RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 MSRB1Q9NZV6 116 aa6.16□□□□□ -1.42
ATXN3-235ENST00000556082 ITPR2Q14571 2701 aa6.16□□□□□ -1.42
ATXN3-235ENST00000556082 C7orf71A4D174 169 aa6.15□□□□□ -1.42
ATXN3-235ENST00000556082 CRXO43186 299 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-235ENST00000556082 TCF21O43680 179 aa6.15□□□□□ -1.42
ATXN3-235ENST00000556082 CD28P10747 220 aa6.15□□□□□ -1.42
ATXN3-235ENST00000556082 CDKN1BP46527 198 aa6.15□□□□□ -1.42
ATXN3-235ENST00000556082 TFPI2P48307 235 aa6.15□□□□□ -1.42
ATXN3-235ENST00000556082 SPANXN1Q5VSR9 72 aa6.15□□□□□ -1.42
ATXN3-235ENST00000556082 AMTNQ6UX39 209 aa6.15□□□□□ -1.42
ATXN3-235ENST00000556082 TEX43Q6ZNM6 134 aa6.15□□□□□ -1.42
ATXN3-235ENST00000556082 Q8N976 141 aa6.15□□□□□ -1.42
ATXN3-235ENST00000556082 OR10AG1Q8NH19 301 aa6.15□□□□□ -1.42
ATXN3-235ENST00000556082 PRSS3P2Q8NHM4 247 aa6.15□□□□□ -1.42
ATXN3-235ENST00000556082 SPAG8Q99932 426 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-235ENST00000556082 TLN2Q9Y4G6 2542 aa6.15□□□□□ -1.43
ATXN3-235ENST00000556082 IGHV1-24A0A0C4DH33 117 aa6.14□□□□□ -1.43
ATXN3-235ENST00000556082 MUC21A0A0G2JKD1 596 aa6.14□□□□□ -1.43
ATXN3-235ENST00000556082 MUC21A0A140T8X8 626 aa6.14□□□□□ -1.43
ATXN3-235ENST00000556082 OR4C46A6NHA9 309 aa6.14□□□□□ -1.43
ATXN3-235ENST00000556082 TSTD3H0UI37 97 aa6.14□□□□□ -1.43
ATXN3-235ENST00000556082 C3orf79P0CE67 100 aa6.14□□□□□ -1.43
ATXN3-235ENST00000556082 RNASE3P12724 160 aaKnown RBP6.14□□□□□ -1.43
ATXN3-235ENST00000556082 HLA-DRB4P13762 266 aa6.14□□□□□ -1.43
ATXN3-235ENST00000556082 CMC4P56277 68 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-235ENST00000556082 PROK1P58294 105 aa6.14□□□□□ -1.43
ATXN3-235ENST00000556082 KHDC1LQ5JSQ8 128 aa6.14□□□□□ -1.43
ATXN3-235ENST00000556082 MUC21Q5SSG8 566 aa6.14□□□□□ -1.43
ATXN3-235ENST00000556082 FAM159AQ6UWV7 190 aa6.14□□□□□ -1.43
ATXN3-235ENST00000556082 FA2HQ7L5A8 372 aa6.14□□□□□ -1.43
ATXN3-235ENST00000556082 TMEM61Q8N0U2 210 aa6.14□□□□□ -1.43
ATXN3-235ENST00000556082 ZNF664Q8N3J9 261 aa6.14□□□□□ -1.43
ATXN3-235ENST00000556082 POM121L12Q8N7R1 296 aa6.14□□□□□ -1.43
ATXN3-235ENST00000556082 DYNLRB2Q8TF09 96 aa6.14□□□□□ -1.43
ATXN3-235ENST00000556082 MRAP2Q96G30 205 aa6.14□□□□□ -1.43
ATXN3-235ENST00000556082 CITED2Q99967 270 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-235ENST00000556082 HSPB8Q9UJY1 196 aa6.14□□□□□ -1.43
ATXN3-235ENST00000556082 HLA-DRB4X5D2U9 266 aa6.14□□□□□ -1.43
ATXN3-235ENST00000556082 MYO9AB2RTY4 2548 aa6.14□□□□□ -1.43
ATXN3-235ENST00000556082 H3BMM0 161 aa6.13□□□□□ -1.43
ATXN3-235ENST00000556082 H3BVH4 76 aa6.13□□□□□ -1.43
ATXN3-235ENST00000556082 GNRH2O43555 120 aa6.13□□□□□ -1.43
ATXN3-235ENST00000556082 LEPROTL1O95214 131 aa6.13□□□□□ -1.43
ATXN3-235ENST00000556082 BTF3P20290 206 aaKnown RBP6.13□□□□□ -1.43
ATXN3-235ENST00000556082 EVI2AP22794 236 aa6.13□□□□□ -1.43
ATXN3-235ENST00000556082 S100A4P26447 101 aaKnown RBP6.13□□□□□ -1.43
ATXN3-235ENST00000556082 KRTDAPP60985 99 aa6.13□□□□□ -1.43
ATXN3-235ENST00000556082 PMCHL1Q16048 86 aa6.13□□□□□ -1.43
ATXN3-235ENST00000556082 SPATA12Q7Z6I5 190 aa6.13□□□□□ -1.43
ATXN3-235ENST00000556082 Q8N1X5 172 aa6.13□□□□□ -1.43
ATXN3-235ENST00000556082 WWC2-AS2Q96NR7 200 aa6.13□□□□□ -1.43
ATXN3-235ENST00000556082 SMR3AQ99954 134 aa6.13□□□□□ -1.43
ATXN3-235ENST00000556082 C20orf144Q9BQM9 153 aa6.13□□□□□ -1.43
ATXN3-235ENST00000556082 NXT2Q9NPJ8 142 aaKnown RBP6.13□□□□□ -1.43
ATXN3-235ENST00000556082 ZNF256Q9Y2P7 627 aaPredicted RBP6.13□□□□□ -1.43
ATXN3-235ENST00000556082 PHLDA3Q9Y5J5 127 aa6.13□□□□□ -1.43
ATXN3-235ENST00000556082 SELENOKQ9Y6D0 94 aa6.13□□□□□ -1.43
ATXN3-235ENST00000556082 SONP18583 2426 aaKnown RBP6.13□□□□□ -1.43
ATXN3-235ENST00000556082 NBPF19A0A087WUL8 3843 aa6.12□□□□□ -1.43
ATXN3-235ENST00000556082 IGHV1OR15-1A0A075B7D0 117 aa6.12□□□□□ -1.43
ATXN3-235ENST00000556082 TRAV12-3A0A0B4J271 114 aa6.12□□□□□ -1.43
ATXN3-235ENST00000556082 IGHV3-16A0A0C4DH30 117 aa6.12□□□□□ -1.43
ATXN3-235ENST00000556082 KIR2DL5BA0A0G2JN68 375 aa6.12□□□□□ -1.43
ATXN3-235ENST00000556082 KIR2DL5BA0A0G2JPC4 375 aa6.12□□□□□ -1.43
ATXN3-235ENST00000556082 LINC00587B1AMM8 73 aa6.12□□□□□ -1.43
ATXN3-235ENST00000556082 J3KRW8 73 aa6.12□□□□□ -1.43
ATXN3-235ENST00000556082 M0R381 172 aa6.12□□□□□ -1.43
ATXN3-235ENST00000556082 TNFRSF6BO95407 300 aa6.12□□□□□ -1.43
ATXN3-235ENST00000556082 PPP1R17O96001 155 aa6.12□□□□□ -1.43
ATXN3-235ENST00000556082 NPYP01303 97 aa6.12□□□□□ -1.43
ATXN3-235ENST00000556082 IFI27P40305 119 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-235ENST00000556082 DEFB131AP59861 70 aa6.12□□□□□ -1.43
ATXN3-235ENST00000556082 SSTP61278 116 aa6.12□□□□□ -1.43
ATXN3-235ENST00000556082 CD300EQ496F6 205 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-235ENST00000556082 PET117Q6UWS5 81 aa6.12□□□□□ -1.43
ATXN3-235ENST00000556082 KIR2DL5AQ8N109 375 aa6.12□□□□□ -1.43
ATXN3-235ENST00000556082 NRACQ8N912 160 aa6.12□□□□□ -1.43
ATXN3-235ENST00000556082 OR2K2Q8NGT1 345 aa6.12□□□□□ -1.43
ATXN3-235ENST00000556082 C9orf85Q96MD7 179 aa6.12□□□□□ -1.43
ATXN3-235ENST00000556082 DUX3Q96PT4 197 aa6.12□□□□□ -1.43
ATXN3-235ENST00000556082 LINC00467Q9BRT7 94 aa6.12□□□□□ -1.43
ATXN3-235ENST00000556082 TMEM70Q9BUB7 260 aa6.12□□□□□ -1.43
ATXN3-235ENST00000556082 MAP1LC3AQ9H492 121 aa6.12□□□□□ -1.43
ATXN3-235ENST00000556082 GCN1Q92616 2671 aaKnown RBP6.12□□□□□ -1.43
ATXN3-235ENST00000556082 FASNP49327 2511 aaKnown RBP6.11□□□□□ -1.43
ATXN3-235ENST00000556082 ACANP16112 2415 aa6.11□□□□□ -1.43
ATXN3-235ENST00000556082 C20orf202A1L168 122 aa6.11□□□□□ -1.43
ATXN3-235ENST00000556082 SYS1-DBNDD2H3BUS1 97 aa6.11□□□□□ -1.43
ATXN3-235ENST00000556082 Q8N8P6 123 aa6.11□□□□□ -1.43
ATXN3-235ENST00000556082 PTH2Q96A98 100 aa6.11□□□□□ -1.43
ATXN3-235ENST00000556082 FAM110AQ9BQ89 295 aa6.11□□□□□ -1.43
ATXN3-235ENST00000556082 C20orf78Q9BR46 151 aa6.11□□□□□ -1.43
ATXN3-235ENST00000556082 MAP1LC3CQ9BXW4 147 aa6.11□□□□□ -1.43
ATXN3-235ENST00000556082 DPH3P1Q9H4G8 78 aa6.11□□□□□ -1.43
ATXN3-235ENST00000556082 MAP6D1Q9H9H5 199 aa6.11□□□□□ -1.43
ATXN3-235ENST00000556082 KIF25-AS1Q9Y6Z4 181 aa6.11□□□□□ -1.43
ATXN3-235ENST00000556082 ZFHX3Q15911 3703 aa6.1□□□□□ -1.43
ATXN3-235ENST00000556082 IGLV2-18A0A075B6J9 118 aa6.1□□□□□ -1.43
ATXN3-235ENST00000556082 TRGV11A0A075B6L2 103 aa6.1□□□□□ -1.43
ATXN3-235ENST00000556082 LOC389332A0A1B0GUA5 103 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms