RNA–Protein interactions for RNA: ENST00000556264.1

SPTLC2-204, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-204ENST00000556264 TMEM106BQ9NUM4 274 aa2.26□□□□□ -2.05
SPTLC2-204ENST00000556264 IDI2-AS1Q9NZ38 188 aa2.26□□□□□ -2.05
SPTLC2-204ENST00000556264 NAT8BQ9UHF3 227 aa2.26□□□□□ -2.05
SPTLC2-204ENST00000556264 RPUSD1Q9UJJ7 312 aaKnown RBP2.26□□□□□ -2.05
SPTLC2-204ENST00000556264 LINC00588Q9Y4M8 146 aa2.26□□□□□ -2.05
SPTLC2-204ENST00000556264 U3KQK5 164 aa2.26□□□□□ -2.05
SPTLC2-204ENST00000556264 ARL2-SNX15V9GYD0 113 aa2.26□□□□□ -2.05
SPTLC2-204ENST00000556264 CHD7Q9P2D1 2997 aa2.25□□□□□ -2.05
SPTLC2-204ENST00000556264 CEP192Q8TEP8 1941 aa2.25□□□□□ -2.05
SPTLC2-204ENST00000556264 RP1P56715 2156 aa2.25□□□□□ -2.05
SPTLC2-204ENST00000556264 IGKV1D-17A0A075B6S4 117 aa2.25□□□□□ -2.05
SPTLC2-204ENST00000556264 TRAV3A0A0B4J244 114 aa2.25□□□□□ -2.05
SPTLC2-204ENST00000556264 TEX50A0A1B0GTY4 177 aa2.25□□□□□ -2.05
SPTLC2-204ENST00000556264 A0A1W2PRE2 83 aa2.25□□□□□ -2.05
SPTLC2-204ENST00000556264 SPINK4O60575 86 aa2.25□□□□□ -2.05
SPTLC2-204ENST00000556264 SH2D1AO60880 128 aa2.25□□□□□ -2.05
SPTLC2-204ENST00000556264 OR10J4P0C629 311 aa2.25□□□□□ -2.05
SPTLC2-204ENST00000556264 SAA2P0DJI9 122 aaPredicted RBP2.25□□□□□ -2.05
SPTLC2-204ENST00000556264 HIST1H1EP10412 219 aaKnown RBP2.25□□□□□ -2.05
SPTLC2-204ENST00000556264 DEFA4P12838 97 aa2.25□□□□□ -2.05
SPTLC2-204ENST00000556264 NPPCP23582 126 aa2.25□□□□□ -2.05
SPTLC2-204ENST00000556264 TCL1AP56279 114 aa2.25□□□□□ -2.05
SPTLC2-204ENST00000556264 UBE2L3P68036 154 aaKnown RBP2.25□□□□□ -2.05
SPTLC2-204ENST00000556264 PRCDQ00LT1 54 aa2.25□□□□□ -2.05
SPTLC2-204ENST00000556264 Q0VG73 95 aa2.25□□□□□ -2.05
SPTLC2-204ENST00000556264 PMCHL1Q16048 86 aa2.25□□□□□ -2.05
SPTLC2-204ENST00000556264 DEFB109BQ30KR1 87 aa2.25□□□□□ -2.05
SPTLC2-204ENST00000556264 VMA21Q3ZAQ7 101 aa2.25□□□□□ -2.05
SPTLC2-204ENST00000556264 SPATA45Q537H7 98 aa2.25□□□□□ -2.05
SPTLC2-204ENST00000556264 IBA57Q5T440 356 aaKnown RBP2.25□□□□□ -2.05
SPTLC2-204ENST00000556264 C10orf113Q5VZT2 155 aa2.25□□□□□ -2.05
SPTLC2-204ENST00000556264 IGFL3Q6UXB1 125 aa2.25□□□□□ -2.05
SPTLC2-204ENST00000556264 MIR17HGQ75NE6 70 aa2.25□□□□□ -2.05
SPTLC2-204ENST00000556264 NIT1Q86X76 327 aa2.25□□□□□ -2.05
SPTLC2-204ENST00000556264 DEFB108BQ8NET1 73 aa2.25□□□□□ -2.05
SPTLC2-204ENST00000556264 OR4B1Q8NGF8 309 aa2.25□□□□□ -2.05
SPTLC2-204ENST00000556264 OR1L8Q8NGR8 309 aa2.25□□□□□ -2.05
SPTLC2-204ENST00000556264 OR10X1Q8NGY0 326 aa2.25□□□□□ -2.05
SPTLC2-204ENST00000556264 VSTM2AQ8TAG5 236 aa2.25□□□□□ -2.05
SPTLC2-204ENST00000556264 H1FXQ92522 213 aaKnown RBP2.25□□□□□ -2.05
SPTLC2-204ENST00000556264 LEAP2Q969E1 77 aa2.25□□□□□ -2.05
SPTLC2-204ENST00000556264 CCL13Q99616 98 aa2.25□□□□□ -2.05
SPTLC2-204ENST00000556264 DERL1Q9BUN8 251 aa2.25□□□□□ -2.05
SPTLC2-204ENST00000556264 OSTCQ9NRP0 149 aa2.25□□□□□ -2.05
SPTLC2-204ENST00000556264 TMEM14BQ9NUH8 114 aa2.25□□□□□ -2.05
SPTLC2-204ENST00000556264 UQCR10Q9UDW1 63 aa2.25□□□□□ -2.05
SPTLC2-204ENST00000556264 GPR179Q6PRD1 2367 aa2.25□□□□□ -2.05
SPTLC2-204ENST00000556264 SEC16AO15027 2179 aa2.25□□□□□ -2.05
SPTLC2-204ENST00000556264 TRANK1O15050 2925 aa2.24□□□□□ -2.05
SPTLC2-204ENST00000556264 KNL1Q8NG31 2342 aa2.24□□□□□ -2.05
SPTLC2-204ENST00000556264 TNRC6BQ9UPQ9 1833 aaKnown RBP2.24□□□□□ -2.05
SPTLC2-204ENST00000556264 BRCA2P51587 3418 aa2.24□□□□□ -2.05
SPTLC2-204ENST00000556264 IGKV1D-37A0A075B6S9 117 aa2.24□□□□□ -2.05
SPTLC2-204ENST00000556264 DPRXA6NFQ7 191 aa2.24□□□□□ -2.05
SPTLC2-204ENST00000556264 M0R2Z0 102 aa2.24□□□□□ -2.05
SPTLC2-204ENST00000556264 LECT2O14960 151 aa2.24□□□□□ -2.05
SPTLC2-204ENST00000556264 NDUFB3O43676 98 aa2.24□□□□□ -2.05
SPTLC2-204ENST00000556264 SLC25A5P05141 298 aaKnown RBP2.24□□□□□ -2.05
SPTLC2-204ENST00000556264 GPX1P07203 203 aa2.24□□□□□ -2.05
SPTLC2-204ENST00000556264 ESDP10768 282 aa2.24□□□□□ -2.05
SPTLC2-204ENST00000556264 SRIP30626 198 aa2.24□□□□□ -2.05
SPTLC2-204ENST00000556264 GLRXP35754 106 aa2.24□□□□□ -2.05
SPTLC2-204ENST00000556264 LINC00313P59037 77 aa2.24□□□□□ -2.05
SPTLC2-204ENST00000556264 HERVK_113P63121 156 aa2.24□□□□□ -2.05
SPTLC2-204ENST00000556264 FXYD3Q14802 87 aa2.24□□□□□ -2.05
SPTLC2-204ENST00000556264 MRPL54Q6P161 138 aaKnown RBP2.24□□□□□ -2.05
SPTLC2-204ENST00000556264 RASL11AQ6T310 242 aa2.24□□□□□ -2.05
SPTLC2-204ENST00000556264 S100A7AQ86SG5 101 aa2.24□□□□□ -2.05
SPTLC2-204ENST00000556264 DEFB123Q8N688 67 aa2.24□□□□□ -2.05
SPTLC2-204ENST00000556264 ZNF439Q8NDP4 499 aa2.24□□□□□ -2.05
SPTLC2-204ENST00000556264 FDCSPQ8NFU4 85 aa2.24□□□□□ -2.05
SPTLC2-204ENST00000556264 SNHG12Q9BXW3 62 aa2.24□□□□□ -2.05
SPTLC2-204ENST00000556264 RNASE7Q9H1E1 156 aaKnown RBP2.24□□□□□ -2.05
SPTLC2-204ENST00000556264 BET1LQ9NYM9 111 aa2.24□□□□□ -2.05
SPTLC2-204ENST00000556264 WASHC3Q9Y3C0 194 aa2.24□□□□□ -2.05
SPTLC2-204ENST00000556264 MRPS16Q9Y3D3 137 aaKnown RBP2.24□□□□□ -2.05
SPTLC2-204ENST00000556264 AMMECR1Q9Y4X0 333 aaPredicted RBP2.24□□□□□ -2.05
SPTLC2-204ENST00000556264 V9GYV3 84 aa2.24□□□□□ -2.05
SPTLC2-204ENST00000556264 MYO9BQ13459 2157 aa2.24□□□□□ -2.05
SPTLC2-204ENST00000556264 ASXL3Q9C0F0 2248 aa2.23□□□□□ -2.05
SPTLC2-204ENST00000556264 TNRC6AQ8NDV7 1962 aaKnown RBP2.23□□□□□ -2.05
SPTLC2-204ENST00000556264 TRBV20OR9-2A0A075B6H5 130 aa2.23□□□□□ -2.05
SPTLC2-204ENST00000556264 TRAV8-1A0A0A6YYK1 113 aa2.23□□□□□ -2.05
SPTLC2-204ENST00000556264 SMIM27A0A1W2PRY6 76 aa2.23□□□□□ -2.05
SPTLC2-204ENST00000556264 TCRBV4S1A1TA0A5B7 111 aa2.23□□□□□ -2.05
SPTLC2-204ENST00000556264 CORTO00230 105 aa2.23□□□□□ -2.05
SPTLC2-204ENST00000556264 DLEU1O43261 78 aa2.23□□□□□ -2.05
SPTLC2-204ENST00000556264 NUPR1O60356 82 aa2.23□□□□□ -2.05
SPTLC2-204ENST00000556264 HYPMO75409 117 aa2.23□□□□□ -2.05
SPTLC2-204ENST00000556264 REG1AP05451 166 aa2.23□□□□□ -2.05
SPTLC2-204ENST00000556264 SAA1P0DJI8 122 aaPredicted RBP2.23□□□□□ -2.05
SPTLC2-204ENST00000556264 RNASE2P10153 161 aaKnown RBP2.23□□□□□ -2.05
SPTLC2-204ENST00000556264 CA7P43166 264 aa2.23□□□□□ -2.05
SPTLC2-204ENST00000556264 HBBP68871 147 aa2.23□□□□□ -2.05
SPTLC2-204ENST00000556264 PLGLAQ15195 96 aa2.23□□□□□ -2.05
SPTLC2-204ENST00000556264 C1orf195Q5TG92 126 aa2.23□□□□□ -2.05
SPTLC2-204ENST00000556264 KRTAP5-11Q6L8G4 156 aa2.23□□□□□ -2.05
SPTLC2-204ENST00000556264 SSX8Q7RTT4 187 aa2.23□□□□□ -2.05
SPTLC2-204ENST00000556264 FAM216BQ8N7L0 139 aa2.23□□□□□ -2.05
SPTLC2-204ENST00000556264 ST6GALNAC3Q8NDV1 305 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms