RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 OTORQ9NRC9 128 aa3.33□□□□□ -1.88
ATXN3-243ENST00000556671 NAGKQ9UJ70 344 aa3.33□□□□□ -1.88
ATXN3-243ENST00000556671 YTHDF2Q9Y5A9 579 aaKnown RBP3.33□□□□□ -1.88
ATXN3-243ENST00000556671 MUC4Q99102 2169 aa3.33□□□□□ -1.88
ATXN3-243ENST00000556671 DEFB131BA0A096LNP1 70 aa3.32□□□□□ -1.88
ATXN3-243ENST00000556671 CTXND1A0A1B0GTU2 59 aa3.32□□□□□ -1.88
ATXN3-243ENST00000556671 C7orf71A4D174 169 aa3.32□□□□□ -1.88
ATXN3-243ENST00000556671 TMEM189A5PLL7 270 aa3.32□□□□□ -1.88
ATXN3-243ENST00000556671 NUPR2A6NF83 97 aa3.32□□□□□ -1.88
ATXN3-243ENST00000556671 ZNF705EA8MWA4 302 aaPredicted RBP3.32□□□□□ -1.88
ATXN3-243ENST00000556671 SNURFLB1AK76 121 aa3.32□□□□□ -1.88
ATXN3-243ENST00000556671 ZNF253O75346 499 aa3.32□□□□□ -1.88
ATXN3-243ENST00000556671 ZNF138P52744 262 aa3.32□□□□□ -1.88
ATXN3-243ENST00000556671 BTN1A1Q13410 526 aa3.32□□□□□ -1.88
ATXN3-243ENST00000556671 OR5I1Q13606 314 aa3.32□□□□□ -1.88
ATXN3-243ENST00000556671 PDE6HQ13956 83 aa3.32□□□□□ -1.88
ATXN3-243ENST00000556671 MUC21Q5SSG8 566 aa3.32□□□□□ -1.88
ATXN3-243ENST00000556671 EIF5AL1Q6IS14 154 aaKnown RBP3.32□□□□□ -1.88
ATXN3-243ENST00000556671 ZNF705AQ6ZN79 300 aaPredicted RBP3.32□□□□□ -1.88
ATXN3-243ENST00000556671 SSX7Q7RTT5 188 aa3.32□□□□□ -1.88
ATXN3-243ENST00000556671 PRNTQ86SH4 94 aa3.32□□□□□ -1.88
ATXN3-243ENST00000556671 LYPD1Q8N2G4 141 aa3.32□□□□□ -1.88
ATXN3-243ENST00000556671 TMEM256Q8N2U0 113 aa3.32□□□□□ -1.88
ATXN3-243ENST00000556671 Q8NAQ8 132 aa3.32□□□□□ -1.88
ATXN3-243ENST00000556671 Q8TAT8 98 aa3.32□□□□□ -1.88
ATXN3-243ENST00000556671 NOP10Q9NPE3 64 aaKnown RBP3.32□□□□□ -1.88
ATXN3-243ENST00000556671 CYTL1Q9NRR1 136 aa3.32□□□□□ -1.88
ATXN3-243ENST00000556671 TMEM167BQ9NRX6 74 aa3.32□□□□□ -1.88
ATXN3-243ENST00000556671 CELA1Q9UNI1 258 aa3.32□□□□□ -1.88
ATXN3-243ENST00000556671 PRKDCP78527 4128 aaKnown RBP3.32□□□□□ -1.88
ATXN3-243ENST00000556671 DNAH3Q8TD57 4116 aa3.32□□□□□ -1.88
ATXN3-243ENST00000556671 TRAV8-1A0A0A6YYK1 113 aa3.31□□□□□ -1.88
ATXN3-243ENST00000556671 TRAV10A0A0B4J240 114 aa3.31□□□□□ -1.88
ATXN3-243ENST00000556671 MAP1LC3B2A6NCE7 125 aa3.31□□□□□ -1.88
ATXN3-243ENST00000556671 C11orf94C9JXX5 98 aa3.31□□□□□ -1.88
ATXN3-243ENST00000556671 F5H768 121 aa3.31□□□□□ -1.88
ATXN3-243ENST00000556671 H7BYZ3 331 aa3.31□□□□□ -1.88
ATXN3-243ENST00000556671 CRXO43186 299 aaPredicted RBP3.31□□□□□ -1.88
ATXN3-243ENST00000556671 BCL2L11O43521 198 aa3.31□□□□□ -1.88
ATXN3-243ENST00000556671 STAG3L2P0CL84 134 aa3.31□□□□□ -1.88
ATXN3-243ENST00000556671 STAG3L3P0CL85 134 aa3.31□□□□□ -1.88
ATXN3-243ENST00000556671 TPT1P13693 172 aaKnown RBP3.31□□□□□ -1.88
ATXN3-243ENST00000556671 FHITP49789 147 aa3.31□□□□□ -1.88
ATXN3-243ENST00000556671 TAS2R60P59551 318 aa3.31□□□□□ -1.88
ATXN3-243ENST00000556671 FLI1Q01543 452 aaPredicted RBP3.31□□□□□ -1.88
ATXN3-243ENST00000556671 C12orf74Q32Q52 190 aa3.31□□□□□ -1.88
ATXN3-243ENST00000556671 SMUG1Q53HV7 270 aa3.31□□□□□ -1.88
ATXN3-243ENST00000556671 FAM159AQ6UWV7 190 aa3.31□□□□□ -1.88
ATXN3-243ENST00000556671 Q6ZQT7 251 aa3.31□□□□□ -1.88
ATXN3-243ENST00000556671 NOTCH2NLQ7Z3S9 236 aa3.31□□□□□ -1.88
ATXN3-243ENST00000556671 MRPL53Q96EL3 112 aaKnown RBP3.31□□□□□ -1.88
ATXN3-243ENST00000556671 NDFIP1Q9BT67 221 aa3.31□□□□□ -1.88
ATXN3-243ENST00000556671 MAP1LC3BQ9GZQ8 125 aa3.31□□□□□ -1.88
ATXN3-243ENST00000556671 C11orf68Q9H3H3 251 aaKnown RBP3.31□□□□□ -1.88
ATXN3-243ENST00000556671 TREM1Q9NP99 234 aa3.31□□□□□ -1.88
ATXN3-243ENST00000556671 ZNF492Q9P255 531 aa3.31□□□□□ -1.88
ATXN3-243ENST00000556671 TIMM8BQ9Y5J9 83 aaPredicted RBP3.31□□□□□ -1.88
ATXN3-243ENST00000556671 TRGV2A0A075B6R0 118 aa3.3□□□□□ -1.88
ATXN3-243ENST00000556671 TRGV1A0A0A0MS02 117 aa3.3□□□□□ -1.88
ATXN3-243ENST00000556671 SMIM1B2RUZ4 78 aa3.3□□□□□ -1.88
ATXN3-243ENST00000556671 F6UZH7 168 aa3.3□□□□□ -1.88
ATXN3-243ENST00000556671 GNRH2O43555 120 aa3.3□□□□□ -1.88
ATXN3-243ENST00000556671 SEC11BP0C7V7 166 aa3.3□□□□□ -1.88
ATXN3-243ENST00000556671 PPT1P50897 306 aa3.3□□□□□ -1.88
ATXN3-243ENST00000556671 UBE2G1P62253 170 aa3.3□□□□□ -1.88
ATXN3-243ENST00000556671 ZNF726P1Q15940 193 aa3.3□□□□□ -1.88
ATXN3-243ENST00000556671 TMEM183BQ1AE95 376 aa3.3□□□□□ -1.88
ATXN3-243ENST00000556671 UBE2DNLQ8IWF7 75 aa3.3□□□□□ -1.88
ATXN3-243ENST00000556671 TMEM183AQ8IXX5 376 aa3.3□□□□□ -1.88
ATXN3-243ENST00000556671 SVBPQ8N300 66 aa3.3□□□□□ -1.88
ATXN3-243ENST00000556671 C16orf74Q96GX8 76 aa3.3□□□□□ -1.88
ATXN3-243ENST00000556671 LINC00479Q96M42 142 aa3.3□□□□□ -1.88
ATXN3-243ENST00000556671 ATG101Q9BSB4 218 aa3.3□□□□□ -1.88
ATXN3-243ENST00000556671 GSN-AS1Q9NRJ2 163 aa3.3□□□□□ -1.88
ATXN3-243ENST00000556671 TP53TG3Q9ULZ0 132 aa3.3□□□□□ -1.88
ATXN3-243ENST00000556671 EPDR1Q9UM22 224 aa3.3□□□□□ -1.88
ATXN3-243ENST00000556671 PSG8Q9UQ74 426 aa3.3□□□□□ -1.88
ATXN3-243ENST00000556671 STAB2Q8WWQ8 2551 aa3.3□□□□□ -1.88
ATXN3-243ENST00000556671 IGHV4-4A0A075B6R2 117 aa3.29□□□□□ -1.88
ATXN3-243ENST00000556671 IGHV1OR15-1A0A075B7D0 117 aa3.29□□□□□ -1.88
ATXN3-243ENST00000556671 A0A0J9YY99 117 aa3.29□□□□□ -1.88
ATXN3-243ENST00000556671 TEX48A0A1B0GUV7 120 aa3.29□□□□□ -1.88
ATXN3-243ENST00000556671 RBAKDNA6NC62 111 aa3.29□□□□□ -1.88
ATXN3-243ENST00000556671 LYRM9A8MSI8 78 aa3.29□□□□□ -1.88
ATXN3-243ENST00000556671 A8MTW9 85 aa3.29□□□□□ -1.88
ATXN3-243ENST00000556671 UMAD1C9J7I0 102 aa3.29□□□□□ -1.88
ATXN3-243ENST00000556671 IGHV3-53P01767 116 aa3.29□□□□□ -1.88
ATXN3-243ENST00000556671 ORM1P02763 201 aa3.29□□□□□ -1.88
ATXN3-243ENST00000556671 TCRAP04437 139 aa3.29□□□□□ -1.88
ATXN3-243ENST00000556671 ATP5G1P05496 136 aa3.29□□□□□ -1.88
ATXN3-243ENST00000556671 ATP5G3P48201 142 aa3.29□□□□□ -1.88
ATXN3-243ENST00000556671 SSTP61278 116 aa3.29□□□□□ -1.88
ATXN3-243ENST00000556671 S100A12P80511 92 aa3.29□□□□□ -1.88
ATXN3-243ENST00000556671 C10orf91Q5T1B1 145 aa3.29□□□□□ -1.88
ATXN3-243ENST00000556671 PRR9Q5T870 116 aa3.29□□□□□ -1.88
ATXN3-243ENST00000556671 ALKAL2Q6UX46 152 aa3.29□□□□□ -1.88
ATXN3-243ENST00000556671 ZNF493Q6ZR52 646 aa3.29□□□□□ -1.88
ATXN3-243ENST00000556671 C5orf17Q8NAS9 161 aa3.29□□□□□ -1.88
ATXN3-243ENST00000556671 TMEM263Q8WUH6 116 aaKnown RBP3.29□□□□□ -1.88
ATXN3-243ENST00000556671 C20orf144Q9BQM9 153 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms