RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.41□□□□□ -0.9
CHMP4BP1-201ENST00000556017 IGKV3D-20A0A0C4DH25 116 aa9.41□□□□□ -0.9
CHMP4BP1-201ENST00000556017 INMT-MINDY4F8WBC2 141 aa9.41□□□□□ -0.9
CHMP4BP1-201ENST00000556017 GCGP01275 180 aa9.41□□□□□ -0.9
CHMP4BP1-201ENST00000556017 PLA2G1BP04054 148 aaKnown RBP9.41□□□□□ -0.9
CHMP4BP1-201ENST00000556017 MGST1P10620 155 aaKnown RBP9.41□□□□□ -0.9
CHMP4BP1-201ENST00000556017 ACOT6Q3I5F7 207 aaPredicted RBP9.41□□□□□ -0.9
CHMP4BP1-201ENST00000556017 FAM74A1Q5RGS3 127 aa9.41□□□□□ -0.9
CHMP4BP1-201ENST00000556017 SCGB1C1Q8TD33 95 aa9.41□□□□□ -0.9
CHMP4BP1-201ENST00000556017 MARVELD1Q9BSK0 173 aa9.41□□□□□ -0.9
CHMP4BP1-201ENST00000556017 TM2D2Q9BX73 214 aa9.41□□□□□ -0.9
CHMP4BP1-201ENST00000556017 PSG8Q9UQ74 426 aa9.41□□□□□ -0.9
CHMP4BP1-201ENST00000556017 GGTLC3B5MD39 225 aa9.4□□□□□ -0.9
CHMP4BP1-201ENST00000556017 UPK1BO75841 260 aa9.4□□□□□ -0.9
CHMP4BP1-201ENST00000556017 STAG3L2P0CL84 134 aa9.4□□□□□ -0.9
CHMP4BP1-201ENST00000556017 STAG3L3P0CL85 134 aa9.4□□□□□ -0.9
CHMP4BP1-201ENST00000556017 OR10G9Q8NGN4 311 aa9.4□□□□□ -0.9
CHMP4BP1-201ENST00000556017 OR10G7Q8NGN6 311 aa9.4□□□□□ -0.9
CHMP4BP1-201ENST00000556017 ENKURQ8TC29 256 aa9.4□□□□□ -0.9
CHMP4BP1-201ENST00000556017 DEFB104AQ8WTQ1 72 aa9.4□□□□□ -0.9
CHMP4BP1-201ENST00000556017 BAALCQ8WXS3 180 aa9.4□□□□□ -0.9
CHMP4BP1-201ENST00000556017 SAMD10Q9BYL1 202 aa9.4□□□□□ -0.9
CHMP4BP1-201ENST00000556017 NDUFA13Q9P0J0 144 aa9.4□□□□□ -0.9
CHMP4BP1-201ENST00000556017 UBR4Q5T4S7 5183 aa9.39□□□□□ -0.91
CHMP4BP1-201ENST00000556017 GAGE12JA6NER3 117 aa9.39□□□□□ -0.91
CHMP4BP1-201ENST00000556017 TAAR5O14804 337 aa9.39□□□□□ -0.91
CHMP4BP1-201ENST00000556017 GAGE1Q13065 139 aa9.39□□□□□ -0.91
CHMP4BP1-201ENST00000556017 GAGE4Q13068 117 aa9.39□□□□□ -0.91
CHMP4BP1-201ENST00000556017 GAGE5Q13069 117 aa9.39□□□□□ -0.91
CHMP4BP1-201ENST00000556017 GAGE13Q4V321 117 aa9.39□□□□□ -0.91
CHMP4BP1-201ENST00000556017 ZFP2Q6ZN57 461 aa9.39□□□□□ -0.91
CHMP4BP1-201ENST00000556017 C14orf178Q8N769 122 aaPredicted RBP9.39□□□□□ -0.91
CHMP4BP1-201ENST00000556017 C5orf17Q8NAS9 161 aa9.39□□□□□ -0.91
CHMP4BP1-201ENST00000556017 TRAV8-3A0A0A6YYJ7 113 aa9.38□□□□□ -0.91
CHMP4BP1-201ENST00000556017 SERTM2A0A1B0GWG4 89 aa9.38□□□□□ -0.91
CHMP4BP1-201ENST00000556017 A0A1W2PPV4 95 aa9.38□□□□□ -0.91
CHMP4BP1-201ENST00000556017 RNF222A6NCQ9 220 aa9.38□□□□□ -0.91
CHMP4BP1-201ENST00000556017 FLI1Q01543 452 aaPredicted RBP9.38□□□□□ -0.91
CHMP4BP1-201ENST00000556017 RAB24Q969Q5 203 aa9.38□□□□□ -0.91
CHMP4BP1-201ENST00000556017 GCHFRP30047 84 aa9.37□□□□□ -0.91
CHMP4BP1-201ENST00000556017 PIK3CD-AS1Q5SR53 167 aa9.37□□□□□ -0.91
CHMP4BP1-201ENST00000556017 NIT1Q86X76 327 aa9.37□□□□□ -0.91
CHMP4BP1-201ENST00000556017 OR2T35Q8NGX2 323 aa9.37□□□□□ -0.91
CHMP4BP1-201ENST00000556017 OR2G3Q8NGZ4 309 aa9.37□□□□□ -0.91
CHMP4BP1-201ENST00000556017 NDFIP1Q9BT67 221 aa9.37□□□□□ -0.91
CHMP4BP1-201ENST00000556017 CHAC1Q9BUX1 264 aa9.37□□□□□ -0.91
CHMP4BP1-201ENST00000556017 EPDR1Q9UM22 224 aa9.37□□□□□ -0.91
CHMP4BP1-201ENST00000556017 CDC34P49427 236 aaPredicted RBP9.36□□□□□ -0.91
CHMP4BP1-201ENST00000556017 SUMO1P63165 101 aaKnown RBP9.36□□□□□ -0.91
CHMP4BP1-201ENST00000556017 SMUG1Q53HV7 270 aa9.36□□□□□ -0.91
CHMP4BP1-201ENST00000556017 PRNTQ86SH4 94 aa9.36□□□□□ -0.91
CHMP4BP1-201ENST00000556017 CYB561D1Q8N8Q1 229 aa9.36□□□□□ -0.91
CHMP4BP1-201ENST00000556017 CIRBP-AS1Q8TBR5 109 aa9.36□□□□□ -0.91
CHMP4BP1-201ENST00000556017 S100ZQ8WXG8 99 aa9.36□□□□□ -0.91
CHMP4BP1-201ENST00000556017 PET100P0DJ07 73 aa9.35□□□□□ -0.91
CHMP4BP1-201ENST00000556017 CRIP1P50238 77 aa9.35□□□□□ -0.91
CHMP4BP1-201ENST00000556017 DMRTA1Q5VZB9 504 aa9.35□□□□□ -0.91
CHMP4BP1-201ENST00000556017 TRAV34A0A0B4J273 112 aa9.34□□□□□ -0.91
CHMP4BP1-201ENST00000556017 A8MWV9 139 aa9.34□□□□□ -0.91
CHMP4BP1-201ENST00000556017 ATRAIDQ6UW56 229 aa9.34□□□□□ -0.91
CHMP4BP1-201ENST00000556017 SSNA1O43805 119 aa9.33□□□□□ -0.92
CHMP4BP1-201ENST00000556017 ATP6V0CP27449 155 aa9.33□□□□□ -0.92
CHMP4BP1-201ENST00000556017 HNRNPA3P51991 378 aaKnown RBP9.33□□□□□ -0.92
CHMP4BP1-201ENST00000556017 DNLZQ5SXM8 178 aa9.33□□□□□ -0.92
CHMP4BP1-201ENST00000556017 HSD17B11Q8NBQ5 300 aa9.33□□□□□ -0.92
CHMP4BP1-201ENST00000556017 PSMG3Q9BT73 122 aaPredicted RBP9.33□□□□□ -0.92
CHMP4BP1-201ENST00000556017 SH3BGRL3Q9H299 93 aa9.33□□□□□ -0.92
CHMP4BP1-201ENST00000556017 IL36BQ9NZH7 164 aa9.33□□□□□ -0.92
CHMP4BP1-201ENST00000556017 KLK12Q9UKR0 248 aa9.33□□□□□ -0.92
CHMP4BP1-201ENST00000556017 ARL2-SNX15V9GYD0 113 aa9.33□□□□□ -0.92
CHMP4BP1-201ENST00000556017 A0A087WWC5 75 aa9.32□□□□□ -0.92
CHMP4BP1-201ENST00000556017 RBFOX3A6NFN3 312 aa9.32□□□□□ -0.92
CHMP4BP1-201ENST00000556017 ZNF726P1Q15940 193 aa9.32□□□□□ -0.92
CHMP4BP1-201ENST00000556017 LGALSLQ3ZCW2 172 aaPredicted RBP9.32□□□□□ -0.92
CHMP4BP1-201ENST00000556017 SERTAD4-AS1Q5TG53 156 aa9.32□□□□□ -0.92
CHMP4BP1-201ENST00000556017 Q8N976 141 aa9.32□□□□□ -0.92
CHMP4BP1-201ENST00000556017 COX11Q9Y6N1 276 aa9.32□□□□□ -0.92
CHMP4BP1-201ENST00000556017 IGKV2D-24A0A075B6R9 120 aa9.31□□□□□ -0.92
CHMP4BP1-201ENST00000556017 KRBOX1C9JBD0 128 aa9.31□□□□□ -0.92
CHMP4BP1-201ENST00000556017 H3BVH4 76 aa9.31□□□□□ -0.92
CHMP4BP1-201ENST00000556017 OXTP01178 125 aa9.31□□□□□ -0.92
CHMP4BP1-201ENST00000556017 TOR2AQ5JU69 321 aa9.31□□□□□ -0.92
CHMP4BP1-201ENST00000556017 SAPCD1Q5SSQ6 148 aa9.31□□□□□ -0.92
CHMP4BP1-201ENST00000556017 A0A1W2PRE2 83 aa9.3□□□□□ -0.92
CHMP4BP1-201ENST00000556017 FABP5P3A8MUU1 101 aa9.3□□□□□ -0.92
CHMP4BP1-201ENST00000556017 K7EQM0 130 aa9.3□□□□□ -0.92
CHMP4BP1-201ENST00000556017 ASIPP42127 132 aa9.3□□□□□ -0.92
CHMP4BP1-201ENST00000556017 FGF8P55075 233 aaPredicted RBP9.3□□□□□ -0.92
CHMP4BP1-201ENST00000556017 ZFP69Q49AA0 526 aa9.3□□□□□ -0.92
CHMP4BP1-201ENST00000556017 Q5BKY6 102 aa9.3□□□□□ -0.92
CHMP4BP1-201ENST00000556017 COX8CQ7Z4L0 72 aa9.3□□□□□ -0.92
CHMP4BP1-201ENST00000556017 ZC2HC1AQ96GY0 325 aa9.3□□□□□ -0.92
CHMP4BP1-201ENST00000556017 AQP10Q96PS8 301 aa9.3□□□□□ -0.92
CHMP4BP1-201ENST00000556017 TMEM167BQ9NRX6 74 aa9.3□□□□□ -0.92
CHMP4BP1-201ENST00000556017 CXorf1O96002 111 aa9.29□□□□□ -0.92
CHMP4BP1-201ENST00000556017 IGLV2-8P01709 118 aa9.29□□□□□ -0.92
CHMP4BP1-201ENST00000556017 ARMS2P0C7Q2 107 aa9.29□□□□□ -0.92
CHMP4BP1-201ENST00000556017 S100A4P26447 101 aaKnown RBP9.29□□□□□ -0.92
CHMP4BP1-201ENST00000556017 ENHOQ6UWT2 76 aa9.29□□□□□ -0.92
CHMP4BP1-201ENST00000556017 Q86TA4 180 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms