RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 K7EMI3 77 aa11□□□□□ -0.65
ACTN1-211ENST00000553882 A0A0G2JLM5 398 aa11□□□□□ -0.65
ACTN1-211ENST00000553882 MSMBP08118 114 aa11□□□□□ -0.65
ACTN1-211ENST00000553882 DEFB104AQ8WTQ1 72 aa11□□□□□ -0.65
ACTN1-211ENST00000553882 RASL10AQ92737 203 aa11□□□□□ -0.65
ACTN1-211ENST00000553882 FXYD2P54710 66 aa10.99□□□□□ -0.65
ACTN1-211ENST00000553882 MRAP2Q96G30 205 aa10.99□□□□□ -0.65
ACTN1-211ENST00000553882 MXRA5Q9NR99 2828 aa10.99□□□□□ -0.65
ACTN1-211ENST00000553882 MUC4Q99102 2169 aa10.99□□□□□ -0.65
ACTN1-211ENST00000553882 TRBV25-1A0A075B6N4 114 aa10.99□□□□□ -0.65
ACTN1-211ENST00000553882 SUMO2P61956 95 aaKnown RBP10.99□□□□□ -0.65
ACTN1-211ENST00000553882 CHAC1Q9BUX1 264 aa10.99□□□□□ -0.65
ACTN1-211ENST00000553882 DAZ1Q9NQZ3 744 aaKnown RBP10.99□□□□□ -0.65
ACTN1-211ENST00000553882 ANKRD17O75179 2603 aaKnown RBP10.98□□□□□ -0.65
ACTN1-211ENST00000553882 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.98□□□□□ -0.65
ACTN1-211ENST00000553882 DPH3P1Q9H4G8 78 aa10.98□□□□□ -0.65
ACTN1-211ENST00000553882 SMPXQ9UHP9 88 aa10.98□□□□□ -0.65
ACTN1-211ENST00000553882 LRRK2Q5S007 2527 aa10.97□□□□□ -0.65
ACTN1-211ENST00000553882 A0A087WX48 190 aa10.97□□□□□ -0.65
ACTN1-211ENST00000553882 K7ERJ3 54 aa10.97□□□□□ -0.65
ACTN1-211ENST00000553882 RNASE3P12724 160 aaKnown RBP10.97□□□□□ -0.65
ACTN1-211ENST00000553882 OCIAD2Q56VL3 154 aa10.97□□□□□ -0.65
ACTN1-211ENST00000553882 C10orf99Q6UWK7 81 aa10.97□□□□□ -0.65
ACTN1-211ENST00000553882 NEGR1Q7Z3B1 354 aa10.97□□□□□ -0.65
ACTN1-211ENST00000553882 AGRNO00468 2067 aa10.97□□□□□ -0.65
ACTN1-211ENST00000553882 FBN2P35556 2912 aa10.97□□□□□ -0.65
ACTN1-211ENST00000553882 MAPKAPK5-AS1Q8N8E1 139 aa10.97□□□□□ -0.65
ACTN1-211ENST00000553882 H3BUA1 57 aa10.96□□□□□ -0.65
ACTN1-211ENST00000553882 IGLV1-40P01703 118 aa10.96□□□□□ -0.65
ACTN1-211ENST00000553882 SCGB3A1Q96QR1 104 aa10.96□□□□□ -0.65
ACTN1-211ENST00000553882 FAM19A4Q96LR4 140 aa10.96□□□□□ -0.66
ACTN1-211ENST00000553882 CDKN1BP46527 198 aa10.95□□□□□ -0.66
ACTN1-211ENST00000553882 UFSP1Q6NVU6 142 aa10.95□□□□□ -0.66
ACTN1-211ENST00000553882 GTF2H5Q6ZYL4 71 aa10.95□□□□□ -0.66
ACTN1-211ENST00000553882 JPT2Q9H910 190 aa10.95□□□□□ -0.66
ACTN1-211ENST00000553882 IGKV3-20P01619 116 aa10.94□□□□□ -0.66
ACTN1-211ENST00000553882 IGHV4-59P01825 116 aa10.94□□□□□ -0.66
ACTN1-211ENST00000553882 ORMDL2Q53FV1 153 aa10.94□□□□□ -0.66
ACTN1-211ENST00000553882 MAPK1IP1LQ8NDC0 245 aa10.94□□□□□ -0.66
ACTN1-211ENST00000553882 NHP2Q9NX24 153 aaKnown RBP10.94□□□□□ -0.66
ACTN1-211ENST00000553882 HIGD1BQ9P298 99 aa10.94□□□□□ -0.66
ACTN1-211ENST00000553882 A0A1W2PPM0 123 aa10.93□□□□□ -0.66
ACTN1-211ENST00000553882 RNF223E7ERA6 249 aa10.93□□□□□ -0.66
ACTN1-211ENST00000553882 K7EP34 96 aa10.93□□□□□ -0.66
ACTN1-211ENST00000553882 SMIM13P0DJ93 91 aa10.93□□□□□ -0.66
ACTN1-211ENST00000553882 PLNP26678 52 aa10.93□□□□□ -0.66
ACTN1-211ENST00000553882 TRAV12-3A0A0B4J271 114 aa10.93□□□□□ -0.66
ACTN1-211ENST00000553882 F8VRH5 84 aa10.93□□□□□ -0.66
ACTN1-211ENST00000553882 PSMG4Q5JS54 123 aa10.93□□□□□ -0.66
ACTN1-211ENST00000553882 C2orf66Q6UXQ4 117 aa10.93□□□□□ -0.66
ACTN1-211ENST00000553882 TOMM6Q96B49 74 aa10.93□□□□□ -0.66
ACTN1-211ENST00000553882 VPS25Q9BRG1 176 aa10.93□□□□□ -0.66
ACTN1-211ENST00000553882 CSTL1Q9H114 145 aa10.93□□□□□ -0.66
ACTN1-211ENST00000553882 SPCS1Q9Y6A9 102 aa10.93□□□□□ -0.66
ACTN1-211ENST00000553882 ABCA12Q86UK0 2595 aa10.93□□□□□ -0.66
ACTN1-211ENST00000553882 PTPN13Q12923 2485 aa10.92□□□□□ -0.66
ACTN1-211ENST00000553882 A0A087WWL8 130 aa10.92□□□□□ -0.66
ACTN1-211ENST00000553882 B4DSR2 109 aa10.92□□□□□ -0.66
ACTN1-211ENST00000553882 H7C1H1 209 aa10.92□□□□□ -0.66
ACTN1-211ENST00000553882 SAP30O75446 220 aa10.92□□□□□ -0.66
ACTN1-211ENST00000553882 BRI3O95415 125 aa10.92□□□□□ -0.66
ACTN1-211ENST00000553882 ZNF688P0C7X2 276 aa10.92□□□□□ -0.66
ACTN1-211ENST00000553882 CFHR3Q02985 330 aa10.92□□□□□ -0.66
ACTN1-211ENST00000553882 FAM159AQ6UWV7 190 aa10.92□□□□□ -0.66
ACTN1-211ENST00000553882 DCANP1Q8TF63 244 aa10.92□□□□□ -0.66
ACTN1-211ENST00000553882 C20orf78Q9BR46 151 aa10.92□□□□□ -0.66
ACTN1-211ENST00000553882 MYO9AB2RTY4 2548 aa10.92□□□□□ -0.66
ACTN1-211ENST00000553882 APRG1Q8IVJ8 170 aa10.92□□□□□ -0.66
ACTN1-211ENST00000553882 CD7P09564 240 aa10.91□□□□□ -0.66
ACTN1-211ENST00000553882 DEFB112Q30KQ8 113 aa10.91□□□□□ -0.66
ACTN1-211ENST00000553882 SAMD5Q5TGI4 173 aa10.91□□□□□ -0.66
ACTN1-211ENST00000553882 CEND1Q8N111 149 aa10.91□□□□□ -0.66
ACTN1-211ENST00000553882 TRAV12-2A0A075B6T6 113 aa10.91□□□□□ -0.66
ACTN1-211ENST00000553882 KLLNB2CW77 178 aa10.91□□□□□ -0.66
ACTN1-211ENST00000553882 ZNF462Q96JM2 2506 aa10.9□□□□□ -0.66
ACTN1-211ENST00000553882 NEXN-AS1Q8NBZ9 246 aa10.9□□□□□ -0.66
ACTN1-211ENST00000553882 BAALCQ8WXS3 180 aa10.9□□□□□ -0.66
ACTN1-211ENST00000553882 F5H697 171 aa10.9□□□□□ -0.66
ACTN1-211ENST00000553882 FABP2P12104 132 aa10.9□□□□□ -0.66
ACTN1-211ENST00000553882 PSMB8P28062 276 aa10.9□□□□□ -0.66
ACTN1-211ENST00000553882 TRAV12-1A0A0B4J245 112 aa10.89□□□□□ -0.67
ACTN1-211ENST00000553882 HLA-DRB4P13762 266 aa10.89□□□□□ -0.67
ACTN1-211ENST00000553882 ID1P41134 155 aa10.89□□□□□ -0.67
ACTN1-211ENST00000553882 FAM74A4Q5TZK3 123 aa10.89□□□□□ -0.67
ACTN1-211ENST00000553882 HLA-DRB4X5D2U9 266 aa10.89□□□□□ -0.67
ACTN1-211ENST00000553882 TLN2Q9Y4G6 2542 aa10.89□□□□□ -0.67
ACTN1-211ENST00000553882 DUSP14O95147 198 aaKnown RBP10.89□□□□□ -0.67
ACTN1-211ENST00000553882 MED14OSP0DP75 135 aa10.89□□□□□ -0.67
ACTN1-211ENST00000553882 EMP1P54849 157 aa10.89□□□□□ -0.67
ACTN1-211ENST00000553882 DUX5Q96PT3 197 aa10.89□□□□□ -0.67
ACTN1-211ENST00000553882 HIST1H4GQ99525 98 aa10.89□□□□□ -0.67
ACTN1-211ENST00000553882 TEX15Q9BXT5 2789 aa10.89□□□□□ -0.67
ACTN1-211ENST00000553882 PRSS29PA6NIE9 313 aa10.88□□□□□ -0.67
ACTN1-211ENST00000553882 OR11H12B2RN74 326 aa10.88□□□□□ -0.67
ACTN1-211ENST00000553882 LINC00315P59091 139 aa10.88□□□□□ -0.67
ACTN1-211ENST00000553882 Q5PR19 223 aa10.88□□□□□ -0.67
ACTN1-211ENST00000553882 OR11H1Q8NG94 326 aa10.88□□□□□ -0.67
ACTN1-211ENST00000553882 OR11H2Q8NH07 326 aa10.88□□□□□ -0.67
ACTN1-211ENST00000553882 KIF25-AS1Q9Y6Z4 181 aa10.88□□□□□ -0.67
ACTN1-211ENST00000553882 SLC25A16P16260 332 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms