RNA–Protein interactions for RNA: ENST00000556725.1

SYNE2-222, Transcript of spectrin repeat containing nuclear envelope protein 2, human

TSL 3

Gene SYNE2, Length 672 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNE2-222	ENST00000556725	LINC00694	P0DN24	101 aa		5.55	□□□□□ -1.52
SYNE2-222	ENST00000556725	SULT1A1	P50225	295 aa		5.55	□□□□□ -1.52
SYNE2-222	ENST00000556725	TMEM252	Q8N6L7	170 aa		5.55	□□□□□ -1.52
SYNE2-222	ENST00000556725	DEDD2	Q8WXF8	326 aa		5.55	□□□□□ -1.52
SYNE2-222	ENST00000556725	RMI2	Q96E14	147 aa		5.55	□□□□□ -1.52
SYNE2-222	ENST00000556725	HYLS1	Q96M11	299 aa		5.55	□□□□□ -1.52
SYNE2-222	ENST00000556725	SAMD10	Q9BYL1	202 aa		5.55	□□□□□ -1.52
SYNE2-222	ENST00000556725	SDF2L1	Q9HCN8	221 aa		5.55	□□□□□ -1.52
SYNE2-222	ENST00000556725	C11orf21	Q9P2W6	132 aa		5.55	□□□□□ -1.52
SYNE2-222	ENST00000556725	hCG_2014768	A0A024R1R8	64 aa		5.54	□□□□□ -1.52
SYNE2-222	ENST00000556725	TRAV8-1	A0A0A6YYK1	113 aa		5.54	□□□□□ -1.52
SYNE2-222	ENST00000556725	C9orf118	A6NHY6	69 aa		5.54	□□□□□ -1.52
SYNE2-222	ENST00000556725	CIDEA	O60543	219 aa		5.54	□□□□□ -1.52
SYNE2-222	ENST00000556725	EIF3G	O75821	320 aa	Known RBP eCLIP	5.54	□□□□□ -1.52
SYNE2-222	ENST00000556725	MGST1	P10620	155 aa	Known RBP	5.54	□□□□□ -1.52
SYNE2-222	ENST00000556725	BTC	P35070	178 aa		5.54	□□□□□ -1.52
SYNE2-222	ENST00000556725	INPP1	P49441	399 aa		5.54	□□□□□ -1.52
SYNE2-222	ENST00000556725	TMBIM6	P55061	237 aa		5.54	□□□□□ -1.52
SYNE2-222	ENST00000556725	ATP6V1F	Q16864	119 aa		5.54	□□□□□ -1.52
SYNE2-222	ENST00000556725	ZNF506	Q5JVG8	444 aa		5.54	□□□□□ -1.52
SYNE2-222	ENST00000556725	NIT1	Q86X76	327 aa		5.54	□□□□□ -1.52
SYNE2-222	ENST00000556725	OR2T35	Q8NGX2	323 aa		5.54	□□□□□ -1.52
SYNE2-222	ENST00000556725	THAP6	Q8TBB0	222 aa		5.54	□□□□□ -1.52
SYNE2-222	ENST00000556725	ASB13	Q8WXK3	278 aa		5.54	□□□□□ -1.52
SYNE2-222	ENST00000556725	UBE2W	Q96B02	151 aa		5.54	□□□□□ -1.52
SYNE2-222	ENST00000556725	BCL7B	Q9BQE9	202 aa		5.54	□□□□□ -1.52
SYNE2-222	ENST00000556725	MRPS26	Q9BYN8	205 aa	Known RBP	5.54	□□□□□ -1.52
SYNE2-222	ENST00000556725	LYRM2	Q9NU23	88 aa	Predicted RBP	5.54	□□□□□ -1.52
SYNE2-222	ENST00000556725	PGP	A6NDG6	321 aa		5.53	□□□□□ -1.52
SYNE2-222	ENST00000556725		H3BMQ9	156 aa		5.53	□□□□□ -1.52
SYNE2-222	ENST00000556725	OR7C2	O60412	319 aa		5.53	□□□□□ -1.52
SYNE2-222	ENST00000556725	ZNF80	P51504	273 aa	Predicted RBP	5.53	□□□□□ -1.52
SYNE2-222	ENST00000556725	NHLH2	Q02577	135 aa		5.53	□□□□□ -1.52
SYNE2-222	ENST00000556725	SPANXN2	Q5MJ10	180 aa		5.53	□□□□□ -1.52
SYNE2-222	ENST00000556725	C14orf178	Q8N769	122 aa	Predicted RBP	5.53	□□□□□ -1.52
SYNE2-222	ENST00000556725	CYB561D1	Q8N8Q1	229 aa		5.53	□□□□□ -1.52
SYNE2-222	ENST00000556725	TMEM75	Q8N9X5	138 aa		5.53	□□□□□ -1.52
SYNE2-222	ENST00000556725	TMED6	Q8WW62	240 aa		5.53	□□□□□ -1.52
SYNE2-222	ENST00000556725	KCNS1	Q96KK3	526 aa		5.53	□□□□□ -1.52
SYNE2-222	ENST00000556725	SGK494	Q96LW2	274 aa		5.53	□□□□□ -1.52
SYNE2-222	ENST00000556725	C9orf85	Q96MD7	179 aa		5.53	□□□□□ -1.52
SYNE2-222	ENST00000556725	ATP5S	Q99766	215 aa		5.53	□□□□□ -1.52
SYNE2-222	ENST00000556725	TREM1	Q9NP99	234 aa		5.53	□□□□□ -1.52
SYNE2-222	ENST00000556725	NAP1L6	A6NFF2	107 aa		5.52	□□□□□ -1.53
SYNE2-222	ENST00000556725	GAS8-AS1	O95177	125 aa		5.52	□□□□□ -1.53
SYNE2-222	ENST00000556725	PRSS1	P07477	247 aa		5.52	□□□□□ -1.53
SYNE2-222	ENST00000556725	RNASE3	P12724	160 aa	Known RBP	5.52	□□□□□ -1.53
SYNE2-222	ENST00000556725	S100A10	P60903	97 aa		5.52	□□□□□ -1.53
SYNE2-222	ENST00000556725	HBG1	P69891	147 aa		5.52	□□□□□ -1.53
SYNE2-222	ENST00000556725	HBG2	P69892	147 aa		5.52	□□□□□ -1.53
SYNE2-222	ENST00000556725	IL15RA	Q13261	267 aa		5.52	□□□□□ -1.53
SYNE2-222	ENST00000556725	RAB32	Q13637	225 aa		5.52	□□□□□ -1.53
SYNE2-222	ENST00000556725	ATRAID	Q6UW56	229 aa		5.52	□□□□□ -1.53
SYNE2-222	ENST00000556725	GOLT1A	Q6ZVE7	132 aa		5.52	□□□□□ -1.53
SYNE2-222	ENST00000556725	C2orf50	Q96LR7	162 aa		5.52	□□□□□ -1.53
SYNE2-222	ENST00000556725	LINC00479	Q96M42	142 aa		5.52	□□□□□ -1.53
SYNE2-222	ENST00000556725	NMES1	Q9C002	83 aa		5.52	□□□□□ -1.53
SYNE2-222	ENST00000556725	PARL	Q9H300	379 aa		5.52	□□□□□ -1.53
SYNE2-222	ENST00000556725	JPT2	Q9H910	190 aa		5.52	□□□□□ -1.53
SYNE2-222	ENST00000556725	URGCP-MRPS24	S4R325	110 aa		5.52	□□□□□ -1.53
SYNE2-222	ENST00000556725		A0A087WWC5	75 aa		5.51	□□□□□ -1.53
SYNE2-222	ENST00000556725	PVALB	P20472	110 aa	Predicted RBP	5.51	□□□□□ -1.53
SYNE2-222	ENST00000556725	GNG5	P63218	68 aa		5.51	□□□□□ -1.53
SYNE2-222	ENST00000556725	UBE2L3	P68036	154 aa	Known RBP	5.51	□□□□□ -1.53
SYNE2-222	ENST00000556725	ENHO	Q6UWT2	76 aa		5.51	□□□□□ -1.53
SYNE2-222	ENST00000556725	STX12	Q86Y82	276 aa		5.51	□□□□□ -1.53
SYNE2-222	ENST00000556725	C9orf163	Q8N9P6	203 aa		5.51	□□□□□ -1.53
SYNE2-222	ENST00000556725	SEC22C	Q9BRL7	303 aa		5.51	□□□□□ -1.53
SYNE2-222	ENST00000556725	SH3BGRL3	Q9H299	93 aa		5.51	□□□□□ -1.53
SYNE2-222	ENST00000556725	LPA	P08519	4548 aa		5.51	□□□□□ -1.53
SYNE2-222	ENST00000556725	USP17L23	D6RBM5	183 aa		5.5	□□□□□ -1.53
SYNE2-222	ENST00000556725	C14orf177	Q52M58	125 aa		5.5	□□□□□ -1.53
SYNE2-222	ENST00000556725	UFSP1	Q6NVU6	142 aa		5.5	□□□□□ -1.53
SYNE2-222	ENST00000556725	SDIM1	Q6ZPB5	146 aa		5.5	□□□□□ -1.53
SYNE2-222	ENST00000556725	OR5C1	Q8NGR4	320 aa		5.5	□□□□□ -1.53
SYNE2-222	ENST00000556725	PTH2	Q96A98	100 aa		5.5	□□□□□ -1.53
SYNE2-222	ENST00000556725	SDHC	Q99643	169 aa	Predicted RBP	5.5	□□□□□ -1.53
SYNE2-222	ENST00000556725	OTOR	Q9NRC9	128 aa		5.5	□□□□□ -1.53
SYNE2-222	ENST00000556725	NDUFA13	Q9P0J0	144 aa		5.5	□□□□□ -1.53
SYNE2-222	ENST00000556725	MBD2	Q9UBB5	411 aa		5.5	□□□□□ -1.53
SYNE2-222	ENST00000556725		A0A087WX48	190 aa		5.49	□□□□□ -1.53
SYNE2-222	ENST00000556725		A0A0D9SG52	128 aa		5.49	□□□□□ -1.53
SYNE2-222	ENST00000556725	SEC11B	P0C7V7	166 aa		5.49	□□□□□ -1.53
SYNE2-222	ENST00000556725	S100A5	P33763	92 aa		5.49	□□□□□ -1.53
SYNE2-222	ENST00000556725	FGF8	P55075	233 aa	Predicted RBP	5.49	□□□□□ -1.53
SYNE2-222	ENST00000556725	LGALSL	Q3ZCW2	172 aa	Predicted RBP	5.49	□□□□□ -1.53
SYNE2-222	ENST00000556725	TRIQK	Q629K1	86 aa		5.49	□□□□□ -1.53
SYNE2-222	ENST00000556725	ZFP2	Q6ZN57	461 aa		5.49	□□□□□ -1.53
SYNE2-222	ENST00000556725	CMTM2	Q8TAZ6	248 aa		5.49	□□□□□ -1.53
SYNE2-222	ENST00000556725	C1orf43	Q9BWL3	253 aa		5.49	□□□□□ -1.53
SYNE2-222	ENST00000556725	WDR61	Q9GZS3	305 aa	Known RBP	5.49	□□□□□ -1.53
SYNE2-222	ENST00000556725	TRAV6	A0A075B6T7	132 aa		5.48	□□□□□ -1.53
SYNE2-222	ENST00000556725		A8MWV9	139 aa		5.48	□□□□□ -1.53
SYNE2-222	ENST00000556725	TAAR5	O14804	337 aa		5.48	□□□□□ -1.53
SYNE2-222	ENST00000556725	GCG	P01275	180 aa		5.48	□□□□□ -1.53
SYNE2-222	ENST00000556725	HLA-DQA1	P01909	254 aa		5.48	□□□□□ -1.53
SYNE2-222	ENST00000556725		Q0VG73	95 aa		5.48	□□□□□ -1.53
SYNE2-222	ENST00000556725	ELOB	Q15370	118 aa		5.48	□□□□□ -1.53
SYNE2-222	ENST00000556725	CT83	Q5H943	113 aa		5.48	□□□□□ -1.53
SYNE2-222	ENST00000556725	FFAR4	Q5NUL3	377 aa		5.48	□□□□□ -1.53

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