RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 LY6G6CO95867 125 aa6.75□□□□□ -1.33
SRP54-210ENST00000556380 BCL2P10415 239 aa6.75□□□□□ -1.33
SRP54-210ENST00000556380 UBE2G1P62253 170 aa6.75□□□□□ -1.33
SRP54-210ENST00000556380 ZNF674Q2M3X9 581 aa6.75□□□□□ -1.33
SRP54-210ENST00000556380 POM121L12Q8N7R1 296 aa6.75□□□□□ -1.33
SRP54-210ENST00000556380 SDF2L1Q9HCN8 221 aa6.75□□□□□ -1.33
SRP54-210ENST00000556380 MRPL16Q9NX20 251 aaKnown RBP6.75□□□□□ -1.33
SRP54-210ENST00000556380 KRBOX1C9JBD0 128 aa6.74□□□□□ -1.33
SRP54-210ENST00000556380 SH2D1AO60880 128 aa6.74□□□□□ -1.33
SRP54-210ENST00000556380 RNASE3P12724 160 aaKnown RBP6.74□□□□□ -1.33
SRP54-210ENST00000556380 RPL35P42766 123 aaKnown RBP6.74□□□□□ -1.33
SRP54-210ENST00000556380 MEF2BQ02080 365 aaPredicted RBP6.74□□□□□ -1.33
SRP54-210ENST00000556380 BAGE2Q86Y30 109 aa6.74□□□□□ -1.33
SRP54-210ENST00000556380 PTH2Q96A98 100 aa6.74□□□□□ -1.33
SRP54-210ENST00000556380 VSIG2Q96IQ7 327 aa6.74□□□□□ -1.33
SRP54-210ENST00000556380 C9orf85Q96MD7 179 aa6.74□□□□□ -1.33
SRP54-210ENST00000556380 KRTAP4-11Q9BYQ6 195 aa6.74□□□□□ -1.33
SRP54-210ENST00000556380 TRGV2A0A075B6R0 118 aa6.73□□□□□ -1.33
SRP54-210ENST00000556380 M0R2P5 195 aa6.73□□□□□ -1.33
SRP54-210ENST00000556380 FHL2Q14192 279 aa6.73□□□□□ -1.33
SRP54-210ENST00000556380 DNLZQ5SXM8 178 aa6.73□□□□□ -1.33
SRP54-210ENST00000556380 FAM162BQ5T6X4 162 aa6.73□□□□□ -1.33
SRP54-210ENST00000556380 C15orf53Q8NAA6 179 aa6.73□□□□□ -1.33
SRP54-210ENST00000556380 NHLRC2Q8NBF2 726 aa6.73□□□□□ -1.33
SRP54-210ENST00000556380 SMIM12Q96EX1 92 aa6.73□□□□□ -1.33
SRP54-210ENST00000556380 DERL1Q9BUN8 251 aa6.73□□□□□ -1.33
SRP54-210ENST00000556380 VAX2Q9UIW0 290 aa6.73□□□□□ -1.33
SRP54-210ENST00000556380 TRAV26-1A0A087WT03 109 aa6.72□□□□□ -1.33
SRP54-210ENST00000556380 H3BNG1 76 aa6.72□□□□□ -1.33
SRP54-210ENST00000556380 IGLV2-8P01709 118 aa6.72□□□□□ -1.33
SRP54-210ENST00000556380 ORM1P02763 201 aa6.72□□□□□ -1.33
SRP54-210ENST00000556380 OR5I1Q13606 314 aa6.72□□□□□ -1.33
SRP54-210ENST00000556380 ZNF479Q96JC4 524 aa6.72□□□□□ -1.33
SRP54-210ENST00000556380 FRAS1Q86XX4 4008 aa6.72□□□□□ -1.33
SRP54-210ENST00000556380 TRBV20OR9-2A0A075B6H5 130 aa6.71□□□□□ -1.34
SRP54-210ENST00000556380 RAB19A4D1S5 217 aa6.71□□□□□ -1.34
SRP54-210ENST00000556380 RBFOX3A6NFN3 312 aa6.71□□□□□ -1.34
SRP54-210ENST00000556380 B4DEV8 164 aa6.71□□□□□ -1.34
SRP54-210ENST00000556380 IGHV3-53P01767 116 aa6.71□□□□□ -1.34
SRP54-210ENST00000556380 P0DMU3 169 aa6.71□□□□□ -1.34
SRP54-210ENST00000556380 FAM231AP0DMU4 169 aa6.71□□□□□ -1.34
SRP54-210ENST00000556380 FAM231CP0DMU5 169 aa6.71□□□□□ -1.34
SRP54-210ENST00000556380 ZNF506Q5JVG8 444 aa6.71□□□□□ -1.34
SRP54-210ENST00000556380 TEX261Q6UWH6 196 aa6.71□□□□□ -1.34
SRP54-210ENST00000556380 SCRT2Q9NQ03 307 aa6.71□□□□□ -1.34
SRP54-210ENST00000556380 MED9Q9NWA0 146 aa6.71□□□□□ -1.34
SRP54-210ENST00000556380 FAT2Q9NYQ8 4349 aa6.71□□□□□ -1.34
SRP54-210ENST00000556380 TRAV4A0A0B4J268 109 aa6.7□□□□□ -1.34
SRP54-210ENST00000556380 A0A0J9YY99 117 aa6.7□□□□□ -1.34
SRP54-210ENST00000556380 PGPEP1LA6NFU8 196 aa6.7□□□□□ -1.34
SRP54-210ENST00000556380 TMEM250H0YL14 139 aa6.7□□□□□ -1.34
SRP54-210ENST00000556380 M0R036 132 aa6.7□□□□□ -1.34
SRP54-210ENST00000556380 RS1O15537 224 aa6.7□□□□□ -1.34
SRP54-210ENST00000556380 SFTA3P0C7M3 94 aa6.7□□□□□ -1.34
SRP54-210ENST00000556380 CRYBA4P53673 196 aa6.7□□□□□ -1.34
SRP54-210ENST00000556380 RNF212Q495C1 297 aa6.7□□□□□ -1.34
SRP54-210ENST00000556380 ZNF876PQ49A33 203 aa6.7□□□□□ -1.34
SRP54-210ENST00000556380 CENPWQ5EE01 88 aa6.7□□□□□ -1.34
SRP54-210ENST00000556380 PIK3CD-AS1Q5SR53 167 aa6.7□□□□□ -1.34
SRP54-210ENST00000556380 IL36BQ9NZH7 164 aa6.7□□□□□ -1.34
SRP54-210ENST00000556380 A0A096LPF7 62 aa6.69□□□□□ -1.34
SRP54-210ENST00000556380 GRIFINA4D1Z8 144 aa6.69□□□□□ -1.34
SRP54-210ENST00000556380 CIDEAO60543 219 aa6.69□□□□□ -1.34
SRP54-210ENST00000556380 NUDT3O95989 172 aa6.69□□□□□ -1.34
SRP54-210ENST00000556380 CXCL1P09341 107 aa6.69□□□□□ -1.34
SRP54-210ENST00000556380 ARMS2P0C7Q2 107 aa6.69□□□□□ -1.34
SRP54-210ENST00000556380 ASIPP42127 132 aa6.69□□□□□ -1.34
SRP54-210ENST00000556380 SLAQ13239 276 aa6.69□□□□□ -1.34
SRP54-210ENST00000556380 CFAP126Q5VTH2 177 aa6.69□□□□□ -1.34
SRP54-210ENST00000556380 SMDT1Q9H4I9 107 aa6.69□□□□□ -1.34
SRP54-210ENST00000556380 BIN3Q9NQY0 253 aa6.69□□□□□ -1.34
SRP54-210ENST00000556380 PRO0255Q9UI72 69 aa6.69□□□□□ -1.34
SRP54-210ENST00000556380 HHLA3Q9XRX5 114 aa6.69□□□□□ -1.34
SRP54-210ENST00000556380 TMSB15BA0A087X1C1 80 aa6.68□□□□□ -1.34
SRP54-210ENST00000556380 C19orf71A6NCJ1 209 aa6.68□□□□□ -1.34
SRP54-210ENST00000556380 C9JCJ5 164 aa6.68□□□□□ -1.34
SRP54-210ENST00000556380 H3BVH4 76 aa6.68□□□□□ -1.34
SRP54-210ENST00000556380 S100A4P26447 101 aaKnown RBP6.68□□□□□ -1.34
SRP54-210ENST00000556380 RPL19P84098 196 aaKnown RBP6.68□□□□□ -1.34
SRP54-210ENST00000556380 SRSF3P84103 164 aaKnown RBP6.68□□□□□ -1.34
SRP54-210ENST00000556380 LCE5AQ5TCM9 118 aa6.68□□□□□ -1.34
SRP54-210ENST00000556380 UFSP1Q6NVU6 142 aa6.68□□□□□ -1.34
SRP54-210ENST00000556380 OR4C5Q8NGB2 326 aa6.68□□□□□ -1.34
SRP54-210ENST00000556380 FAM210AQ96ND0 272 aa6.68□□□□□ -1.34
SRP54-210ENST00000556380 LINC00588Q9Y4M8 146 aa6.68□□□□□ -1.34
SRP54-210ENST00000556380 EPPK1P58107 5090 aaKnown RBP6.68□□□□□ -1.34
SRP54-210ENST00000556380 NACAE9PAV3 2078 aa6.67□□□□□ -1.34
SRP54-210ENST00000556380 TRGV4A0A0C4DH28 118 aa6.67□□□□□ -1.34
SRP54-210ENST00000556380 GATA1P15976 413 aaPredicted RBP6.67□□□□□ -1.34
SRP54-210ENST00000556380 GNG4P50150 75 aa6.67□□□□□ -1.34
SRP54-210ENST00000556380 FAM3BP58499 235 aaPredicted RBP6.67□□□□□ -1.34
SRP54-210ENST00000556380 ESRGQ1W209 222 aa6.67□□□□□ -1.34
SRP54-210ENST00000556380 PRR27Q6MZM9 219 aa6.67□□□□□ -1.34
SRP54-210ENST00000556380 OCC1Q8TAD7 63 aa6.67□□□□□ -1.34
SRP54-210ENST00000556380 PCNPQ8WW12 178 aaKnown RBP6.67□□□□□ -1.34
SRP54-210ENST00000556380 JPT2Q9H910 190 aa6.67□□□□□ -1.34
SRP54-210ENST00000556380 HECTD4Q9Y4D8 3996 aa6.66□□□□□ -1.34
SRP54-210ENST00000556380 K7EN84 100 aa6.66□□□□□ -1.34
SRP54-210ENST00000556380 SNAI2O43623 268 aa6.66□□□□□ -1.34
SRP54-210ENST00000556380 NXPH4O95158 308 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms