RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 KMT2AQ03164 3969 aa9.26□□□□□ -0.93
SHMT2-211ENST00000554310 IGKV2-40A0A087WW87 121 aaPredicted RBP9.26□□□□□ -0.93
SHMT2-211ENST00000554310 TRAV12-3A0A0B4J271 114 aa9.26□□□□□ -0.93
SHMT2-211ENST00000554310 SERTM2A0A1B0GWG4 89 aa9.26□□□□□ -0.93
SHMT2-211ENST00000554310 SMIM27A0A1W2PRY6 76 aa9.26□□□□□ -0.93
SHMT2-211ENST00000554310 C7orf71A4D174 169 aa9.26□□□□□ -0.93
SHMT2-211ENST00000554310 RBAKDNA6NC62 111 aa9.26□□□□□ -0.93
SHMT2-211ENST00000554310 KLLNB2CW77 178 aa9.26□□□□□ -0.93
SHMT2-211ENST00000554310 J3KRW8 73 aa9.26□□□□□ -0.93
SHMT2-211ENST00000554310 K7EQM0 130 aa9.26□□□□□ -0.93
SHMT2-211ENST00000554310 IGKV2D-40P01614 121 aaPredicted RBP9.26□□□□□ -0.93
SHMT2-211ENST00000554310 CRISP2P16562 243 aa9.26□□□□□ -0.93
SHMT2-211ENST00000554310 CSN1S1P47710 185 aa9.26□□□□□ -0.93
SHMT2-211ENST00000554310 Q86TA4 180 aa9.26□□□□□ -0.93
SHMT2-211ENST00000554310 TMEM75Q8N9X5 138 aa9.26□□□□□ -0.93
SHMT2-211ENST00000554310 AGPAT4-IT1Q9H0P7 198 aa9.26□□□□□ -0.93
SHMT2-211ENST00000554310 RPH3ALQ9UNE2 315 aa9.26□□□□□ -0.93
SHMT2-211ENST00000554310 TIMM8BQ9Y5J9 83 aaPredicted RBP9.26□□□□□ -0.93
SHMT2-211ENST00000554310 VPS13DQ5THJ4 4388 aa9.25□□□□□ -0.93
SHMT2-211ENST00000554310 TRBV7-9A0A0J9YWB2 115 aa9.25□□□□□ -0.93
SHMT2-211ENST00000554310 IGLV2-11P01706 119 aa9.25□□□□□ -0.93
SHMT2-211ENST00000554310 P0DMU3 169 aa9.25□□□□□ -0.93
SHMT2-211ENST00000554310 FAM231AP0DMU4 169 aa9.25□□□□□ -0.93
SHMT2-211ENST00000554310 FAM231CP0DMU5 169 aa9.25□□□□□ -0.93
SHMT2-211ENST00000554310 DEFB130BP0DP73 79 aa9.25□□□□□ -0.93
SHMT2-211ENST00000554310 DEFB130AP0DP74 79 aa9.25□□□□□ -0.93
SHMT2-211ENST00000554310 HTN3P15516 51 aa9.25□□□□□ -0.93
SHMT2-211ENST00000554310 COA6Q5JTJ3 125 aaKnown RBP9.25□□□□□ -0.93
SHMT2-211ENST00000554310 TMEM183AQ8IXX5 376 aa9.25□□□□□ -0.93
SHMT2-211ENST00000554310 NHLRC2Q8NBF2 726 aa9.25□□□□□ -0.93
SHMT2-211ENST00000554310 NUDT10Q8NFP7 164 aa9.25□□□□□ -0.93
SHMT2-211ENST00000554310 NUDT11Q96G61 164 aa9.25□□□□□ -0.93
SHMT2-211ENST00000554310 TRAPPC1Q9Y5R8 145 aa9.25□□□□□ -0.93
SHMT2-211ENST00000554310 EPPK1P58107 5090 aaKnown RBP9.24□□□□□ -0.93
SHMT2-211ENST00000554310 FBLL1A6NHQ2 334 aaKnown RBP9.24□□□□□ -0.93
SHMT2-211ENST00000554310 DIRC3C9JPN6 131 aa9.24□□□□□ -0.93
SHMT2-211ENST00000554310 ATP5G1P05496 136 aa9.24□□□□□ -0.93
SHMT2-211ENST00000554310 ZNF138P52744 262 aa9.24□□□□□ -0.93
SHMT2-211ENST00000554310 CT83Q5H943 113 aa9.24□□□□□ -0.93
SHMT2-211ENST00000554310 GOLT1AQ6ZVE7 132 aa9.24□□□□□ -0.93
SHMT2-211ENST00000554310 VGLL1Q99990 258 aa9.24□□□□□ -0.93
SHMT2-211ENST00000554310 LINC00467Q9BRT7 94 aa9.24□□□□□ -0.93
SHMT2-211ENST00000554310 ZFP30Q9Y2G7 519 aa9.24□□□□□ -0.93
SHMT2-211ENST00000554310 DNAH6Q9C0G6 4158 aa9.23□□□□□ -0.93
SHMT2-211ENST00000554310 C19orf71A6NCJ1 209 aa9.23□□□□□ -0.93
SHMT2-211ENST00000554310 SNURFLB1AK76 121 aa9.23□□□□□ -0.93
SHMT2-211ENST00000554310 MT-ND6P03923 174 aa9.23□□□□□ -0.93
SHMT2-211ENST00000554310 GPX1P07203 203 aa9.23□□□□□ -0.93
SHMT2-211ENST00000554310 WDR73Q6P4I2 378 aa9.23□□□□□ -0.93
SHMT2-211ENST00000554310 RASL11AQ6T310 242 aa9.23□□□□□ -0.93
SHMT2-211ENST00000554310 HIST3H2BBQ8N257 126 aa9.23□□□□□ -0.93
SHMT2-211ENST00000554310 ZFAND2AQ8N6M9 145 aa9.23□□□□□ -0.93
SHMT2-211ENST00000554310 GNB1LQ9BYB4 327 aa9.23□□□□□ -0.93
SHMT2-211ENST00000554310 NOP10Q9NPE3 64 aaKnown RBP9.23□□□□□ -0.93
SHMT2-211ENST00000554310 PSG8Q9UQ74 426 aa9.23□□□□□ -0.93
SHMT2-211ENST00000554310 CBY3A6NI87 242 aa9.22□□□□□ -0.93
SHMT2-211ENST00000554310 SMIM6P0DI80 62 aa9.22□□□□□ -0.93
SHMT2-211ENST00000554310 RNASE4P34096 147 aaKnown RBP9.22□□□□□ -0.93
SHMT2-211ENST00000554310 PRR27Q6MZM9 219 aa9.22□□□□□ -0.93
SHMT2-211ENST00000554310 PRNTQ86SH4 94 aa9.22□□□□□ -0.93
SHMT2-211ENST00000554310 LINC00612Q8N6U2 182 aa9.22□□□□□ -0.93
SHMT2-211ENST00000554310 C15orf53Q8NAA6 179 aa9.22□□□□□ -0.93
SHMT2-211ENST00000554310 Q8TAT8 98 aa9.22□□□□□ -0.93
SHMT2-211ENST00000554310 TSKUQ8WUA8 353 aa9.22□□□□□ -0.93
SHMT2-211ENST00000554310 SGK494Q96LW2 274 aa9.22□□□□□ -0.93
SHMT2-211ENST00000554310 RPP21Q9H633 154 aaKnown RBP9.22□□□□□ -0.93
SHMT2-211ENST00000554310 TRAV8-1A0A0A6YYK1 113 aa9.21□□□□□ -0.94
SHMT2-211ENST00000554310 ZNF324O75467 553 aaPredicted RBP9.21□□□□□ -0.94
SHMT2-211ENST00000554310 DAZ2Q13117 558 aaKnown RBP9.21□□□□□ -0.94
SHMT2-211ENST00000554310 ANXA2RQ3ZCQ2 193 aa9.21□□□□□ -0.94
SHMT2-211ENST00000554310 PRR9Q5T870 116 aa9.21□□□□□ -0.94
SHMT2-211ENST00000554310 POM121L12Q8N7R1 296 aa9.21□□□□□ -0.94
SHMT2-211ENST00000554310 MRPL18Q9H0U6 180 aaKnown RBP9.21□□□□□ -0.94
SHMT2-211ENST00000554310 NAT8BQ9UHF3 227 aa9.21□□□□□ -0.94
SHMT2-211ENST00000554310 LENEPQ9Y5L5 61 aa9.21□□□□□ -0.94
SHMT2-211ENST00000554310 XKRY2A2RUG3 117 aa9.2□□□□□ -0.94
SHMT2-211ENST00000554310 FAM231BA6NCW3 169 aa9.2□□□□□ -0.94
SHMT2-211ENST00000554310 IFITM10A6NMD0 228 aa9.2□□□□□ -0.94
SHMT2-211ENST00000554310 A8MWL6 223 aa9.2□□□□□ -0.94
SHMT2-211ENST00000554310 F5H768 121 aa9.2□□□□□ -0.94
SHMT2-211ENST00000554310 P01737 135 aa9.2□□□□□ -0.94
SHMT2-211ENST00000554310 S100A2P29034 98 aa9.2□□□□□ -0.94
SHMT2-211ENST00000554310 COX8CQ7Z4L0 72 aa9.2□□□□□ -0.94
SHMT2-211ENST00000554310 DAZAP1Q96EP5 407 aaKnown RBP9.2□□□□□ -0.94
SHMT2-211ENST00000554310 C12orf57Q99622 126 aa9.2□□□□□ -0.94
SHMT2-211ENST00000554310 GFRA4Q9GZZ7 299 aa9.2□□□□□ -0.94
SHMT2-211ENST00000554310 HLA-DQA1P01909 254 aa9.19□□□□□ -0.94
SHMT2-211ENST00000554310 TCL1AP56279 114 aa9.19□□□□□ -0.94
SHMT2-211ENST00000554310 TMEM136Q6ZRR5 245 aa9.19□□□□□ -0.94
SHMT2-211ENST00000554310 ATP5L2Q7Z4Y8 100 aa9.19□□□□□ -0.94
SHMT2-211ENST00000554310 UBE2DNLQ8IWF7 75 aa9.19□□□□□ -0.94
SHMT2-211ENST00000554310 C11orf72Q8NBR9 251 aa9.19□□□□□ -0.94
SHMT2-211ENST00000554310 BIRC6Q9NR09 4857 aa9.19□□□□□ -0.94
SHMT2-211ENST00000554310 IGHV1OR15-1A0A075B7D0 117 aa9.18□□□□□ -0.94
SHMT2-211ENST00000554310 SAPCD1Q5SSQ6 148 aa9.18□□□□□ -0.94
SHMT2-211ENST00000554310 NUP35Q8NFH5 326 aa9.18□□□□□ -0.94
SHMT2-211ENST00000554310 ZC2HC1AQ96GY0 325 aa9.18□□□□□ -0.94
SHMT2-211ENST00000554310 GSN-AS1Q9NRJ2 163 aa9.18□□□□□ -0.94
SHMT2-211ENST00000554310 GAGE12BA1L429 117 aa9.17□□□□□ -0.94
SHMT2-211ENST00000554310 GAGE7O76087 117 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms