RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 DEFB104AQ8WTQ1 72 aa11.68□□□□□ -0.54
NEK9-204ENST00000554258 SMIM12Q96EX1 92 aa11.68□□□□□ -0.54
NEK9-204ENST00000554258 TRBV20OR9-2A0A075B6H5 130 aa11.67□□□□□ -0.54
NEK9-204ENST00000554258 SMIM9A6NGZ8 99 aa11.67□□□□□ -0.54
NEK9-204ENST00000554258 C9JCJ5 164 aa11.67□□□□□ -0.54
NEK9-204ENST00000554258 H7BYZ3 331 aa11.67□□□□□ -0.54
NEK9-204ENST00000554258 J3KRW8 73 aa11.67□□□□□ -0.54
NEK9-204ENST00000554258 CRIP1P50238 77 aa11.67□□□□□ -0.54
NEK9-204ENST00000554258 Q6ZQT7 251 aa11.67□□□□□ -0.54
NEK9-204ENST00000554258 PARLQ9H300 379 aa11.67□□□□□ -0.54
NEK9-204ENST00000554258 TRAV21A0A0B4J279 112 aa11.66□□□□□ -0.54
NEK9-204ENST00000554258 GCGP01275 180 aa11.66□□□□□ -0.54
NEK9-204ENST00000554258 DAD1P61803 113 aa11.66□□□□□ -0.54
NEK9-204ENST00000554258 CENPWQ5EE01 88 aa11.66□□□□□ -0.54
NEK9-204ENST00000554258 EIF4E3Q8N5X7 224 aaKnown RBP11.66□□□□□ -0.54
NEK9-204ENST00000554258 ZC2HC1AQ96GY0 325 aa11.66□□□□□ -0.54
NEK9-204ENST00000554258 PYGO2Q9BRQ0 406 aa11.66□□□□□ -0.54
NEK9-204ENST00000554258 IGHV3OR16-12A0A075B7B8 117 aa11.65□□□□□ -0.54
NEK9-204ENST00000554258 PLA2G1BP04054 148 aaKnown RBP11.65□□□□□ -0.54
NEK9-204ENST00000554258 PFN1P07737 140 aaKnown RBP11.65□□□□□ -0.54
NEK9-204ENST00000554258 ERVFC1-1P60608 527 aa11.65□□□□□ -0.54
NEK9-204ENST00000554258 ZNF674Q2M3X9 581 aa11.65□□□□□ -0.54
NEK9-204ENST00000554258 TDRG1Q3Y452 100 aa11.65□□□□□ -0.54
NEK9-204ENST00000554258 LINC01587Q99440 93 aa11.65□□□□□ -0.54
NEK9-204ENST00000554258 FABP5P3A8MUU1 101 aa11.64□□□□□ -0.55
NEK9-204ENST00000554258 GNG4P50150 75 aa11.64□□□□□ -0.55
NEK9-204ENST00000554258 FAM74A3Q4VXF1 159 aa11.64□□□□□ -0.55
NEK9-204ENST00000554258 UQCC3Q6UW78 93 aa11.64□□□□□ -0.55
NEK9-204ENST00000554258 TMEM208Q9BTX3 173 aa11.64□□□□□ -0.55
NEK9-204ENST00000554258 C11orf21Q9P2W6 132 aa11.64□□□□□ -0.55
NEK9-204ENST00000554258 LY96Q9Y6Y9 160 aa11.64□□□□□ -0.55
NEK9-204ENST00000554258 IGHV1OR15-1A0A075B7D0 117 aa11.63□□□□□ -0.55
NEK9-204ENST00000554258 A0A1W2PPQ1 181 aa11.63□□□□□ -0.55
NEK9-204ENST00000554258 ANXA2RQ3ZCQ2 193 aa11.63□□□□□ -0.55
NEK9-204ENST00000554258 OCC1Q8TAD7 63 aa11.63□□□□□ -0.55
NEK9-204ENST00000554258 PKHD1L1Q86WI1 4243 aa11.62□□□□□ -0.55
NEK9-204ENST00000554258 ZNF705GA8MUZ8 300 aaPredicted RBP11.62□□□□□ -0.55
NEK9-204ENST00000554258 PRM2P04554 102 aa11.62□□□□□ -0.55
NEK9-204ENST00000554258 AZU1P20160 251 aa11.62□□□□□ -0.55
NEK9-204ENST00000554258 RRN3P1Q2M238 152 aa11.62□□□□□ -0.55
NEK9-204ENST00000554258 FAM162BQ5T6X4 162 aa11.62□□□□□ -0.55
NEK9-204ENST00000554258 NHLRC2Q8NBF2 726 aa11.62□□□□□ -0.55
NEK9-204ENST00000554258 SMIM7Q9BQ49 75 aa11.62□□□□□ -0.55
NEK9-204ENST00000554258 PGPEP1LA6NFU8 196 aa11.61□□□□□ -0.55
NEK9-204ENST00000554258 ZNF727A8MUV8 499 aa11.61□□□□□ -0.55
NEK9-204ENST00000554258 SH2D1AO60880 128 aa11.61□□□□□ -0.55
NEK9-204ENST00000554258 GCSHP23434 173 aa11.61□□□□□ -0.55
NEK9-204ENST00000554258 LINC00315P59091 139 aa11.61□□□□□ -0.55
NEK9-204ENST00000554258 ZNF493Q6ZR52 646 aa11.61□□□□□ -0.55
NEK9-204ENST00000554258 TP53TG3Q9ULZ0 132 aa11.61□□□□□ -0.55
NEK9-204ENST00000554258 PLAC8L1A1L4L8 177 aa11.6□□□□□ -0.55
NEK9-204ENST00000554258 C19orf71A6NCJ1 209 aa11.6□□□□□ -0.55
NEK9-204ENST00000554258 CEBPGP53567 150 aa11.6□□□□□ -0.55
NEK9-204ENST00000554258 Q6ZRN7 208 aaPredicted RBP11.6□□□□□ -0.55
NEK9-204ENST00000554258 COMMD7Q86VX2 200 aa11.6□□□□□ -0.55
NEK9-204ENST00000554258 RNASE8Q8TDE3 154 aaKnown RBP11.6□□□□□ -0.55
NEK9-204ENST00000554258 KCNS1Q96KK3 526 aa11.6□□□□□ -0.55
NEK9-204ENST00000554258 BIN3Q9NQY0 253 aa11.6□□□□□ -0.55
NEK9-204ENST00000554258 IGKV3D-20A0A0C4DH25 116 aa11.59□□□□□ -0.55
NEK9-204ENST00000554258 K7EN84 100 aa11.59□□□□□ -0.55
NEK9-204ENST00000554258 OXTP01178 125 aa11.59□□□□□ -0.55
NEK9-204ENST00000554258 FAM159AQ6UWV7 190 aa11.59□□□□□ -0.55
NEK9-204ENST00000554258 TMEM263Q8WUH6 116 aaKnown RBP11.59□□□□□ -0.55
NEK9-204ENST00000554258 KRBOX1C9JBD0 128 aa11.58□□□□□ -0.56
NEK9-204ENST00000554258 F5H768 121 aa11.58□□□□□ -0.56
NEK9-204ENST00000554258 SFTA3P0C7M3 94 aa11.58□□□□□ -0.56
NEK9-204ENST00000554258 TMEM241Q24JQ0 296 aa11.58□□□□□ -0.56
NEK9-204ENST00000554258 LINC01559Q495D7 138 aa11.58□□□□□ -0.56
NEK9-204ENST00000554258 MUC21Q5SSG8 566 aa11.58□□□□□ -0.56
NEK9-204ENST00000554258 DNLZQ5SXM8 178 aa11.58□□□□□ -0.56
NEK9-204ENST00000554258 IBA57Q5T440 356 aaKnown RBP11.58□□□□□ -0.56
NEK9-204ENST00000554258 LINC01551Q86U37 167 aa11.58□□□□□ -0.56
NEK9-204ENST00000554258 C11orf72Q8NBR9 251 aa11.58□□□□□ -0.56
NEK9-204ENST00000554258 C16orf74Q96GX8 76 aa11.58□□□□□ -0.56
NEK9-204ENST00000554258 TMEM218A2RU14 115 aa11.57□□□□□ -0.56
NEK9-204ENST00000554258 GNRH2O43555 120 aa11.57□□□□□ -0.56
NEK9-204ENST00000554258 MGST1P10620 155 aaKnown RBP11.57□□□□□ -0.56
NEK9-204ENST00000554258 OR5I1Q13606 314 aa11.57□□□□□ -0.56
NEK9-204ENST00000554258 TMEM70Q9BUB7 260 aa11.57□□□□□ -0.56
NEK9-204ENST00000554258 KRTAP9-2Q9BYQ4 174 aa11.57□□□□□ -0.56
NEK9-204ENST00000554258 SDF2L1Q9HCN8 221 aa11.57□□□□□ -0.56
NEK9-204ENST00000554258 NAT8Q9UHE5 227 aa11.57□□□□□ -0.56
NEK9-204ENST00000554258 TRGV11A0A075B6L2 103 aa11.56□□□□□ -0.56
NEK9-204ENST00000554258 IGHV3-16A0A0C4DH30 117 aa11.56□□□□□ -0.56
NEK9-204ENST00000554258 CBY3A6NI87 242 aa11.56□□□□□ -0.56
NEK9-204ENST00000554258 TYMSP04818 313 aa11.56□□□□□ -0.56
NEK9-204ENST00000554258 CXCL1P09341 107 aa11.56□□□□□ -0.56
NEK9-204ENST00000554258 HTN1P15515 57 aa11.56□□□□□ -0.56
NEK9-204ENST00000554258 PRR27Q6MZM9 219 aa11.56□□□□□ -0.56
NEK9-204ENST00000554258 FAM231DQ6ZW35 169 aa11.56□□□□□ -0.56
NEK9-204ENST00000554258 ORM1P02763 201 aa11.55□□□□□ -0.56
NEK9-204ENST00000554258 DNAH10OSP0CZ25 163 aa11.55□□□□□ -0.56
NEK9-204ENST00000554258 TCL1AP56279 114 aa11.55□□□□□ -0.56
NEK9-204ENST00000554258 RPL23P62829 140 aaKnown RBP11.55□□□□□ -0.56
NEK9-204ENST00000554258 DAZ2Q13117 558 aaKnown RBP11.55□□□□□ -0.56
NEK9-204ENST00000554258 NUDT10Q8NFP7 164 aa11.55□□□□□ -0.56
NEK9-204ENST00000554258 NUDT11Q96G61 164 aa11.55□□□□□ -0.56
NEK9-204ENST00000554258 NAGKQ9UJ70 344 aa11.55□□□□□ -0.56
NEK9-204ENST00000554258 B4DEV8 164 aa11.54□□□□□ -0.56
NEK9-204ENST00000554258 GSN-AS1Q9NRJ2 163 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms