RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 GNRH2O43555 120 aa4.23□□□□□ -1.73
ATXN3-230ENST00000554673 IGKV3-20P01619 116 aa4.23□□□□□ -1.73
ATXN3-230ENST00000554673 ARMS2P0C7Q2 107 aa4.23□□□□□ -1.73
ATXN3-230ENST00000554673 RNASE3P12724 160 aaKnown RBP4.23□□□□□ -1.73
ATXN3-230ENST00000554673 IGLL1P15814 213 aa4.23□□□□□ -1.73
ATXN3-230ENST00000554673 LINC00315P59091 139 aa4.23□□□□□ -1.73
ATXN3-230ENST00000554673 HIST1H1AQ02539 215 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-230ENST00000554673 SLAQ13239 276 aa4.23□□□□□ -1.73
ATXN3-230ENST00000554673 SPINK13Q1W4C9 94 aa4.23□□□□□ -1.73
ATXN3-230ENST00000554673 PAPPA-AS1Q5QFB9 102 aa4.23□□□□□ -1.73
ATXN3-230ENST00000554673 Q6AWC8 147 aa4.23□□□□□ -1.73
ATXN3-230ENST00000554673 TRPT1Q86TN4 253 aaKnown RBP4.23□□□□□ -1.73
ATXN3-230ENST00000554673 GATD1Q8NB37 220 aa4.23□□□□□ -1.73
ATXN3-230ENST00000554673 TCEAL7Q9BRU2 100 aa4.23□□□□□ -1.73
ATXN3-230ENST00000554673 JPT2Q9H910 190 aa4.23□□□□□ -1.73
ATXN3-230ENST00000554673 Q9UF83 564 aa4.23□□□□□ -1.73
ATXN3-230ENST00000554673 HUWE1Q7Z6Z7 4374 aaKnown RBP4.23□□□□□ -1.73
ATXN3-230ENST00000554673 TRAV2A0A0B4J234 112 aa4.22□□□□□ -1.73
ATXN3-230ENST00000554673 B4DEV8 164 aa4.22□□□□□ -1.73
ATXN3-230ENST00000554673 TRGC2P03986 189 aa4.22□□□□□ -1.73
ATXN3-230ENST00000554673 HLA-DRB4P13762 266 aa4.22□□□□□ -1.73
ATXN3-230ENST00000554673 GATA1P15976 413 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-230ENST00000554673 AZU1P20160 251 aa4.22□□□□□ -1.73
ATXN3-230ENST00000554673 CTRLP40313 264 aa4.22□□□□□ -1.73
ATXN3-230ENST00000554673 ZNF415Q09FC8 603 aa4.22□□□□□ -1.73
ATXN3-230ENST00000554673 ACTL10Q5JWF8 245 aa4.22□□□□□ -1.73
ATXN3-230ENST00000554673 IBA57Q5T440 356 aaKnown RBP4.22□□□□□ -1.73
ATXN3-230ENST00000554673 C15orf54Q8N8G6 183 aa4.22□□□□□ -1.73
ATXN3-230ENST00000554673 CSNK1G2-AS1Q8NCQ2 148 aa4.22□□□□□ -1.73
ATXN3-230ENST00000554673 DPF1Q92782 380 aa4.22□□□□□ -1.73
ATXN3-230ENST00000554673 RNF185Q96GF1 192 aa4.22□□□□□ -1.73
ATXN3-230ENST00000554673 RPP21Q9H633 154 aaKnown RBP4.22□□□□□ -1.73
ATXN3-230ENST00000554673 SCRT2Q9NQ03 307 aa4.22□□□□□ -1.73
ATXN3-230ENST00000554673 MDFICQ9P1T7 246 aa4.22□□□□□ -1.73
ATXN3-230ENST00000554673 PRELID1Q9Y255 219 aa4.22□□□□□ -1.73
ATXN3-230ENST00000554673 KIF25-AS1Q9Y6Z4 181 aa4.22□□□□□ -1.73
ATXN3-230ENST00000554673 HLA-DRB4X5D2U9 266 aa4.22□□□□□ -1.73
ATXN3-230ENST00000554673 A0A1W2PS18 150 aa4.21□□□□□ -1.74
ATXN3-230ENST00000554673 HIGD1CA8MV81 97 aa4.21□□□□□ -1.74
ATXN3-230ENST00000554673 H0Y8G0 127 aa4.21□□□□□ -1.74
ATXN3-230ENST00000554673 GATCO43716 136 aaKnown RBP4.21□□□□□ -1.74
ATXN3-230ENST00000554673 HIST1H2BKO60814 126 aa4.21□□□□□ -1.74
ATXN3-230ENST00000554673 HIST1H2BJP06899 126 aa4.21□□□□□ -1.74
ATXN3-230ENST00000554673 HIST1H2BOP23527 126 aa4.21□□□□□ -1.74
ATXN3-230ENST00000554673 HIST1H2BBP33778 126 aa4.21□□□□□ -1.74
ATXN3-230ENST00000554673 HIST1H2BDP58876 126 aa4.21□□□□□ -1.74
ATXN3-230ENST00000554673 ERVFC1-1P60608 527 aa4.21□□□□□ -1.74
ATXN3-230ENST00000554673 HIST1H2BCP62807 126 aa4.21□□□□□ -1.74
ATXN3-230ENST00000554673 HIST2H2BEQ16778 126 aa4.21□□□□□ -1.74
ATXN3-230ENST00000554673 KIAA1644Q3SXP7 199 aa4.21□□□□□ -1.74
ATXN3-230ENST00000554673 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.21□□□□□ -1.74
ATXN3-230ENST00000554673 MRPL54Q6P161 138 aaKnown RBP4.21□□□□□ -1.74
ATXN3-230ENST00000554673 FOXI2Q6ZQN5 318 aa4.21□□□□□ -1.74
ATXN3-230ENST00000554673 C11orf72Q8NBR9 251 aa4.21□□□□□ -1.74
ATXN3-230ENST00000554673 NEXN-AS1Q8NBZ9 246 aa4.21□□□□□ -1.74
ATXN3-230ENST00000554673 OR2D3Q8NGH3 330 aa4.21□□□□□ -1.74
ATXN3-230ENST00000554673 OR10AG1Q8NH19 301 aa4.21□□□□□ -1.74
ATXN3-230ENST00000554673 CMTM2Q8TAZ6 248 aa4.21□□□□□ -1.74
ATXN3-230ENST00000554673 TSKUQ8WUA8 353 aa4.21□□□□□ -1.74
ATXN3-230ENST00000554673 HIST1H2BHQ93079 126 aa4.21□□□□□ -1.74
ATXN3-230ENST00000554673 SMIM12Q96EX1 92 aa4.21□□□□□ -1.74
ATXN3-230ENST00000554673 FAM210BQ96KR6 192 aa4.21□□□□□ -1.74
ATXN3-230ENST00000554673 PGLYRP4Q96LB8 373 aa4.21□□□□□ -1.74
ATXN3-230ENST00000554673 C9orf85Q96MD7 179 aa4.21□□□□□ -1.74
ATXN3-230ENST00000554673 HIST1H2BNQ99877 126 aa4.21□□□□□ -1.74
ATXN3-230ENST00000554673 HIST1H2BMQ99879 126 aa4.21□□□□□ -1.74
ATXN3-230ENST00000554673 CNFNQ9BYD5 112 aa4.21□□□□□ -1.74
ATXN3-230ENST00000554673 VCX2Q9H322 139 aa4.21□□□□□ -1.74
ATXN3-230ENST00000554673 ZFP30Q9Y2G7 519 aa4.21□□□□□ -1.74
ATXN3-230ENST00000554673 DNAH9Q9NYC9 4486 aa4.21□□□□□ -1.74
ATXN3-230ENST00000554673 DNHD1Q96M86 4753 aa4.21□□□□□ -1.74
ATXN3-230ENST00000554673 TRAV12-3A0A0B4J271 114 aa4.2□□□□□ -1.74
ATXN3-230ENST00000554673 IGHV3-16A0A0C4DH30 117 aa4.2□□□□□ -1.74
ATXN3-230ENST00000554673 ZNF705GA8MUZ8 300 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-230ENST00000554673 SNAI2O43623 268 aa4.2□□□□□ -1.74
ATXN3-230ENST00000554673 SAP30O75446 220 aa4.2□□□□□ -1.74
ATXN3-230ENST00000554673 NXPH4O95158 308 aa4.2□□□□□ -1.74
ATXN3-230ENST00000554673 MT-ND4LP03901 98 aa4.2□□□□□ -1.74
ATXN3-230ENST00000554673 TRGC1P0CF51 173 aa4.2□□□□□ -1.74
ATXN3-230ENST00000554673 RNASE4P34096 147 aaKnown RBP4.2□□□□□ -1.74
ATXN3-230ENST00000554673 MEOX2P50222 304 aa4.2□□□□□ -1.74
ATXN3-230ENST00000554673 UBE2G1P62253 170 aa4.2□□□□□ -1.74
ATXN3-230ENST00000554673 IQCJQ1A5X6 159 aa4.2□□□□□ -1.74
ATXN3-230ENST00000554673 DNLZQ5SXM8 178 aa4.2□□□□□ -1.74
ATXN3-230ENST00000554673 SUMO4Q6EEV6 95 aa4.2□□□□□ -1.74
ATXN3-230ENST00000554673 MORN3Q6PF18 240 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-230ENST00000554673 LYZL1Q6UWQ5 148 aa4.2□□□□□ -1.74
ATXN3-230ENST00000554673 TMEM256Q8N2U0 113 aa4.2□□□□□ -1.74
ATXN3-230ENST00000554673 DEFB125Q8N687 156 aa4.2□□□□□ -1.74
ATXN3-230ENST00000554673 POM121L12Q8N7R1 296 aa4.2□□□□□ -1.74
ATXN3-230ENST00000554673 RCHY1Q96PM5 261 aa4.2□□□□□ -1.74
ATXN3-230ENST00000554673 ODF3Q96PU9 254 aa4.2□□□□□ -1.74
ATXN3-230ENST00000554673 SAMD10Q9BYL1 202 aa4.2□□□□□ -1.74
ATXN3-230ENST00000554673 CLEC5AQ9NY25 188 aa4.2□□□□□ -1.74
ATXN3-230ENST00000554673 RNF24Q9Y225 148 aa4.2□□□□□ -1.74
ATXN3-230ENST00000554673 PAM16Q9Y3D7 125 aa4.2□□□□□ -1.74
ATXN3-230ENST00000554673 NOTCH1P46531 2555 aa4.2□□□□□ -1.74
ATXN3-230ENST00000554673 NBEAL2Q6ZNJ1 2754 aa4.19□□□□□ -1.74
ATXN3-230ENST00000554673 TRAV25A0A0B4J276 109 aa4.19□□□□□ -1.74
ATXN3-230ENST00000554673 SERTM2A0A1B0GWG4 89 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms