00000557005 KIAA1549Q9HCM3 1950 aa3.81□□□□□ -1.8
SYNE2-223ENST00000557005 CCDC179H3BU77 68 aa3.81□□□□□ -1.8
SYNE2-223ENST00000557005 MRPL23Q16540 153 aaKnown RBP3.81□□□□□ -1.8
SYNE2-223ENST00000557005 LINC01620Q4KN68 170 aa3.81□□□□□ -1.8
SYNE2-223ENST00000557005 IGFL3Q6UXB1 125 aa3.81□□□□□ -1.8
SYNE2-223ENST00000557005 MYO7AQ13402 2215 aa3.81□□□□□ -1.8
SYNE2-223ENST00000557005 LGALS9O00182 355 aa3.81□□□□□ -1.8
SYNE2-223ENST00000557005 RHODO00212 210 aa3.81□□□□□ -1.8
SYNE2-223ENST00000557005 BUB3O43684 328 aa3.81□□□□□ -1.8
SYNE2-223ENST00000557005 UCNP55089 124 aa3.81□□□□□ -1.8
SYNE2-223ENST00000557005 PIFOQ8TCI5 191 aa3.81□□□□□ -1.8
SYNE2-223ENST00000557005 LAMTOR3Q9UHA4 124 aa3.81□□□□□ -1.8
SYNE2-223ENST00000557005 P0DMU3 169 aa3.81□□□□□ -1.8
SYNE2-223ENST00000557005 FAM231AP0DMU4 169 aa3.81□□□□□ -1.8
SYNE2-223ENST00000557005 FAM231CP0DMU5 169 aa3.81□□□□□ -1.8
SYNE2-223ENST00000557005 CGB3P0DN86 165 aa3.81□□□□□ -1.8
SYNE2-223ENST00000557005 CGB7P0DN87 165 aa3.81□□□□□ -1.8
SYNE2-223ENST00000557005 HTN3P15516 51 aa3.81□□□□□ -1.8
SYNE2-223ENST00000557005 NDUFV3P56181 108 aaKnown RBP3.81□□□□□ -1.8
SYNE2-223ENST00000557005 CCDC140Q96MF4 163 aa3.81□□□□□ -1.8
SYNE2-223ENST00000557005 SPRY4Q9C004 299 aa3.81□□□□□ -1.8
SYNE2-223ENST00000557005 Q9H8V8 135 aa3.81□□□□□ -1.8
SYNE2-223ENST00000557005 XCL2Q9UBD3 114 aa3.81□□□□□ -1.8
SYNE2-223ENST00000557005 A0A0J9YXV3 536 aa3.81□□□□□ -1.8
SYNE2-223ENST00000557005 TRBV10-2A0A0K0K1G8 114 aa3.81□□□□□ -1.8
SYNE2-223ENST00000557005 RHOHQ15669 191 aa3.81□□□□□ -1.8
SYNE2-223ENST00000557005 CLPSL2Q6UWE3 100 aa3.81□□□□□ -1.8
SYNE2-223ENST00000557005 TM2D2Q9BX73 214 aa3.81□□□□□ -1.8
SYNE2-223ENST00000557005 PRB1P04280 392 aa3.8□□□□□ -1.8
SYNE2-223ENST00000557005 IGFL2Q6UWQ7 119 aa3.8□□□□□ -1.8
SYNE2-223ENST00000557005 IGKV3D-7A0A0C4DH55 119 aa3.8□□□□□ -1.8
SYNE2-223ENST00000557005 LINC01548A6NM66 108 aa3.8□□□□□ -1.8
SYNE2-223ENST00000557005 HOXD3P31249 432 aaPredicted RBP3.8□□□□□ -1.8
SYNE2-223ENST00000557005 Q8N9W7 124 aa3.8□□□□□ -1.8
SYNE2-223ENST00000557005 LINC00574Q9H8X3 128 aa3.8□□□□□ -1.8
SYNE2-223ENST00000557005 LINC01619G3V211 115 aa3.8□□□□□ -1.8
SYNE2-223ENST00000557005 RPL36AP83881 106 aaKnown RBP3.8□□□□□ -1.8
SYNE2-223ENST00000557005 C5orf56Q8N8D9 126 aa3.8□□□□□ -1.8
SYNE2-223ENST00000557005 RPL36ALQ969Q0 106 aaKnown RBP3.8□□□□□ -1.8
SYNE2-223ENST00000557005 FANCD2OSQ96PS1 177 aa3.8□□□□□ -1.8
SYNE2-223ENST00000557005 DOCK11Q5JSL3 2073 aa3.8□□□□□ -1.8
SYNE2-223ENST00000557005 SOCS3O14543 225 aa3.8□□□□□ -1.8
SYNE2-223ENST00000557005 UNQ9165/PRO28630Q6UXU0 137 aa3.8□□□□□ -1.8
SYNE2-223ENST00000557005 APRG1Q8IVJ8 170 aa3.8□□□□□ -1.8
SYNE2-223ENST00000557005 ORMDL1Q9P0S3 153 aa3.8□□□□□ -1.8
SYNE2-223ENST00000557005 ABCA7Q8IZY2 2146 aa3.8□□□□□ -1.8
SYNE2-223ENST00000557005 TMEM223A0PJW6 202 aa3.8□□□□□ -1.8
SYNE2-223ENST00000557005 PF4P02776 101 aa3.8□□□□□ -1.8
SYNE2-223ENST00000557005 IGHV4-38-2P0DP08 117 aa3.8□□□□□ -1.8
SYNE2-223ENST00000557005 PRR9Q5T870 116 aa3.79□□□□□ -1.8
SYNE2-223ENST00000557005 Q8N1Y9 231 aa3.79□□□□□ -1.8
SYNE2-223ENST00000557005 MRAPQ8TCY5 172 aa3.79□□□□□ -1.8
SYNE2-223ENST00000557005 PCNTO95613 3336 aa3.79□□□□□ -1.8
SYNE2-223ENST00000557005 UNC13CQ8NB66 2214 aa3.79□□□□□ -1.8
SYNE2-223ENST00000557005 A0A096LPF7 62 aa3.79□□□□□ -1.8
SYNE2-223ENST00000557005 A0A0B4J2C4 111 aa3.79□□□□□ -1.8
SYNE2-223ENST00000557005 IGHV3-30P01768 117 aa3.79□□□□□ -1.8
SYNE2-223ENST00000557005 IGHV3-30-5P0DP03 117 aa3.79□□□□□ -1.8
SYNE2-223ENST00000557005 HERVK_113P63121 156 aa3.79□□□□□ -1.8
SYNE2-223ENST00000557005 NRACQ8N912 160 aa3.79□□□□□ -1.8
SYNE2-223ENST00000557005 MDFICQ9P1T7 246 aa3.79□□□□□ -1.8
SYNE2-223ENST00000557005 IGLV1-47P01700 117 aa3.79□□□□□ -1.8
SYNE2-223ENST00000557005 XGP55808 180 aa3.79□□□□□ -1.8
SYNE2-223ENST00000557005 DEFB136Q30KP8 78 aa3.79□□□□□ -1.8
SYNE2-223ENST00000557005 CENPVL3A0A0U1RRI6 287 aa3.79□□□□□ -1.8
SYNE2-223ENST00000557005 C10orf142B7Z368 130 aa3.79□□□□□ -1.8
SYNE2-223ENST00000557005 A0A0J9YXY3 114 aa3.78□□□□□ -1.8
SYNE2-223ENST00000557005 NXPH4O95158 308 aa3.78□□□□□ -1.8
SYNE2-223ENST00000557005 FSTL3O95633 263 aa3.78□□□□□ -1.8
SYNE2-223ENST00000557005 CFAP126Q5VTH2 177 aa3.78□□□□□ -1.8
SYNE2-223ENST00000557005 Q6ZS46 218 aa3.78□□□□□ -1.8
SYNE2-223ENST00000557005 TMEM86BQ8N661 226 aa3.78□□□□□ -1.8
SYNE2-223ENST00000557005 Q9HAA7 133 aa3.78□□□□□ -1.8
SYNE2-223ENST00000557005 C11orf21Q9P2W6 132 aa3.78□□□□□ -1.8
SYNE2-223ENST00000557005 ODF3BA8MYP8 253 aa3.78□□□□□ -1.8
SYNE2-223ENST00000557005 NCR3O14931 201 aa3.78□□□□□ -1.8
SYNE2-223ENST00000557005 SLURP1P55000 103 aa3.78□□□□□ -1.8
SYNE2-223ENST00000557005 TRAV13-2A0A0B4J235 113 aa3.78□□□□□ -1.8
SYNE2-223ENST00000557005 HERV-K104P63124 156 aa3.78□□□□□ -1.8
SYNE2-223ENST00000557005 C6orf226Q5I0X4 101 aa3.78□□□□□ -1.8
SYNE2-223ENST00000557005 AJUBAQ96IF1 538 aa3.78□□□□□ -1.8
SYNE2-223ENST00000557005 PCDH15Q96QU1 1955 aa3.78□□□□□ -1.8
SYNE2-223ENST00000557005 DOCK8Q8NF50 2099 aa3.78□□□□□ -1.8
SYNE2-223ENST00000557005 TRBV7-3A0A075B6L6 115 aa3.78□□□□□ -1.8
SYNE2-223ENST00000557005 LY6LH3BQJ8 138 aa3.78□□□□□ -1.8
SYNE2-223ENST00000557005 U3KQE9 123 aa3.78□□□□□ -1.8
SYNE2-223ENST00000557005 MRPS12O15235 138 aaKnown RBP3.78□□□□□ -1.8
SYNE2-223ENST00000557005 TRIAP1O43715 76 aa3.78□□□□□ -1.8
SYNE2-223ENST00000557005 TMEM263Q8WUH6 116 aaKnown RBP3.78□□□□□ -1.8
SYNE2-223ENST00000557005 A8MZ25 164 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms