RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 DOPEY1Q5JWR5 2465 aa3.96□□□□□ -1.77
TMEM260-210ENST00000556422 LOC107984156A0A0G2JMH3 177 aa3.96□□□□□ -1.78
TMEM260-210ENST00000556422 NDUFS7O75251 213 aa3.96□□□□□ -1.78
TMEM260-210ENST00000556422 GP9P14770 177 aa3.96□□□□□ -1.78
TMEM260-210ENST00000556422 GATA1P15976 413 aaPredicted RBP3.96□□□□□ -1.78
TMEM260-210ENST00000556422 COX7A1P24310 79 aa3.96□□□□□ -1.78
TMEM260-210ENST00000556422 UBE2E1P51965 193 aa3.96□□□□□ -1.78
TMEM260-210ENST00000556422 ARL17AQ8IVW1 177 aa3.96□□□□□ -1.78
TMEM260-210ENST00000556422 AMN1Q8IY45 258 aa3.96□□□□□ -1.78
TMEM260-210ENST00000556422 MMD2Q8IY49 270 aa3.96□□□□□ -1.78
TMEM260-210ENST00000556422 FAM167A-AS1Q96KT0 104 aa3.96□□□□□ -1.78
TMEM260-210ENST00000556422 UBE2E2Q96LR5 201 aa3.96□□□□□ -1.78
TMEM260-210ENST00000556422 FBN2P35556 2912 aa3.96□□□□□ -1.78
TMEM260-210ENST00000556422 APELAP0DMC3 54 aa3.96□□□□□ -1.78
TMEM260-210ENST00000556422 ERHP84090 104 aaKnown RBP3.96□□□□□ -1.78
TMEM260-210ENST00000556422 PATE2Q6UY27 113 aa3.96□□□□□ -1.78
TMEM260-210ENST00000556422 TEN1Q86WV5 123 aa3.96□□□□□ -1.78
TMEM260-210ENST00000556422 CEND1Q8N111 149 aa3.96□□□□□ -1.78
TMEM260-210ENST00000556422 RNF182Q8N6D2 247 aa3.96□□□□□ -1.78
TMEM260-210ENST00000556422 C11orf52Q96A22 123 aa3.96□□□□□ -1.78
TMEM260-210ENST00000556422 LINC00479Q96M42 142 aa3.96□□□□□ -1.78
TMEM260-210ENST00000556422 TXNDC17Q9BRA2 123 aa3.96□□□□□ -1.78
TMEM260-210ENST00000556422 AP5S1Q9NUS5 200 aa3.96□□□□□ -1.78
TMEM260-210ENST00000556422 CREBBPQ92793 2442 aa3.96□□□□□ -1.78
TMEM260-210ENST00000556422 NBPF19A0A087WUL8 3843 aa3.96□□□□□ -1.78
TMEM260-210ENST00000556422 FAM181BA6NEQ2 426 aa3.95□□□□□ -1.78
TMEM260-210ENST00000556422 F2Z2F3 143 aa3.95□□□□□ -1.78
TMEM260-210ENST00000556422 C19orf84I3L1E1 186 aa3.95□□□□□ -1.78
TMEM260-210ENST00000556422 HOXD3P31249 432 aaPredicted RBP3.95□□□□□ -1.78
TMEM260-210ENST00000556422 SUB1P53999 127 aaKnown RBP eCLIP3.95□□□□□ -1.78
TMEM260-210ENST00000556422 RRN3P1Q2M238 152 aa3.95□□□□□ -1.78
TMEM260-210ENST00000556422 CIARTQ8N365 385 aaPredicted RBP3.95□□□□□ -1.78
TMEM260-210ENST00000556422 ITLN2Q8WWU7 325 aaPredicted RBP3.95□□□□□ -1.78
TMEM260-210ENST00000556422 SLC25A2Q9BXI2 301 aa3.95□□□□□ -1.78
TMEM260-210ENST00000556422 ZNF469Q96JG9 3925 aaPredicted RBP3.95□□□□□ -1.78
TMEM260-210ENST00000556422 ODF3BA8MYP8 253 aa3.95□□□□□ -1.78
TMEM260-210ENST00000556422 PAX4O43316 350 aa3.95□□□□□ -1.78
TMEM260-210ENST00000556422 COX8AP10176 69 aa3.95□□□□□ -1.78
TMEM260-210ENST00000556422 SAA4P35542 130 aa3.95□□□□□ -1.78
TMEM260-210ENST00000556422 PSMB2P49721 201 aa3.95□□□□□ -1.78
TMEM260-210ENST00000556422 NPC2P61916 151 aa3.95□□□□□ -1.78
TMEM260-210ENST00000556422 FHL3Q13643 280 aa3.95□□□□□ -1.78
TMEM260-210ENST00000556422 S100A7L2Q5SY68 101 aa3.95□□□□□ -1.78
TMEM260-210ENST00000556422 GTSF1Q8WW33 167 aa3.95□□□□□ -1.78
TMEM260-210ENST00000556422 TCRBV4S1A1TA0A5B7 111 aa3.95□□□□□ -1.78
TMEM260-210ENST00000556422 TIMM23O14925 209 aa3.95□□□□□ -1.78
TMEM260-210ENST00000556422 UBE2L3P68036 154 aaKnown RBP3.95□□□□□ -1.78
TMEM260-210ENST00000556422 CENPWQ5EE01 88 aa3.95□□□□□ -1.78
TMEM260-210ENST00000556422 ZNF493Q6ZR52 646 aa3.95□□□□□ -1.78
TMEM260-210ENST00000556422 CENPEQ02224 2701 aa3.95□□□□□ -1.78
TMEM260-210ENST00000556422 ZANQ9Y493 2812 aa3.95□□□□□ -1.78
TMEM260-210ENST00000556422 SPG11Q96JI7 2443 aa3.95□□□□□ -1.78
TMEM260-210ENST00000556422 PLA2G2AP14555 144 aa3.95□□□□□ -1.78
TMEM260-210ENST00000556422 ZFP36P26651 326 aaKnown RBP3.95□□□□□ -1.78
TMEM260-210ENST00000556422 PQLC2Q6ZP29 291 aa3.95□□□□□ -1.78
TMEM260-210ENST00000556422 LINC00305Q7Z4B0 112 aa3.95□□□□□ -1.78
TMEM260-210ENST00000556422 BCL6BQ8N143 479 aaPredicted RBP3.95□□□□□ -1.78
TMEM260-210ENST00000556422 C11orf68Q9H3H3 251 aaKnown RBP3.95□□□□□ -1.78
TMEM260-210ENST00000556422 SCRT2Q9NQ03 307 aa3.95□□□□□ -1.78
TMEM260-210ENST00000556422 TRGV11A0A075B6L2 103 aa3.94□□□□□ -1.78
TMEM260-210ENST00000556422 RBMY1CP0DJD4 496 aa3.94□□□□□ -1.78
TMEM260-210ENST00000556422 RPL27AP46776 148 aaKnown RBP3.94□□□□□ -1.78
TMEM260-210ENST00000556422 ZNF56Q15929 161 aa3.94□□□□□ -1.78
TMEM260-210ENST00000556422 DYNAPQ8N1N2 210 aa3.94□□□□□ -1.78
TMEM260-210ENST00000556422 BBC3Q96PG8 261 aaPredicted RBP3.94□□□□□ -1.78
TMEM260-210ENST00000556422 KMT2BQ9UMN6 2715 aaPredicted RBP3.94□□□□□ -1.78
TMEM260-210ENST00000556422 C9JCJ5 164 aa3.94□□□□□ -1.78
TMEM260-210ENST00000556422 LEPROTL1O95214 131 aa3.94□□□□□ -1.78
TMEM260-210ENST00000556422 CD24P25063 80 aa3.94□□□□□ -1.78
TMEM260-210ENST00000556422 HILS1P60008 231 aa3.94□□□□□ -1.78
TMEM260-210ENST00000556422 TSKUQ8WUA8 353 aa3.94□□□□□ -1.78
TMEM260-210ENST00000556422 COPS9Q8WXC6 57 aa3.94□□□□□ -1.78
TMEM260-210ENST00000556422 SRSF12Q8WXF0 261 aaKnown RBP3.94□□□□□ -1.78
TMEM260-210ENST00000556422 AGPAT4-IT1Q9H0P7 198 aa3.94□□□□□ -1.78
TMEM260-210ENST00000556422 ZNF355PQ9NSJ1 428 aa3.94□□□□□ -1.78
TMEM260-210ENST00000556422 TP53TG3Q9ULZ0 132 aa3.94□□□□□ -1.78
TMEM260-210ENST00000556422 EPDR1Q9UM22 224 aa3.94□□□□□ -1.78
TMEM260-210ENST00000556422 AMMECR1Q9Y4X0 333 aaPredicted RBP3.94□□□□□ -1.78
TMEM260-210ENST00000556422 K7EMT4 169 aa3.94□□□□□ -1.78
TMEM260-210ENST00000556422 K7ERJ3 54 aa3.94□□□□□ -1.78
TMEM260-210ENST00000556422 M0R1W7 72 aa3.94□□□□□ -1.78
TMEM260-210ENST00000556422 SPINK4O60575 86 aa3.94□□□□□ -1.78
TMEM260-210ENST00000556422 IGLV2-8P01709 118 aa3.94□□□□□ -1.78
TMEM260-210ENST00000556422 COX7CP15954 63 aa3.94□□□□□ -1.78
TMEM260-210ENST00000556422 GNLYP22749 145 aa3.94□□□□□ -1.78
TMEM260-210ENST00000556422 PRR26Q8N8Z3 221 aa3.94□□□□□ -1.78
TMEM260-210ENST00000556422 MBD6Q96DN6 1003 aa3.94□□□□□ -1.78
TMEM260-210ENST00000556422 FMC1Q96HJ9 113 aa3.94□□□□□ -1.78
TMEM260-210ENST00000556422 FAM19A4Q96LR4 140 aa3.94□□□□□ -1.78
TMEM260-210ENST00000556422 TMEM167BQ9NRX6 74 aa3.94□□□□□ -1.78
TMEM260-210ENST00000556422 LINC00527Q9UJ94 153 aa3.94□□□□□ -1.78
TMEM260-210ENST00000556422 UBR5O95071 2799 aaPredicted RBP3.94□□□□□ -1.78
TMEM260-210ENST00000556422 IGHV3-21A0A0B4J1V1 117 aa3.93□□□□□ -1.78
TMEM260-210ENST00000556422 NDUFA3O95167 84 aa3.93□□□□□ -1.78
TMEM260-210ENST00000556422 IGKCP01834 107 aa3.93□□□□□ -1.78
TMEM260-210ENST00000556422 IL4P05112 153 aa3.93□□□□□ -1.78
TMEM260-210ENST00000556422 OR5AL1P0C617 328 aa3.93□□□□□ -1.78
TMEM260-210ENST00000556422 RPL11P62913 178 aaKnown RBP3.93□□□□□ -1.78
TMEM260-210ENST00000556422 C12orf74Q32Q52 190 aa3.93□□□□□ -1.78
TMEM260-210ENST00000556422 ZNF843Q8N446 348 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms