RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 FAM3BP58499 235 aaPredicted RBP7.51□□□□□ -1.21
SHMT2-215ENST00000554656 Q6AWC8 147 aa7.51□□□□□ -1.21
SHMT2-215ENST00000554656 RASL11AQ6T310 242 aa7.51□□□□□ -1.21
SHMT2-215ENST00000554656 FOXI2Q6ZQN5 318 aa7.51□□□□□ -1.21
SHMT2-215ENST00000554656 C1orf158Q8N1D5 194 aa7.51□□□□□ -1.21
SHMT2-215ENST00000554656 FAM19A4Q96LR4 140 aa7.51□□□□□ -1.21
SHMT2-215ENST00000554656 C8orf49Q96NF6 230 aa7.51□□□□□ -1.21
SHMT2-215ENST00000554656 CLUHP3Q96NS8 147 aa7.51□□□□□ -1.21
SHMT2-215ENST00000554656 NDUFAF3Q9BU61 184 aa7.51□□□□□ -1.21
SHMT2-215ENST00000554656 DKK2Q9UBU2 259 aa7.51□□□□□ -1.21
SHMT2-215ENST00000554656 TGIF2-C20orf24A0A0A6YYL0 155 aa7.5□□□□□ -1.21
SHMT2-215ENST00000554656 A0A0J9YX75 114 aa7.5□□□□□ -1.21
SHMT2-215ENST00000554656 CRIP1P50238 77 aa7.5□□□□□ -1.21
SHMT2-215ENST00000554656 FOXA3P55318 350 aaPredicted RBP7.5□□□□□ -1.21
SHMT2-215ENST00000554656 ERCC8Q13216 396 aa7.5□□□□□ -1.21
SHMT2-215ENST00000554656 FAM222AQ5U5X8 452 aa7.5□□□□□ -1.21
SHMT2-215ENST00000554656 EBLN2Q6P2I7 272 aa7.5□□□□□ -1.21
SHMT2-215ENST00000554656 Q6ZR54 194 aa7.5□□□□□ -1.21
SHMT2-215ENST00000554656 ATP5L2Q7Z4Y8 100 aa7.5□□□□□ -1.21
SHMT2-215ENST00000554656 Q8TAT8 98 aa7.5□□□□□ -1.21
SHMT2-215ENST00000554656 NAT8BQ9UHF3 227 aa7.5□□□□□ -1.21
SHMT2-215ENST00000554656 SMIM9A6NGZ8 99 aa7.49□□□□□ -1.21
SHMT2-215ENST00000554656 PRSS29PA6NIE9 313 aa7.49□□□□□ -1.21
SHMT2-215ENST00000554656 C1orf196B1AJZ1 125 aa7.49□□□□□ -1.21
SHMT2-215ENST00000554656 SH2D1AO60880 128 aa7.49□□□□□ -1.21
SHMT2-215ENST00000554656 SPART-AS1P0CW21 52 aa7.49□□□□□ -1.21
SHMT2-215ENST00000554656 RPS10P46783 165 aaKnown RBP7.49□□□□□ -1.21
SHMT2-215ENST00000554656 LINC01559Q495D7 138 aa7.49□□□□□ -1.21
SHMT2-215ENST00000554656 AMTNQ6UX39 209 aa7.49□□□□□ -1.21
SHMT2-215ENST00000554656 OR2D3Q8NGH3 330 aa7.49□□□□□ -1.21
SHMT2-215ENST00000554656 DYNC1H1Q14204 4646 aaKnown RBP7.48□□□□□ -1.21
SHMT2-215ENST00000554656 IGLV2-18A0A075B6J9 118 aa7.48□□□□□ -1.21
SHMT2-215ENST00000554656 TMEM189A5PLL7 270 aa7.48□□□□□ -1.21
SHMT2-215ENST00000554656 MT-ND6P03923 174 aa7.48□□□□□ -1.21
SHMT2-215ENST00000554656 TSPOP30536 169 aa7.48□□□□□ -1.21
SHMT2-215ENST00000554656 LEPP41159 167 aa7.48□□□□□ -1.21
SHMT2-215ENST00000554656 RAB5BP61020 215 aa7.48□□□□□ -1.21
SHMT2-215ENST00000554656 LGALS9BQ3B8N2 356 aa7.48□□□□□ -1.21
SHMT2-215ENST00000554656 WDR73Q6P4I2 378 aa7.48□□□□□ -1.21
SHMT2-215ENST00000554656 ZFAND2AQ8N6M9 145 aa7.48□□□□□ -1.21
SHMT2-215ENST00000554656 DNAH11Q96DT5 4516 aa7.48□□□□□ -1.21
SHMT2-215ENST00000554656 TRAV21A0A0B4J279 112 aa7.47□□□□□ -1.21
SHMT2-215ENST00000554656 A0A1B0GW15 77 aa7.47□□□□□ -1.21
SHMT2-215ENST00000554656 HIGD1CA8MV81 97 aa7.47□□□□□ -1.21
SHMT2-215ENST00000554656 KLLNB2CW77 178 aa7.47□□□□□ -1.21
SHMT2-215ENST00000554656 PRM2P04554 102 aa7.47□□□□□ -1.21
SHMT2-215ENST00000554656 HTN3P15516 51 aa7.47□□□□□ -1.21
SHMT2-215ENST00000554656 ZNF80P51504 273 aaPredicted RBP7.47□□□□□ -1.21
SHMT2-215ENST00000554656 NUP35Q8NFH5 326 aa7.47□□□□□ -1.21
SHMT2-215ENST00000554656 GNB1LQ9BYB4 327 aa7.47□□□□□ -1.21
SHMT2-215ENST00000554656 S100A8P05109 93 aa7.46□□□□□ -1.22
SHMT2-215ENST00000554656 GPX1P07203 203 aa7.46□□□□□ -1.22
SHMT2-215ENST00000554656 MED14OSP0DP75 135 aa7.46□□□□□ -1.22
SHMT2-215ENST00000554656 GOLT1BQ9Y3E0 138 aa7.46□□□□□ -1.22
SHMT2-215ENST00000554656 TEX48A0A1B0GUV7 120 aa7.45□□□□□ -1.22
SHMT2-215ENST00000554656 A0A1B0GXF2 115 aa7.45□□□□□ -1.22
SHMT2-215ENST00000554656 M0R2Z0 102 aa7.45□□□□□ -1.22
SHMT2-215ENST00000554656 CRXO43186 299 aaPredicted RBP7.45□□□□□ -1.22
SHMT2-215ENST00000554656 HLA-DQA1P01909 254 aa7.45□□□□□ -1.22
SHMT2-215ENST00000554656 IGLC6P0CF74 106 aa7.45□□□□□ -1.22
SHMT2-215ENST00000554656 TCL1AP56279 114 aa7.45□□□□□ -1.22
SHMT2-215ENST00000554656 DNLZQ5SXM8 178 aa7.45□□□□□ -1.22
SHMT2-215ENST00000554656 ZNF575Q86XF7 245 aa7.45□□□□□ -1.22
SHMT2-215ENST00000554656 UBE2DNLQ8IWF7 75 aa7.45□□□□□ -1.22
SHMT2-215ENST00000554656 GTSF1Q8WW33 167 aa7.45□□□□□ -1.22
SHMT2-215ENST00000554656 KRTAP4-5Q9BYR2 181 aa7.45□□□□□ -1.22
SHMT2-215ENST00000554656 TMA7Q9Y2S6 64 aaKnown RBP7.45□□□□□ -1.22
SHMT2-215ENST00000554656 A0A1B0GUT8 65 aa7.44□□□□□ -1.22
SHMT2-215ENST00000554656 PLAC8L1A1L4L8 177 aa7.44□□□□□ -1.22
SHMT2-215ENST00000554656 F2Z2F3 143 aa7.44□□□□□ -1.22
SHMT2-215ENST00000554656 PHOX2AO14813 284 aa7.44□□□□□ -1.22
SHMT2-215ENST00000554656 ORM1P02763 201 aa7.44□□□□□ -1.22
SHMT2-215ENST00000554656 TRGC2P03986 189 aa7.44□□□□□ -1.22
SHMT2-215ENST00000554656 PRB4P10163 310 aaPredicted RBP7.44□□□□□ -1.22
SHMT2-215ENST00000554656 CTRLP40313 264 aa7.44□□□□□ -1.22
SHMT2-215ENST00000554656 CDKN1BP46527 198 aa7.44□□□□□ -1.22
SHMT2-215ENST00000554656 HBBP68871 147 aa7.44□□□□□ -1.22
SHMT2-215ENST00000554656 RIGQ13278 110 aa7.44□□□□□ -1.22
SHMT2-215ENST00000554656 SPINK13Q1W4C9 94 aa7.44□□□□□ -1.22
SHMT2-215ENST00000554656 RRN3P1Q2M238 152 aa7.44□□□□□ -1.22
SHMT2-215ENST00000554656 GATD1Q8NB37 220 aa7.44□□□□□ -1.22
SHMT2-215ENST00000554656 BORCS7Q96B45 105 aa7.44□□□□□ -1.22
SHMT2-215ENST00000554656 KCNS1Q96KK3 526 aa7.44□□□□□ -1.22
SHMT2-215ENST00000554656 CNFNQ9BYD5 112 aa7.44□□□□□ -1.22
SHMT2-215ENST00000554656 RYR1P21817 5038 aa7.43□□□□□ -1.22
SHMT2-215ENST00000554656 C7orf71A4D174 169 aa7.43□□□□□ -1.22
SHMT2-215ENST00000554656 DAD1P61803 113 aa7.43□□□□□ -1.22
SHMT2-215ENST00000554656 PRR9Q5T870 116 aa7.43□□□□□ -1.22
SHMT2-215ENST00000554656 TMEM136Q6ZRR5 245 aa7.43□□□□□ -1.22
SHMT2-215ENST00000554656 FER1L6-AS1Q8NA97 138 aa7.43□□□□□ -1.22
SHMT2-215ENST00000554656 C20orf144Q9BQM9 153 aa7.43□□□□□ -1.22
SHMT2-215ENST00000554656 TRAPPC1Q9Y5R8 145 aa7.43□□□□□ -1.22
SHMT2-215ENST00000554656 IGKV3D-20A0A0C4DH25 116 aa7.42□□□□□ -1.22
SHMT2-215ENST00000554656 SNURFLB1AK76 121 aa7.42□□□□□ -1.22
SHMT2-215ENST00000554656 SNAI2O43623 268 aa7.42□□□□□ -1.22
SHMT2-215ENST00000554656 OR5AL1P0C617 328 aa7.42□□□□□ -1.22
SHMT2-215ENST00000554656 GZMBP10144 247 aa7.42□□□□□ -1.22
SHMT2-215ENST00000554656 AZU1P20160 251 aa7.42□□□□□ -1.22
SHMT2-215ENST00000554656 TDRG1Q3Y452 100 aa7.42□□□□□ -1.22
SHMT2-215ENST00000554656 MRPL54Q6P161 138 aaKnown RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms