RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 ZC2HC1AQ96GY0 325 aa7.99□□□□□ -1.13
SLIRP-205ENST00000556310 ZNF479Q96JC4 524 aa7.99□□□□□ -1.13
SLIRP-205ENST00000556310 C9orf85Q96MD7 179 aa7.99□□□□□ -1.13
SLIRP-205ENST00000556310 MANBALQ9NQG1 85 aa7.99□□□□□ -1.13
SLIRP-205ENST00000556310 HHLA3Q9XRX5 114 aa7.99□□□□□ -1.13
SLIRP-205ENST00000556310 ICOSQ9Y6W8 199 aa7.99□□□□□ -1.13
SLIRP-205ENST00000556310 TRAV1-1A0A0B4J248 108 aa7.98□□□□□ -1.13
SLIRP-205ENST00000556310 RNASE3P12724 160 aaKnown RBP7.98□□□□□ -1.13
SLIRP-205ENST00000556310 SULT1A2P50226 295 aa7.98□□□□□ -1.13
SLIRP-205ENST00000556310 ESRGQ1W209 222 aa7.98□□□□□ -1.13
SLIRP-205ENST00000556310 OR4C5Q8NGB2 326 aa7.98□□□□□ -1.13
SLIRP-205ENST00000556310 UPK3BQ9BT76 320 aa7.98□□□□□ -1.13
SLIRP-205ENST00000556310 MRPS16Q9Y3D3 137 aaKnown RBP7.98□□□□□ -1.13
SLIRP-205ENST00000556310 IGKV3D-20A0A0C4DH25 116 aa7.97□□□□□ -1.13
SLIRP-205ENST00000556310 NBDYA0A0U1RRE5 68 aa7.97□□□□□ -1.13
SLIRP-205ENST00000556310 TEX46H3BTG2 121 aa7.97□□□□□ -1.13
SLIRP-205ENST00000556310 RTL8CO15255 209 aa7.97□□□□□ -1.13
SLIRP-205ENST00000556310 SH2D1AO60880 128 aa7.97□□□□□ -1.13
SLIRP-205ENST00000556310 S100A9P06702 114 aaKnown RBP7.97□□□□□ -1.13
SLIRP-205ENST00000556310 ASIPP42127 132 aa7.97□□□□□ -1.13
SLIRP-205ENST00000556310 ZNF876PQ49A33 203 aa7.97□□□□□ -1.13
SLIRP-205ENST00000556310 FAM162BQ5T6X4 162 aa7.97□□□□□ -1.13
SLIRP-205ENST00000556310 C9orf62Q8N4C0 152 aa7.97□□□□□ -1.13
SLIRP-205ENST00000556310 PTH2Q96A98 100 aa7.97□□□□□ -1.13
SLIRP-205ENST00000556310 CDIP1Q9H305 208 aa7.97□□□□□ -1.13
SLIRP-205ENST00000556310 B4DEV8 164 aa7.96□□□□□ -1.14
SLIRP-205ENST00000556310 C9JCJ5 164 aa7.96□□□□□ -1.14
SLIRP-205ENST00000556310 ORM1P02763 201 aa7.96□□□□□ -1.14
SLIRP-205ENST00000556310 S100A4P26447 101 aaKnown RBP7.96□□□□□ -1.14
SLIRP-205ENST00000556310 CRIP1P50238 77 aa7.96□□□□□ -1.14
SLIRP-205ENST00000556310 MRPL23Q16540 153 aaKnown RBP7.96□□□□□ -1.14
SLIRP-205ENST00000556310 ZNF674Q2M3X9 581 aa7.96□□□□□ -1.14
SLIRP-205ENST00000556310 SOHLH1Q5JUK2 328 aa7.96□□□□□ -1.14
SLIRP-205ENST00000556310 ZNF506Q5JVG8 444 aa7.96□□□□□ -1.14
SLIRP-205ENST00000556310 XP32Q5T750 250 aa7.96□□□□□ -1.14
SLIRP-205ENST00000556310 PCNPQ8WW12 178 aaKnown RBP7.96□□□□□ -1.14
SLIRP-205ENST00000556310 GNG13Q9P2W3 67 aa7.96□□□□□ -1.14
SLIRP-205ENST00000556310 KRBOX1C9JBD0 128 aa7.95□□□□□ -1.14
SLIRP-205ENST00000556310 M0R036 132 aa7.95□□□□□ -1.14
SLIRP-205ENST00000556310 RS1O15537 224 aa7.95□□□□□ -1.14
SLIRP-205ENST00000556310 CIDEAO60543 219 aa7.95□□□□□ -1.14
SLIRP-205ENST00000556310 GATA1P15976 413 aaPredicted RBP7.95□□□□□ -1.14
SLIRP-205ENST00000556310 CCL20P78556 96 aa7.95□□□□□ -1.14
SLIRP-205ENST00000556310 TTC32Q5I0X7 151 aa7.95□□□□□ -1.14
SLIRP-205ENST00000556310 PIK3CD-AS1Q5SR53 167 aa7.95□□□□□ -1.14
SLIRP-205ENST00000556310 DNLZQ5SXM8 178 aa7.95□□□□□ -1.14
SLIRP-205ENST00000556310 C1orf134Q5TEV5 83 aa7.95□□□□□ -1.14
SLIRP-205ENST00000556310 CFAP126Q5VTH2 177 aa7.95□□□□□ -1.14
SLIRP-205ENST00000556310 C11orf52Q96A22 123 aa7.95□□□□□ -1.14
SLIRP-205ENST00000556310 TXNDC17Q9BRA2 123 aa7.95□□□□□ -1.14
SLIRP-205ENST00000556310 Q9H8V8 135 aa7.95□□□□□ -1.14
SLIRP-205ENST00000556310 IL36BQ9NZH7 164 aa7.95□□□□□ -1.14
SLIRP-205ENST00000556310 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.95□□□□□ -1.14
SLIRP-205ENST00000556310 PKD1P98161 4303 aa7.94□□□□□ -1.14
SLIRP-205ENST00000556310 PKHD1P08F94 4074 aa7.94□□□□□ -1.14
SLIRP-205ENST00000556310 PGPEP1LA6NFU8 196 aa7.94□□□□□ -1.14
SLIRP-205ENST00000556310 H3BVH4 76 aa7.94□□□□□ -1.14
SLIRP-205ENST00000556310 K7EQD1 137 aa7.94□□□□□ -1.14
SLIRP-205ENST00000556310 IFNA1P01562 189 aa7.94□□□□□ -1.14
SLIRP-205ENST00000556310 GYPEP15421 78 aa7.94□□□□□ -1.14
SLIRP-205ENST00000556310 SRIP30626 198 aa7.94□□□□□ -1.14
SLIRP-205ENST00000556310 NEGR1Q7Z3B1 354 aa7.94□□□□□ -1.14
SLIRP-205ENST00000556310 NHLRC2Q8NBF2 726 aa7.94□□□□□ -1.14
SLIRP-205ENST00000556310 MLST8Q9BVC4 326 aa7.94□□□□□ -1.14
SLIRP-205ENST00000556310 PRSS29PA6NIE9 313 aa7.93□□□□□ -1.14
SLIRP-205ENST00000556310 MEF2BQ02080 365 aaPredicted RBP7.93□□□□□ -1.14
SLIRP-205ENST00000556310 BAGE2Q86Y30 109 aa7.93□□□□□ -1.14
SLIRP-205ENST00000556310 A0A1B0GVG6 124 aa7.92□□□□□ -1.14
SLIRP-205ENST00000556310 A0A1W2PPQ1 181 aa7.92□□□□□ -1.14
SLIRP-205ENST00000556310 A8MWV9 139 aa7.92□□□□□ -1.14
SLIRP-205ENST00000556310 NXPH4O95158 308 aa7.92□□□□□ -1.14
SLIRP-205ENST00000556310 ARMS2P0C7Q2 107 aa7.92□□□□□ -1.14
SLIRP-205ENST00000556310 BCL2P10415 239 aa7.92□□□□□ -1.14
SLIRP-205ENST00000556310 RPL35P42766 123 aaKnown RBP7.92□□□□□ -1.14
SLIRP-205ENST00000556310 RHOHQ15669 191 aa7.92□□□□□ -1.14
SLIRP-205ENST00000556310 LYPD5Q6UWN5 251 aa7.92□□□□□ -1.14
SLIRP-205ENST00000556310 SH2D6Q7Z4S9 175 aa7.92□□□□□ -1.14
SLIRP-205ENST00000556310 C6orf223Q8N319 242 aa7.92□□□□□ -1.14
SLIRP-205ENST00000556310 SYT8Q8NBV8 401 aa7.92□□□□□ -1.14
SLIRP-205ENST00000556310 DERL1Q9BUN8 251 aa7.92□□□□□ -1.14
SLIRP-205ENST00000556310 KRTAP1-5Q9BYS1 174 aa7.92□□□□□ -1.14
SLIRP-205ENST00000556310 PARLQ9H300 379 aa7.92□□□□□ -1.14
SLIRP-205ENST00000556310 TMSB15BA0A087X1C1 80 aa7.91□□□□□ -1.14
SLIRP-205ENST00000556310 LOC100131303A0A0U1RQF7 123 aa7.91□□□□□ -1.14
SLIRP-205ENST00000556310 A0A1B0GVY2 172 aa7.91□□□□□ -1.14
SLIRP-205ENST00000556310 TRBV6-4A0A1B0GX49 114 aa7.91□□□□□ -1.14
SLIRP-205ENST00000556310 GRIFINA4D1Z8 144 aa7.91□□□□□ -1.14
SLIRP-205ENST00000556310 SIVA1O15304 175 aa7.91□□□□□ -1.14
SLIRP-205ENST00000556310 PDE6DO43924 150 aa7.91□□□□□ -1.14
SLIRP-205ENST00000556310 CXCL1P09341 107 aa7.91□□□□□ -1.14
SLIRP-205ENST00000556310 MGST1P10620 155 aaKnown RBP7.91□□□□□ -1.14
SLIRP-205ENST00000556310 TAGLN2P37802 199 aaKnown RBP7.91□□□□□ -1.14
SLIRP-205ENST00000556310 SRSF3P84103 164 aaKnown RBP7.91□□□□□ -1.14
SLIRP-205ENST00000556310 ZFP2Q6ZN57 461 aa7.91□□□□□ -1.14
SLIRP-205ENST00000556310 ZNF575Q86XF7 245 aa7.91□□□□□ -1.14
SLIRP-205ENST00000556310 SLC25A29Q8N8R3 303 aa7.91□□□□□ -1.14
SLIRP-205ENST00000556310 PRADC1Q9BSG0 188 aa7.91□□□□□ -1.14
SLIRP-205ENST00000556310 SCRT2Q9NQ03 307 aa7.91□□□□□ -1.14
SLIRP-205ENST00000556310 DNAH11Q96DT5 4516 aa7.91□□□□□ -1.14
SLIRP-205ENST00000556310 IGHV3-73A0A0B4J1V6 119 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms