RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 FABP5P3A8MUU1 101 aa5.89□□□□□ -1.47
PSEN1-209ENST00000553855 NUDT3O95989 172 aa5.89□□□□□ -1.47
PSEN1-209ENST00000553855 SULT1A2P50226 295 aa5.89□□□□□ -1.47
PSEN1-209ENST00000553855 SLAQ13239 276 aa5.89□□□□□ -1.47
PSEN1-209ENST00000553855 Q6ZTI0 123 aa5.89□□□□□ -1.47
PSEN1-209ENST00000553855 TXNDC17Q9BRA2 123 aa5.89□□□□□ -1.47
PSEN1-209ENST00000553855 GNG13Q9P2W3 67 aa5.89□□□□□ -1.47
PSEN1-209ENST00000553855 TP53TG3Q9ULZ0 132 aa5.89□□□□□ -1.47
PSEN1-209ENST00000553855 KLF12Q9Y4X4 402 aa5.89□□□□□ -1.47
PSEN1-209ENST00000553855 RYR2Q92736 4967 aa5.89□□□□□ -1.47
PSEN1-209ENST00000553855 KRTAP4-8A0A0G2JLE6 195 aa5.88□□□□□ -1.47
PSEN1-209ENST00000553855 SPINK4O60575 86 aa5.88□□□□□ -1.47
PSEN1-209ENST00000553855 TAGLN2P37802 199 aaKnown RBP5.88□□□□□ -1.47
PSEN1-209ENST00000553855 TDRG1Q3Y452 100 aa5.88□□□□□ -1.47
PSEN1-209ENST00000553855 Q86TA4 180 aa5.88□□□□□ -1.47
PSEN1-209ENST00000553855 C9orf62Q8N4C0 152 aa5.88□□□□□ -1.47
PSEN1-209ENST00000553855 LINC00612Q8N6U2 182 aa5.88□□□□□ -1.47
PSEN1-209ENST00000553855 C11orf72Q8NBR9 251 aa5.88□□□□□ -1.47
PSEN1-209ENST00000553855 LINC00479Q96M42 142 aa5.88□□□□□ -1.47
PSEN1-209ENST00000553855 C8orf49Q96NF6 230 aa5.88□□□□□ -1.47
PSEN1-209ENST00000553855 MRPL16Q9NX20 251 aaKnown RBP5.88□□□□□ -1.47
PSEN1-209ENST00000553855 PLECQ15149 4684 aaKnown RBP5.87□□□□□ -1.47
PSEN1-209ENST00000553855 TRAV26-1A0A087WT03 109 aa5.87□□□□□ -1.47
PSEN1-209ENST00000553855 TRAV1-1A0A0B4J248 108 aa5.87□□□□□ -1.47
PSEN1-209ENST00000553855 TRGV4A0A0C4DH28 118 aa5.87□□□□□ -1.47
PSEN1-209ENST00000553855 M0R2P5 195 aa5.87□□□□□ -1.47
PSEN1-209ENST00000553855 GNRH2O43555 120 aa5.87□□□□□ -1.47
PSEN1-209ENST00000553855 IGHV3-53P01767 116 aa5.87□□□□□ -1.47
PSEN1-209ENST00000553855 ORM1P02763 201 aa5.87□□□□□ -1.47
PSEN1-209ENST00000553855 TYMSP04818 313 aa5.87□□□□□ -1.47
PSEN1-209ENST00000553855 ASIPP42127 132 aa5.87□□□□□ -1.47
PSEN1-209ENST00000553855 CCL18P55774 89 aa5.87□□□□□ -1.47
PSEN1-209ENST00000553855 FAM162BQ5T6X4 162 aa5.87□□□□□ -1.47
PSEN1-209ENST00000553855 POM121L12Q8N7R1 296 aa5.87□□□□□ -1.47
PSEN1-209ENST00000553855 TVP23CQ96ET8 276 aa5.87□□□□□ -1.47
PSEN1-209ENST00000553855 C18orf15Q96N68 181 aa5.87□□□□□ -1.47
PSEN1-209ENST00000553855 MLST8Q9BVC4 326 aa5.87□□□□□ -1.47
PSEN1-209ENST00000553855 MDFICQ9P1T7 246 aa5.87□□□□□ -1.47
PSEN1-209ENST00000553855 IGHV3-16A0A0C4DH30 117 aa5.86□□□□□ -1.47
PSEN1-209ENST00000553855 A0A0J9YY99 117 aa5.86□□□□□ -1.47
PSEN1-209ENST00000553855 TRBV6-1A0A0K0K1D8 114 aa5.86□□□□□ -1.47
PSEN1-209ENST00000553855 B4DEV8 164 aa5.86□□□□□ -1.47
PSEN1-209ENST00000553855 H3BNG1 76 aa5.86□□□□□ -1.47
PSEN1-209ENST00000553855 PDE6DO43924 150 aa5.86□□□□□ -1.47
PSEN1-209ENST00000553855 IGLV2-11P01706 119 aa5.86□□□□□ -1.47
PSEN1-209ENST00000553855 RNF212Q495C1 297 aa5.86□□□□□ -1.47
PSEN1-209ENST00000553855 Q6ZQT7 251 aa5.86□□□□□ -1.47
PSEN1-209ENST00000553855 BAGE2Q86Y30 109 aa5.86□□□□□ -1.47
PSEN1-209ENST00000553855 OR4C5Q8NGB2 326 aa5.86□□□□□ -1.47
PSEN1-209ENST00000553855 PCNPQ8WW12 178 aaKnown RBP5.86□□□□□ -1.47
PSEN1-209ENST00000553855 PRO0255Q9UI72 69 aa5.86□□□□□ -1.47
PSEN1-209ENST00000553855 C9JCJ5 164 aa5.85□□□□□ -1.47
PSEN1-209ENST00000553855 CIDEAO60543 219 aa5.85□□□□□ -1.47
PSEN1-209ENST00000553855 LTAP01374 205 aa5.85□□□□□ -1.47
PSEN1-209ENST00000553855 ZNF80P51504 273 aaPredicted RBP5.85□□□□□ -1.47
PSEN1-209ENST00000553855 MEF2BQ02080 365 aaPredicted RBP5.85□□□□□ -1.47
PSEN1-209ENST00000553855 ZNF876PQ49A33 203 aa5.85□□□□□ -1.47
PSEN1-209ENST00000553855 ALKAL2Q6UX46 152 aa5.85□□□□□ -1.47
PSEN1-209ENST00000553855 RASL10AQ92737 203 aa5.85□□□□□ -1.47
PSEN1-209ENST00000553855 DAZAP1Q96EP5 407 aaKnown RBP5.85□□□□□ -1.47
PSEN1-209ENST00000553855 BIN3Q9NQY0 253 aa5.85□□□□□ -1.47
PSEN1-209ENST00000553855 VAX2Q9UIW0 290 aa5.85□□□□□ -1.47
PSEN1-209ENST00000553855 ICOSQ9Y6W8 199 aa5.85□□□□□ -1.47
PSEN1-209ENST00000553855 TENM2Q9NT68 2774 aa5.85□□□□□ -1.47
PSEN1-209ENST00000553855 TRAV4A0A0B4J268 109 aa5.84□□□□□ -1.47
PSEN1-209ENST00000553855 M0R036 132 aa5.84□□□□□ -1.47
PSEN1-209ENST00000553855 SH2D1AO60880 128 aa5.84□□□□□ -1.47
PSEN1-209ENST00000553855 BCL2P10415 239 aa5.84□□□□□ -1.47
PSEN1-209ENST00000553855 NKX2-5P52952 324 aaPredicted RBP5.84□□□□□ -1.47
PSEN1-209ENST00000553855 CCL20P78556 96 aa5.84□□□□□ -1.47
PSEN1-209ENST00000553855 ZC2HC1AQ96GY0 325 aa5.84□□□□□ -1.47
PSEN1-209ENST00000553855 MED9Q9NWA0 146 aa5.84□□□□□ -1.47
PSEN1-209ENST00000553855 HHLA3Q9XRX5 114 aa5.84□□□□□ -1.47
PSEN1-209ENST00000553855 CSMD3Q7Z407 3707 aa5.84□□□□□ -1.48
PSEN1-209ENST00000553855 DYNC2H1Q8NCM8 4307 aaKnown RBP5.83□□□□□ -1.48
PSEN1-209ENST00000553855 MGST1P10620 155 aaKnown RBP5.83□□□□□ -1.48
PSEN1-209ENST00000553855 RPL35P42766 123 aaKnown RBP5.83□□□□□ -1.48
PSEN1-209ENST00000553855 GNG4P50150 75 aa5.83□□□□□ -1.48
PSEN1-209ENST00000553855 MRPL23Q16540 153 aaKnown RBP5.83□□□□□ -1.48
PSEN1-209ENST00000553855 SOHLH1Q5JUK2 328 aa5.83□□□□□ -1.48
PSEN1-209ENST00000553855 PRR27Q6MZM9 219 aa5.83□□□□□ -1.48
PSEN1-209ENST00000553855 COX8CQ7Z4L0 72 aa5.83□□□□□ -1.48
PSEN1-209ENST00000553855 NHLRC2Q8NBF2 726 aa5.83□□□□□ -1.48
PSEN1-209ENST00000553855 C11orf52Q96A22 123 aa5.83□□□□□ -1.48
PSEN1-209ENST00000553855 PHLDA3Q9Y5J5 127 aa5.83□□□□□ -1.48
PSEN1-209ENST00000553855 SACSQ9NZJ4 4579 aa5.82□□□□□ -1.48
PSEN1-209ENST00000553855 TMSB15BA0A087X1C1 80 aa5.82□□□□□ -1.48
PSEN1-209ENST00000553855 XKRY2A2RUG3 117 aa5.82□□□□□ -1.48
PSEN1-209ENST00000553855 GRIFINA4D1Z8 144 aa5.82□□□□□ -1.48
PSEN1-209ENST00000553855 A8MWV9 139 aa5.82□□□□□ -1.48
PSEN1-209ENST00000553855 SFTA3P0C7M3 94 aa5.82□□□□□ -1.48
PSEN1-209ENST00000553855 SRIP30626 198 aa5.82□□□□□ -1.48
PSEN1-209ENST00000553855 ZNF674Q2M3X9 581 aa5.82□□□□□ -1.48
PSEN1-209ENST00000553855 LCE4AQ5TA78 99 aa5.82□□□□□ -1.48
PSEN1-209ENST00000553855 SH2D6Q7Z4S9 175 aa5.82□□□□□ -1.48
PSEN1-209ENST00000553855 PTH2Q96A98 100 aa5.82□□□□□ -1.48
PSEN1-209ENST00000553855 SMIM12Q96EX1 92 aa5.82□□□□□ -1.48
PSEN1-209ENST00000553855 ZNF479Q96JC4 524 aa5.82□□□□□ -1.48
PSEN1-209ENST00000553855 PRADC1Q9BSG0 188 aa5.82□□□□□ -1.48
PSEN1-209ENST00000553855 IL36BQ9NZH7 164 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms