RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 FAM231CP0DMU5 169 aa8.58□□□□□ -1.04
SYNE2-214ENST00000554928 MEF2BQ02080 365 aaPredicted RBP8.58□□□□□ -1.04
SYNE2-214ENST00000554928 FAM162BQ5T6X4 162 aa8.58□□□□□ -1.04
SYNE2-214ENST00000554928 TRBV20OR9-2A0A075B6H5 130 aa8.57□□□□□ -1.04
SYNE2-214ENST00000554928 A0A096LPF7 62 aa8.57□□□□□ -1.04
SYNE2-214ENST00000554928 TEX46H3BTG2 121 aa8.57□□□□□ -1.04
SYNE2-214ENST00000554928 H3BVH4 76 aa8.57□□□□□ -1.04
SYNE2-214ENST00000554928 CENPWQ5EE01 88 aa8.57□□□□□ -1.04
SYNE2-214ENST00000554928 ZNF506Q5JVG8 444 aa8.57□□□□□ -1.04
SYNE2-214ENST00000554928 UBE2DNLQ8IWF7 75 aa8.57□□□□□ -1.04
SYNE2-214ENST00000554928 LYPD6BQ8NI32 183 aa8.57□□□□□ -1.04
SYNE2-214ENST00000554928 JPT2Q9H910 190 aa8.57□□□□□ -1.04
SYNE2-214ENST00000554928 VAX2Q9UIW0 290 aa8.57□□□□□ -1.04
SYNE2-214ENST00000554928 LINC00588Q9Y4M8 146 aa8.57□□□□□ -1.04
SYNE2-214ENST00000554928 IGLV2-18A0A075B6J9 118 aa8.56□□□□□ -1.04
SYNE2-214ENST00000554928 IGHV3-73A0A0B4J1V6 119 aa8.56□□□□□ -1.04
SYNE2-214ENST00000554928 TRAV4A0A0B4J268 109 aa8.56□□□□□ -1.04
SYNE2-214ENST00000554928 M0R2N4 97 aa8.56□□□□□ -1.04
SYNE2-214ENST00000554928 IFNA1P01562 189 aa8.56□□□□□ -1.04
SYNE2-214ENST00000554928 S100A9P06702 114 aaKnown RBP8.56□□□□□ -1.04
SYNE2-214ENST00000554928 ASIPP42127 132 aa8.56□□□□□ -1.04
SYNE2-214ENST00000554928 CRYBA4P53673 196 aa8.56□□□□□ -1.04
SYNE2-214ENST00000554928 BLOC1S1P78537 153 aa8.56□□□□□ -1.04
SYNE2-214ENST00000554928 ZNF876PQ49A33 203 aa8.56□□□□□ -1.04
SYNE2-214ENST00000554928 PRR27Q6MZM9 219 aa8.56□□□□□ -1.04
SYNE2-214ENST00000554928 MED9Q9NWA0 146 aa8.56□□□□□ -1.04
SYNE2-214ENST00000554928 FRAS1Q86XX4 4008 aa8.56□□□□□ -1.04
SYNE2-214ENST00000554928 TRGV4A0A0C4DH28 118 aa8.55□□□□□ -1.04
SYNE2-214ENST00000554928 LOC100131303A0A0U1RQF7 123 aa8.55□□□□□ -1.04
SYNE2-214ENST00000554928 RS1O15537 224 aa8.55□□□□□ -1.04
SYNE2-214ENST00000554928 PAX4O43316 350 aa8.55□□□□□ -1.04
SYNE2-214ENST00000554928 ARMS2P0C7Q2 107 aa8.55□□□□□ -1.04
SYNE2-214ENST00000554928 ESRGQ1W209 222 aa8.55□□□□□ -1.04
SYNE2-214ENST00000554928 CFAP126Q5VTH2 177 aa8.55□□□□□ -1.04
SYNE2-214ENST00000554928 OR4C5Q8NGB2 326 aa8.55□□□□□ -1.04
SYNE2-214ENST00000554928 TXNDC17Q9BRA2 123 aa8.55□□□□□ -1.04
SYNE2-214ENST00000554928 HHLA3Q9XRX5 114 aa8.55□□□□□ -1.04
SYNE2-214ENST00000554928 NACAE9PAV3 2078 aa8.54□□□□□ -1.04
SYNE2-214ENST00000554928 RBFOX3A6NFN3 312 aa8.54□□□□□ -1.04
SYNE2-214ENST00000554928 PDE6DO43924 150 aa8.54□□□□□ -1.04
SYNE2-214ENST00000554928 S100A4P26447 101 aaKnown RBP8.54□□□□□ -1.04
SYNE2-214ENST00000554928 TOR2AQ5JU69 321 aa8.54□□□□□ -1.04
SYNE2-214ENST00000554928 DNLZQ5SXM8 178 aa8.54□□□□□ -1.04
SYNE2-214ENST00000554928 Q6ZSN1 163 aa8.54□□□□□ -1.04
SYNE2-214ENST00000554928 SAMD10Q9BYL1 202 aa8.54□□□□□ -1.04
SYNE2-214ENST00000554928 SCRT2Q9NQ03 307 aa8.54□□□□□ -1.04
SYNE2-214ENST00000554928 IL36BQ9NZH7 164 aa8.54□□□□□ -1.04
SYNE2-214ENST00000554928 PRO0255Q9UI72 69 aa8.54□□□□□ -1.04
SYNE2-214ENST00000554928 H3BNG1 76 aa8.53□□□□□ -1.04
SYNE2-214ENST00000554928 MGST1P10620 155 aaKnown RBP8.53□□□□□ -1.04
SYNE2-214ENST00000554928 RNF212Q495C1 297 aa8.53□□□□□ -1.04
SYNE2-214ENST00000554928 ZNRF2Q8NHG8 242 aa8.53□□□□□ -1.04
SYNE2-214ENST00000554928 PTH2Q96A98 100 aa8.53□□□□□ -1.04
SYNE2-214ENST00000554928 MUC21A0A0G2JKD1 596 aa8.52□□□□□ -1.05
SYNE2-214ENST00000554928 MUC21A0A140T8X8 626 aa8.52□□□□□ -1.05
SYNE2-214ENST00000554928 GZMBP10144 247 aa8.52□□□□□ -1.05
SYNE2-214ENST00000554928 GATA1P15976 413 aaPredicted RBP8.52□□□□□ -1.05
SYNE2-214ENST00000554928 GNG4P50150 75 aa8.52□□□□□ -1.05
SYNE2-214ENST00000554928 TEX261Q6UWH6 196 aa8.52□□□□□ -1.05
SYNE2-214ENST00000554928 PARLQ9H300 379 aa8.52□□□□□ -1.05
SYNE2-214ENST00000554928 Q9UF83 564 aa8.52□□□□□ -1.05
SYNE2-214ENST00000554928 DNAH11Q96DT5 4516 aa8.52□□□□□ -1.05
SYNE2-214ENST00000554928 DYNC1H1Q14204 4646 aaKnown RBP8.52□□□□□ -1.05
SYNE2-214ENST00000554928 C19orf71A6NCJ1 209 aa8.51□□□□□ -1.05
SYNE2-214ENST00000554928 K7EN84 100 aa8.51□□□□□ -1.05
SYNE2-214ENST00000554928 K7EQD1 137 aa8.51□□□□□ -1.05
SYNE2-214ENST00000554928 GYPEP15421 78 aa8.51□□□□□ -1.05
SYNE2-214ENST00000554928 CCL18P55774 89 aa8.51□□□□□ -1.05
SYNE2-214ENST00000554928 UFSP1Q6NVU6 142 aa8.51□□□□□ -1.05
SYNE2-214ENST00000554928 Q6ZR54 194 aa8.51□□□□□ -1.05
SYNE2-214ENST00000554928 SLC25A29Q8N8R3 303 aa8.51□□□□□ -1.05
SYNE2-214ENST00000554928 OR10AG1Q8NH19 301 aa8.51□□□□□ -1.05
SYNE2-214ENST00000554928 ICOSQ9Y6W8 199 aa8.51□□□□□ -1.05
SYNE2-214ENST00000554928 C9JQL5 133 aa8.5□□□□□ -1.05
SYNE2-214ENST00000554928 M0R381 172 aa8.5□□□□□ -1.05
SYNE2-214ENST00000554928 TAGLN2P37802 199 aaKnown RBP8.5□□□□□ -1.05
SYNE2-214ENST00000554928 CEBPGP53567 150 aa8.5□□□□□ -1.05
SYNE2-214ENST00000554928 OCC1Q8TAD7 63 aa8.5□□□□□ -1.05
SYNE2-214ENST00000554928 FAM210AQ96ND0 272 aa8.5□□□□□ -1.05
SYNE2-214ENST00000554928 A0A087WWL8 130 aa8.49□□□□□ -1.05
SYNE2-214ENST00000554928 SSTP61278 116 aa8.49□□□□□ -1.05
SYNE2-214ENST00000554928 SRSF3P84103 164 aaKnown RBP8.49□□□□□ -1.05
SYNE2-214ENST00000554928 SLAQ13239 276 aa8.49□□□□□ -1.05
SYNE2-214ENST00000554928 KRTAP1-5Q9BYS1 174 aa8.49□□□□□ -1.05
SYNE2-214ENST00000554928 MRPS16Q9Y3D3 137 aaKnown RBP8.49□□□□□ -1.05
SYNE2-214ENST00000554928 PHLDA3Q9Y5J5 127 aa8.49□□□□□ -1.05
SYNE2-214ENST00000554928 TMEM250H0YL14 139 aa8.48□□□□□ -1.05
SYNE2-214ENST00000554928 RTL8CO15255 209 aa8.48□□□□□ -1.05
SYNE2-214ENST00000554928 SNAI2O43623 268 aa8.48□□□□□ -1.05
SYNE2-214ENST00000554928 CRYGDP07320 174 aa8.48□□□□□ -1.05
SYNE2-214ENST00000554928 SRP19P09132 144 aaKnown RBP8.48□□□□□ -1.05
SYNE2-214ENST00000554928 CXCL1P09341 107 aa8.48□□□□□ -1.05
SYNE2-214ENST00000554928 MRPL23Q16540 153 aaKnown RBP8.48□□□□□ -1.05
SYNE2-214ENST00000554928 LYPD5Q6UWN5 251 aa8.48□□□□□ -1.05
SYNE2-214ENST00000554928 C14orf178Q8N769 122 aaPredicted RBP8.48□□□□□ -1.05
SYNE2-214ENST00000554928 NUDT10Q8NFP7 164 aa8.48□□□□□ -1.05
SYNE2-214ENST00000554928 OR2D3Q8NGH3 330 aa8.48□□□□□ -1.05
SYNE2-214ENST00000554928 NUDT11Q96G61 164 aa8.48□□□□□ -1.05
SYNE2-214ENST00000554928 SFRP2Q96HF1 295 aa8.48□□□□□ -1.05
SYNE2-214ENST00000554928 SSBP4Q9BWG4 385 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms