RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 SRIP30626 198 aa4.48□□□□□ -1.69
ATXN3-236ENST00000556220 ATP5IP56385 69 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-236ENST00000556220 RPL37AP61513 92 aaKnown RBP4.48□□□□□ -1.69
ATXN3-236ENST00000556220 LINC01620Q4KN68 170 aa4.48□□□□□ -1.69
ATXN3-236ENST00000556220 FFAR4Q5NUL3 377 aa4.48□□□□□ -1.69
ATXN3-236ENST00000556220 EIF4E3Q8N5X7 224 aaKnown RBP4.48□□□□□ -1.69
ATXN3-236ENST00000556220 C11orf72Q8NBR9 251 aa4.48□□□□□ -1.69
ATXN3-236ENST00000556220 BPIFCQ8NFQ6 507 aa4.48□□□□□ -1.69
ATXN3-236ENST00000556220 OR10P1Q8NGE3 313 aa4.48□□□□□ -1.69
ATXN3-236ENST00000556220 FAM213BQ8TBF2 198 aa4.48□□□□□ -1.69
ATXN3-236ENST00000556220 RPUSD4Q96CM3 377 aaKnown RBP4.48□□□□□ -1.69
ATXN3-236ENST00000556220 CIB3Q96Q77 187 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-236ENST00000556220 SLC25A2Q9BXI2 301 aa4.48□□□□□ -1.69
ATXN3-236ENST00000556220 MRPL32Q9BYC8 188 aaKnown RBP4.48□□□□□ -1.69
ATXN3-236ENST00000556220 Q9HAA7 133 aa4.48□□□□□ -1.69
ATXN3-236ENST00000556220 TIMM9Q9Y5J7 89 aa4.48□□□□□ -1.69
ATXN3-236ENST00000556220 PXMP4Q9Y6I8 212 aa4.48□□□□□ -1.69
ATXN3-236ENST00000556220 TRAV1-1A0A0B4J248 108 aa4.47□□□□□ -1.69
ATXN3-236ENST00000556220 TRAV12-3A0A0B4J271 114 aa4.47□□□□□ -1.69
ATXN3-236ENST00000556220 IFNA7P01567 189 aa4.47□□□□□ -1.69
ATXN3-236ENST00000556220 IGLV2-11P01706 119 aa4.47□□□□□ -1.69
ATXN3-236ENST00000556220 SRP19P09132 144 aaKnown RBP4.47□□□□□ -1.69
ATXN3-236ENST00000556220 OR5G3P0C626 314 aa4.47□□□□□ -1.69
ATXN3-236ENST00000556220 RPL7P18124 248 aaKnown RBP4.47□□□□□ -1.69
ATXN3-236ENST00000556220 PVALBP20472 110 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-236ENST00000556220 CAMLGP49069 296 aa4.47□□□□□ -1.69
ATXN3-236ENST00000556220 LINC01556Q5JQF7 62 aa4.47□□□□□ -1.69
ATXN3-236ENST00000556220 C10orf91Q5T1B1 145 aa4.47□□□□□ -1.69
ATXN3-236ENST00000556220 FAM122CQ6P4D5 195 aa4.47□□□□□ -1.69
ATXN3-236ENST00000556220 LCN15Q6UWW0 184 aa4.47□□□□□ -1.69
ATXN3-236ENST00000556220 Q6ZRU5 148 aa4.47□□□□□ -1.69
ATXN3-236ENST00000556220 CYP2G1PQ6ZSU1 146 aa4.47□□□□□ -1.69
ATXN3-236ENST00000556220 STX12Q86Y82 276 aa4.47□□□□□ -1.69
ATXN3-236ENST00000556220 SUN5Q8TC36 379 aa4.47□□□□□ -1.69
ATXN3-236ENST00000556220 LRRC20Q8TCA0 184 aa4.47□□□□□ -1.69
ATXN3-236ENST00000556220 TM2D2Q9BX73 214 aa4.47□□□□□ -1.69
ATXN3-236ENST00000556220 SLC39A9Q9NUM3 307 aa4.47□□□□□ -1.69
ATXN3-236ENST00000556220 TRBV20OR9-2A0A075B6H5 130 aa4.46□□□□□ -1.7
ATXN3-236ENST00000556220 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-236ENST00000556220 A0A087X0K7 114 aa4.46□□□□□ -1.7
ATXN3-236ENST00000556220 H3BQ15 152 aa4.46□□□□□ -1.7
ATXN3-236ENST00000556220 H3BRN7 92 aa4.46□□□□□ -1.7
ATXN3-236ENST00000556220 NDUFB4O95168 129 aa4.46□□□□□ -1.7
ATXN3-236ENST00000556220 PYYP10082 97 aa4.46□□□□□ -1.7
ATXN3-236ENST00000556220 RPL29P47914 159 aaKnown RBP4.46□□□□□ -1.7
ATXN3-236ENST00000556220 PLP1P60201 277 aa4.46□□□□□ -1.7
ATXN3-236ENST00000556220 ATP6V1FQ16864 119 aa4.46□□□□□ -1.7
ATXN3-236ENST00000556220 ANXA2RQ3ZCQ2 193 aa4.46□□□□□ -1.7
ATXN3-236ENST00000556220 IQCF2Q8IXL9 164 aa4.46□□□□□ -1.7
ATXN3-236ENST00000556220 SAT2Q96F10 170 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-236ENST00000556220 VGLL1Q99990 258 aa4.46□□□□□ -1.7
ATXN3-236ENST00000556220 SHANK2-AS3Q9BTD1 123 aa4.46□□□□□ -1.7
ATXN3-236ENST00000556220 GGACTQ9BVM4 153 aa4.46□□□□□ -1.7
ATXN3-236ENST00000556220 KLF12Q9Y4X4 402 aa4.46□□□□□ -1.7
ATXN3-236ENST00000556220 BORCS7-ASMTA0A0B4J1R7 106 aa4.45□□□□□ -1.7
ATXN3-236ENST00000556220 SMCO3A2RU48 225 aa4.45□□□□□ -1.7
ATXN3-236ENST00000556220 RBFOX3A6NFN3 312 aa4.45□□□□□ -1.7
ATXN3-236ENST00000556220 GAGE10A6NGK3 116 aa4.45□□□□□ -1.7
ATXN3-236ENST00000556220 GGTLC3B5MD39 225 aa4.45□□□□□ -1.7
ATXN3-236ENST00000556220 PRAC2D3DTV9 90 aa4.45□□□□□ -1.7
ATXN3-236ENST00000556220 H3BTX0 84 aa4.45□□□□□ -1.7
ATXN3-236ENST00000556220 SLC17A3O00476 420 aa4.45□□□□□ -1.7
ATXN3-236ENST00000556220 LECT2O14960 151 aa4.45□□□□□ -1.7
ATXN3-236ENST00000556220 ORM1P02763 201 aa4.45□□□□□ -1.7
ATXN3-236ENST00000556220 STAG3L2P0CL84 134 aa4.45□□□□□ -1.7
ATXN3-236ENST00000556220 STAG3L3P0CL85 134 aa4.45□□□□□ -1.7
ATXN3-236ENST00000556220 ARL14EPLP0DKL9 152 aa4.45□□□□□ -1.7
ATXN3-236ENST00000556220 CT45A10P0DMU9 189 aa4.45□□□□□ -1.7
ATXN3-236ENST00000556220 LEPP41159 167 aa4.45□□□□□ -1.7
ATXN3-236ENST00000556220 TCL1AP56279 114 aa4.45□□□□□ -1.7
ATXN3-236ENST00000556220 ZNF266Q14584 549 aa4.45□□□□□ -1.7
ATXN3-236ENST00000556220 ZNF506Q5JVG8 444 aa4.45□□□□□ -1.7
ATXN3-236ENST00000556220 C9orf47Q6ZRZ4 202 aa4.45□□□□□ -1.7
ATXN3-236ENST00000556220 OR10G4Q8NGN3 311 aa4.45□□□□□ -1.7
ATXN3-236ENST00000556220 OR10G9Q8NGN4 311 aa4.45□□□□□ -1.7
ATXN3-236ENST00000556220 OR10G7Q8NGN6 311 aa4.45□□□□□ -1.7
ATXN3-236ENST00000556220 BLNKQ8WV28 456 aa4.45□□□□□ -1.7
ATXN3-236ENST00000556220 FXYD5Q96DB9 178 aa4.45□□□□□ -1.7
ATXN3-236ENST00000556220 FAM210AQ96ND0 272 aa4.45□□□□□ -1.7
ATXN3-236ENST00000556220 ODF3Q96PU9 254 aa4.45□□□□□ -1.7
ATXN3-236ENST00000556220 TXNDC17Q9BRA2 123 aa4.45□□□□□ -1.7
ATXN3-236ENST00000556220 PAXXQ9BUH6 204 aa4.45□□□□□ -1.7
ATXN3-236ENST00000556220 DERL1Q9BUN8 251 aa4.45□□□□□ -1.7
ATXN3-236ENST00000556220 NPVFQ9HCQ7 196 aa4.45□□□□□ -1.7
ATXN3-236ENST00000556220 TRGV4A0A0C4DH28 118 aa4.44□□□□□ -1.7
ATXN3-236ENST00000556220 MAP1LC3B2A6NCE7 125 aa4.44□□□□□ -1.7
ATXN3-236ENST00000556220 SLC25A5P05141 298 aaKnown RBP4.44□□□□□ -1.7
ATXN3-236ENST00000556220 RAB11AP62491 216 aa4.44□□□□□ -1.7
ATXN3-236ENST00000556220 HBG1P69891 147 aa4.44□□□□□ -1.7
ATXN3-236ENST00000556220 HBG2P69892 147 aa4.44□□□□□ -1.7
ATXN3-236ENST00000556220 LAGE3Q14657 143 aa4.44□□□□□ -1.7
ATXN3-236ENST00000556220 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-236ENST00000556220 SFT2D1Q8WV19 159 aa4.44□□□□□ -1.7
ATXN3-236ENST00000556220 YPEL4Q96NS1 127 aa4.44□□□□□ -1.7
ATXN3-236ENST00000556220 MAP1LC3BQ9GZQ8 125 aa4.44□□□□□ -1.7
ATXN3-236ENST00000556220 ZNF331Q9NQX6 463 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-236ENST00000556220 MRPL16Q9NX20 251 aaKnown RBP4.44□□□□□ -1.7
ATXN3-236ENST00000556220 HIGD1AQ9Y241 93 aa4.44□□□□□ -1.7
ATXN3-236ENST00000556220 TRAV8-6A0A0B4J262 113 aa4.43□□□□□ -1.7
ATXN3-236ENST00000556220 CTXND1A0A1B0GTU2 59 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms