RNA–Protein interactions for RNA: ENST00000556079.1

TMEM260-209, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 596 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-209ENST00000556079 CYB561D1Q8N8Q1 229 aa4.36□□□□□ -1.71
TMEM260-209ENST00000556079 FAM213BQ8TBF2 198 aa4.36□□□□□ -1.71
TMEM260-209ENST00000556079 ZC2HC1AQ96GY0 325 aa4.36□□□□□ -1.71
TMEM260-209ENST00000556079 Q9H8V8 135 aa4.36□□□□□ -1.71
TMEM260-209ENST00000556079 MRPS16Q9Y3D3 137 aaKnown RBP4.36□□□□□ -1.71
TMEM260-209ENST00000556079 ARL2-SNX15V9GYD0 113 aa4.36□□□□□ -1.71
TMEM260-209ENST00000556079 DNAH8Q96JB1 4490 aa4.36□□□□□ -1.71
TMEM260-209ENST00000556079 SRRM2Q9UQ35 2752 aaKnown RBP4.36□□□□□ -1.71
TMEM260-209ENST00000556079 DMBT1Q9UGM3 2413 aaPredicted RBP4.35□□□□□ -1.71
TMEM260-209ENST00000556079 TRGV11A0A075B6L2 103 aa4.35□□□□□ -1.71
TMEM260-209ENST00000556079 TMSB15BA0A087X1C1 80 aa4.35□□□□□ -1.71
TMEM260-209ENST00000556079 TRAV21A0A0B4J279 112 aa4.35□□□□□ -1.71
TMEM260-209ENST00000556079 IGKV3D-20A0A0C4DH25 116 aa4.35□□□□□ -1.71
TMEM260-209ENST00000556079 TRGV4A0A0C4DH28 118 aa4.35□□□□□ -1.71
TMEM260-209ENST00000556079 TRBV7-9A0A0J9YWB2 115 aa4.35□□□□□ -1.71
TMEM260-209ENST00000556079 K7EQD1 137 aa4.35□□□□□ -1.71
TMEM260-209ENST00000556079 M0R036 132 aa4.35□□□□□ -1.71
TMEM260-209ENST00000556079 IFNA7P01567 189 aa4.35□□□□□ -1.71
TMEM260-209ENST00000556079 RNASE3P12724 160 aaKnown RBP4.35□□□□□ -1.71
TMEM260-209ENST00000556079 GYPEP15421 78 aa4.35□□□□□ -1.71
TMEM260-209ENST00000556079 LINC00315P59091 139 aa4.35□□□□□ -1.71
TMEM260-209ENST00000556079 CCL20P78556 96 aa4.35□□□□□ -1.71
TMEM260-209ENST00000556079 SERF2P84101 59 aa4.35□□□□□ -1.71
TMEM260-209ENST00000556079 TDRG1Q3Y452 100 aa4.35□□□□□ -1.71
TMEM260-209ENST00000556079 ZNF506Q5JVG8 444 aa4.35□□□□□ -1.71
TMEM260-209ENST00000556079 FAM74A1Q5RGS3 127 aa4.35□□□□□ -1.71
TMEM260-209ENST00000556079 MAPKAPK5-AS1Q8N8E1 139 aa4.35□□□□□ -1.71
TMEM260-209ENST00000556079 TMED6Q8WW62 240 aa4.35□□□□□ -1.71
TMEM260-209ENST00000556079 ASB13Q8WXK3 278 aa4.35□□□□□ -1.71
TMEM260-209ENST00000556079 C18orf15Q96N68 181 aa4.35□□□□□ -1.71
TMEM260-209ENST00000556079 SAMD10Q9BYL1 202 aa4.35□□□□□ -1.71
TMEM260-209ENST00000556079 KRTAP4-9Q9BYQ8 210 aa4.35□□□□□ -1.71
TMEM260-209ENST00000556079 TMEM167BQ9NRX6 74 aa4.35□□□□□ -1.71
TMEM260-209ENST00000556079 HHLA3Q9XRX5 114 aa4.35□□□□□ -1.71
TMEM260-209ENST00000556079 ICOSQ9Y6W8 199 aa4.35□□□□□ -1.71
TMEM260-209ENST00000556079 MUC21A0A0G2JKD1 596 aa4.34□□□□□ -1.71
TMEM260-209ENST00000556079 MUC21A0A140T8X8 626 aa4.34□□□□□ -1.71
TMEM260-209ENST00000556079 C16orf90A8MZG2 172 aa4.34□□□□□ -1.71
TMEM260-209ENST00000556079 H3BVH4 76 aa4.34□□□□□ -1.71
TMEM260-209ENST00000556079 M0R2P5 195 aa4.34□□□□□ -1.71
TMEM260-209ENST00000556079 BCL2L11O43521 198 aa4.34□□□□□ -1.71
TMEM260-209ENST00000556079 PAGE4O60829 102 aa4.34□□□□□ -1.71
TMEM260-209ENST00000556079 SH2D1AO60880 128 aa4.34□□□□□ -1.71
TMEM260-209ENST00000556079 MBP02144 154 aa4.34□□□□□ -1.71
TMEM260-209ENST00000556079 DNAH10OSP0CZ25 163 aa4.34□□□□□ -1.71
TMEM260-209ENST00000556079 RPL19P84098 196 aaKnown RBP4.34□□□□□ -1.71
TMEM260-209ENST00000556079 CFAP126Q5VTH2 177 aa4.34□□□□□ -1.71
TMEM260-209ENST00000556079 CST9LP1Q5W188 147 aa4.34□□□□□ -1.71
TMEM260-209ENST00000556079 LYPD5Q6UWN5 251 aa4.34□□□□□ -1.71
TMEM260-209ENST00000556079 TMUB2Q71RG4 321 aa4.34□□□□□ -1.71
TMEM260-209ENST00000556079 OR4C5Q8NGB2 326 aa4.34□□□□□ -1.71
TMEM260-209ENST00000556079 RASL10AQ92737 203 aa4.34□□□□□ -1.71
TMEM260-209ENST00000556079 C9orf85Q96MD7 179 aa4.34□□□□□ -1.71
TMEM260-209ENST00000556079 ZNF471Q9BX82 626 aaPredicted RBP4.34□□□□□ -1.71
TMEM260-209ENST00000556079 SDF2L1Q9HCN8 221 aa4.34□□□□□ -1.71
TMEM260-209ENST00000556079 PRO0255Q9UI72 69 aa4.34□□□□□ -1.71
TMEM260-209ENST00000556079 LENEPQ9Y5L5 61 aa4.34□□□□□ -1.71
TMEM260-209ENST00000556079 UBR4Q5T4S7 5183 aa4.33□□□□□ -1.72
TMEM260-209ENST00000556079 TRAV4A0A0B4J268 109 aa4.33□□□□□ -1.72
TMEM260-209ENST00000556079 A0A1W2PRE2 83 aa4.33□□□□□ -1.72
TMEM260-209ENST00000556079 H3BNG1 76 aa4.33□□□□□ -1.72
TMEM260-209ENST00000556079 RS1O15537 224 aa4.33□□□□□ -1.72
TMEM260-209ENST00000556079 C1QBP02746 253 aa4.33□□□□□ -1.72
TMEM260-209ENST00000556079 PFN1P07737 140 aaKnown RBP4.33□□□□□ -1.72
TMEM260-209ENST00000556079 GATA1P15976 413 aaPredicted RBP4.33□□□□□ -1.72
TMEM260-209ENST00000556079 FAM3BP58499 235 aaPredicted RBP4.33□□□□□ -1.72
TMEM260-209ENST00000556079 ZNF876PQ49A33 203 aa4.33□□□□□ -1.72
TMEM260-209ENST00000556079 SMUG1Q53HV7 270 aa4.33□□□□□ -1.72
TMEM260-209ENST00000556079 Q6ZRN7 208 aaPredicted RBP4.33□□□□□ -1.72
TMEM260-209ENST00000556079 SPATA12Q7Z6I5 190 aa4.33□□□□□ -1.72
TMEM260-209ENST00000556079 C14orf178Q8N769 122 aaPredicted RBP4.33□□□□□ -1.72
TMEM260-209ENST00000556079 SLC25A29Q8N8R3 303 aa4.33□□□□□ -1.72
TMEM260-209ENST00000556079 SFT2D1Q8WV19 159 aa4.33□□□□□ -1.72
TMEM260-209ENST00000556079 SPXQ9BT56 116 aa4.33□□□□□ -1.72
TMEM260-209ENST00000556079 NDFIP1Q9BT67 221 aa4.33□□□□□ -1.72
TMEM260-209ENST00000556079 UPK3BQ9BT76 320 aa4.33□□□□□ -1.72
TMEM260-209ENST00000556079 DERL1Q9BUN8 251 aa4.33□□□□□ -1.72
TMEM260-209ENST00000556079 A0A1B0GVG6 124 aa4.32□□□□□ -1.72
TMEM260-209ENST00000556079 KRBOX1C9JBD0 128 aa4.32□□□□□ -1.72
TMEM260-209ENST00000556079 TAAR5O14804 337 aa4.32□□□□□ -1.72
TMEM260-209ENST00000556079 SIVA1O15304 175 aa4.32□□□□□ -1.72
TMEM260-209ENST00000556079 ORM1P02763 201 aa4.32□□□□□ -1.72
TMEM260-209ENST00000556079 SRIP30626 198 aa4.32□□□□□ -1.72
TMEM260-209ENST00000556079 ZNF345Q14585 488 aa4.32□□□□□ -1.72
TMEM260-209ENST00000556079 LGALSLQ3ZCW2 172 aaPredicted RBP4.32□□□□□ -1.72
TMEM260-209ENST00000556079 SOHLH1Q5JUK2 328 aa4.32□□□□□ -1.72
TMEM260-209ENST00000556079 DNAJC30Q96LL9 226 aa4.32□□□□□ -1.72
TMEM260-209ENST00000556079 HMCN2Q8NDA2 5059 aa4.31□□□□□ -1.72
TMEM260-209ENST00000556079 A0A087WWL8 130 aa4.31□□□□□ -1.72
TMEM260-209ENST00000556079 SERTM2A0A1B0GWG4 89 aa4.31□□□□□ -1.72
TMEM260-209ENST00000556079 KANTRA0A1W2PQU2 76 aa4.31□□□□□ -1.72
TMEM260-209ENST00000556079 GAGE12JA6NER3 117 aa4.31□□□□□ -1.72
TMEM260-209ENST00000556079 FBLL1A6NHQ2 334 aaKnown RBP4.31□□□□□ -1.72
TMEM260-209ENST00000556079 HMSDA8MTL9 139 aa4.31□□□□□ -1.72
TMEM260-209ENST00000556079 B4DEV8 164 aa4.31□□□□□ -1.72
TMEM260-209ENST00000556079 K7EQM0 130 aa4.31□□□□□ -1.72
TMEM260-209ENST00000556079 PFDN1O60925 122 aa4.31□□□□□ -1.72
TMEM260-209ENST00000556079 CDK2AP2O75956 126 aa4.31□□□□□ -1.72
TMEM260-209ENST00000556079 LTAP01374 205 aa4.31□□□□□ -1.72
TMEM260-209ENST00000556079 IGHV3-30P01768 117 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 156.9 ms