RNA–Protein interactions for RNA: ENST00000553745.5

ABCD4-219, Transcript of ATP binding cassette subfamily D member 4, human

TSL 2

Gene ABCD4, Length 1,770 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCD4-219	ENST00000553745	ZNF705A	Q6ZN79	300 aa	Predicted RBP	10.48	□□□□□ -0.73
ABCD4-219	ENST00000553745	PRELID3A	Q96N28	172 aa		10.48	□□□□□ -0.73
ABCD4-219	ENST00000553745	TRAV9-2	A0A087WT02	112 aa		10.47	□□□□□ -0.73
ABCD4-219	ENST00000553745		A0A1B0GV90	55 aa		10.47	□□□□□ -0.73
ABCD4-219	ENST00000553745	SYS1-DBNDD2	H3BUS1	97 aa		10.47	□□□□□ -0.73
ABCD4-219	ENST00000553745	SST	P61278	116 aa		10.47	□□□□□ -0.73
ABCD4-219	ENST00000553745	TWIST1	Q15672	202 aa		10.47	□□□□□ -0.73
ABCD4-219	ENST00000553745	PSMG4	Q5JS54	123 aa		10.47	□□□□□ -0.73
ABCD4-219	ENST00000553745	ORMDL3	Q8N138	153 aa		10.47	□□□□□ -0.73
ABCD4-219	ENST00000553745	RNF185	Q96GF1	192 aa		10.47	□□□□□ -0.73
ABCD4-219	ENST00000553745	SPAG8	Q99932	426 aa	Predicted RBP	10.47	□□□□□ -0.73
ABCD4-219	ENST00000553745	AP5S1	Q9NUS5	200 aa		10.47	□□□□□ -0.73
ABCD4-219	ENST00000553745	MSRB1	Q9NZV6	116 aa		10.47	□□□□□ -0.73
ABCD4-219	ENST00000553745	STAB1	Q9NY15	2570 aa		10.47	□□□□□ -0.73
ABCD4-219	ENST00000553745	TRAV2	A0A0B4J234	112 aa		10.47	□□□□□ -0.73
ABCD4-219	ENST00000553745	TRAV25	A0A0B4J276	109 aa		10.47	□□□□□ -0.73
ABCD4-219	ENST00000553745	SNRPD3	P62318	126 aa	Known RBP	10.47	□□□□□ -0.73
ABCD4-219	ENST00000553745	MAJIN	Q3KP22	176 aa		10.47	□□□□□ -0.73
ABCD4-219	ENST00000553745	ATOH7	Q8N100	152 aa		10.47	□□□□□ -0.73
ABCD4-219	ENST00000553745	PRSS3P2	Q8NHM4	247 aa		10.47	□□□□□ -0.73
ABCD4-219	ENST00000553745	LINC00477	Q96M19	166 aa		10.47	□□□□□ -0.73
ABCD4-219	ENST00000553745		F6UB75	175 aa		10.46	□□□□□ -0.74
ABCD4-219	ENST00000553745	IFI27	P40305	119 aa	Predicted RBP	10.46	□□□□□ -0.74
ABCD4-219	ENST00000553745	FA2H	Q7L5A8	372 aa		10.46	□□□□□ -0.74
ABCD4-219	ENST00000553745	ZNF256	Q9Y2P7	627 aa	Predicted RBP	10.46	□□□□□ -0.74
ABCD4-219	ENST00000553745		A0A096LNJ9	63 aa		10.45	□□□□□ -0.74
ABCD4-219	ENST00000553745	C20orf202	A1L168	122 aa		10.45	□□□□□ -0.74
ABCD4-219	ENST00000553745	PRR9	Q5T870	116 aa		10.45	□□□□□ -0.74
ABCD4-219	ENST00000553745	PET117	Q6UWS5	81 aa		10.45	□□□□□ -0.74
ABCD4-219	ENST00000553745		Q6ZQT7	251 aa		10.45	□□□□□ -0.74
ABCD4-219	ENST00000553745	HSPB8	Q9UJY1	196 aa		10.45	□□□□□ -0.74
ABCD4-219	ENST00000553745	COL6A5	A8TX70	2615 aa		10.45	□□□□□ -0.74
ABCD4-219	ENST00000553745	OR4C46	A6NHA9	309 aa		10.44	□□□□□ -0.74
ABCD4-219	ENST00000553745	ZFAND2A	Q8N6M9	145 aa		10.44	□□□□□ -0.74
ABCD4-219	ENST00000553745	OR2K2	Q8NGT1	345 aa		10.44	□□□□□ -0.74
ABCD4-219	ENST00000553745	FAM19A4	Q96LR4	140 aa		10.44	□□□□□ -0.74
ABCD4-219	ENST00000553745	UQCR10	Q9UDW1	63 aa		10.44	□□□□□ -0.74
ABCD4-219	ENST00000553745	SORL1	Q92673	2214 aa		10.44	□□□□□ -0.74
ABCD4-219	ENST00000553745	SMKR1	H3BMG3	65 aa		10.44	□□□□□ -0.74
ABCD4-219	ENST00000553745	SNAI2	O43623	268 aa		10.44	□□□□□ -0.74
ABCD4-219	ENST00000553745	NPY	P01303	97 aa		10.44	□□□□□ -0.74
ABCD4-219	ENST00000553745	IGLL1	P15814	213 aa		10.44	□□□□□ -0.74
ABCD4-219	ENST00000553745	CKS2	P33552	79 aa		10.44	□□□□□ -0.74
ABCD4-219	ENST00000553745	C9orf66	Q5T8R8	295 aa		10.44	□□□□□ -0.74
ABCD4-219	ENST00000553745	OR8A1	Q8NGG7	326 aa		10.44	□□□□□ -0.74
ABCD4-219	ENST00000553745	OR10AG1	Q8NH19	301 aa		10.44	□□□□□ -0.74
ABCD4-219	ENST00000553745	MAP6D1	Q9H9H5	199 aa		10.44	□□□□□ -0.74
ABCD4-219	ENST00000553745	IGHV4-4	A0A075B6R2	117 aa		10.43	□□□□□ -0.74
ABCD4-219	ENST00000553745	PPBP	P02775	128 aa		10.43	□□□□□ -0.74
ABCD4-219	ENST00000553745	DEFB131A	P59861	70 aa		10.43	□□□□□ -0.74
ABCD4-219	ENST00000553745	APRG1	Q8IVJ8	170 aa		10.43	□□□□□ -0.74
ABCD4-219	ENST00000553745	MDFI	Q99750	246 aa		10.43	□□□□□ -0.74
ABCD4-219	ENST00000553745	MAP1LC3C	Q9BXW4	147 aa		10.43	□□□□□ -0.74
ABCD4-219	ENST00000553745	AGRN	O00468	2067 aa		10.43	□□□□□ -0.74
ABCD4-219	ENST00000553745	LOC389332	A0A1B0GUA5	103 aa		10.42	□□□□□ -0.74
ABCD4-219	ENST00000553745	INSL3	P51460	131 aa		10.42	□□□□□ -0.74
ABCD4-219	ENST00000553745	ZNF124	Q15973	351 aa		10.42	□□□□□ -0.74
ABCD4-219	ENST00000553745	ODF3L2	Q3SX64	289 aa		10.42	□□□□□ -0.74
ABCD4-219	ENST00000553745	LINC01545	Q5VT33	79 aa		10.42	□□□□□ -0.74
ABCD4-219	ENST00000553745	WFDC9	Q8NEX5	89 aa		10.42	□□□□□ -0.74
ABCD4-219	ENST00000553745	OR10J6P	Q8NGY7	276 aa		10.42	□□□□□ -0.74
ABCD4-219	ENST00000553745	ZMAT5	Q9UDW3	170 aa	Known RBP	10.42	□□□□□ -0.74
ABCD4-219	ENST00000553745	LINC01546	A6NGU7	62 aa		10.42	□□□□□ -0.74
ABCD4-219	ENST00000553745	NCR2	O95944	276 aa		10.42	□□□□□ -0.74
ABCD4-219	ENST00000553745	NUTF2	P61970	127 aa	Known RBP	10.42	□□□□□ -0.74
ABCD4-219	ENST00000553745	LAMTOR2	Q9Y2Q5	125 aa		10.42	□□□□□ -0.74
ABCD4-219	ENST00000553745	TRBV7-9	A0A0J9YWB2	115 aa		10.41	□□□□□ -0.74
ABCD4-219	ENST00000553745		A0A0J9YX75	114 aa		10.41	□□□□□ -0.74
ABCD4-219	ENST00000553745	GAS8-AS1	O95177	125 aa		10.41	□□□□□ -0.74
ABCD4-219	ENST00000553745	MCRIP2	Q9BUT9	160 aa	Known RBP	10.41	□□□□□ -0.74
ABCD4-219	ENST00000553745	KNCN	A6PVL3	124 aa		10.4	□□□□□ -0.74
ABCD4-219	ENST00000553745	FOXI2	Q6ZQN5	318 aa		10.4	□□□□□ -0.74
ABCD4-219	ENST00000553745	CACNG7	P62955	275 aa		10.39	□□□□□ -0.75
ABCD4-219	ENST00000553745	BEAN1	Q3B7T3	259 aa		10.39	□□□□□ -0.75
ABCD4-219	ENST00000553745	LINC00469	Q8N7U9	141 aa		10.39	□□□□□ -0.75
ABCD4-219	ENST00000553745	ST20	Q9HBF5	79 aa		10.39	□□□□□ -0.75
ABCD4-219	ENST00000553745	TRAV21	A0A0B4J279	112 aa		10.39	□□□□□ -0.75
ABCD4-219	ENST00000553745	TNFRSF6B	O95407	300 aa		10.39	□□□□□ -0.75
ABCD4-219	ENST00000553745	CD7	P09564	240 aa		10.39	□□□□□ -0.75
ABCD4-219	ENST00000553745		Q6ZN92	141 aa		10.39	□□□□□ -0.75
ABCD4-219	ENST00000553745	OR11H12	B2RN74	326 aa		10.38	□□□□□ -0.75
ABCD4-219	ENST00000553745	IGKV3-20	P01619	116 aa		10.38	□□□□□ -0.75
ABCD4-219	ENST00000553745	EVI2A	P22794	236 aa		10.38	□□□□□ -0.75
ABCD4-219	ENST00000553745	TSPO	P30536	169 aa		10.38	□□□□□ -0.75
ABCD4-219	ENST00000553745	MAP1LC3A	Q9H492	121 aa		10.38	□□□□□ -0.75
ABCD4-219	ENST00000553745	MRPS16	Q9Y3D3	137 aa	Known RBP	10.38	□□□□□ -0.75
ABCD4-219	ENST00000553745	hDV102S1	A0JD36	115 aa		10.37	□□□□□ -0.75
ABCD4-219	ENST00000553745	PRSS47	A8MTI9	375 aa		10.37	□□□□□ -0.75
ABCD4-219	ENST00000553745	HBD	P02042	147 aa		10.37	□□□□□ -0.75
ABCD4-219	ENST00000553745	HLA-DRB4	P13762	266 aa		10.37	□□□□□ -0.75
ABCD4-219	ENST00000553745	GATA1	P15976	413 aa	Predicted RBP	10.37	□□□□□ -0.75
ABCD4-219	ENST00000553745	HNRNPA3	P51991	378 aa	Known RBP	10.37	□□□□□ -0.75
ABCD4-219	ENST00000553745	DEFB125	Q8N687	156 aa		10.37	□□□□□ -0.75
ABCD4-219	ENST00000553745	WFDC10A	Q9H1F0	79 aa		10.37	□□□□□ -0.75
ABCD4-219	ENST00000553745	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	10.37	□□□□□ -0.75
ABCD4-219	ENST00000553745	HLA-DRB4	X5D2U9	266 aa		10.37	□□□□□ -0.75
ABCD4-219	ENST00000553745	NOTCH3	Q9UM47	2321 aa		10.37	□□□□□ -0.75
ABCD4-219	ENST00000553745		H3BVH4	76 aa		10.37	□□□□□ -0.75
ABCD4-219	ENST00000553745		J3KRW8	73 aa		10.37	□□□□□ -0.75
ABCD4-219	ENST00000553745	WIPF1	O43516	503 aa		10.37	□□□□□ -0.75

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