RNA–Protein interactions for RNA: ENST00000553709.5

ARHGEF40-202, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-202ENST00000553709 TEX22C9J3V5 150 aa11.94□□□□□ -0.5
ARHGEF40-202ENST00000553709 BUB3O43684 328 aa11.94□□□□□ -0.5
ARHGEF40-202ENST00000553709 IGLV1-47P01700 117 aa11.94□□□□□ -0.5
ARHGEF40-202ENST00000553709 LINC00173Q6ZV60 143 aa11.94□□□□□ -0.5
ARHGEF40-202ENST00000553709 SPRY2O43597 315 aa11.93□□□□□ -0.5
ARHGEF40-202ENST00000553709 GTSF1Q8WW33 167 aa11.93□□□□□ -0.5
ARHGEF40-202ENST00000553709 MSRB1Q9NZV6 116 aa11.93□□□□□ -0.5
ARHGEF40-202ENST00000553709 SOCS3O14543 225 aa11.93□□□□□ -0.5
ARHGEF40-202ENST00000553709 DEFB125Q8N687 156 aa11.93□□□□□ -0.5
ARHGEF40-202ENST00000553709 LINC01545Q5VT33 79 aa11.93□□□□□ -0.5
ARHGEF40-202ENST00000553709 AMTNQ6UX39 209 aa11.93□□□□□ -0.5
ARHGEF40-202ENST00000553709 WI2-2373I1.2A0A1W2PRP0 233 aa11.92□□□□□ -0.5
ARHGEF40-202ENST00000553709 ZNF561-AS1K7EIQ3 104 aa11.92□□□□□ -0.5
ARHGEF40-202ENST00000553709 MSMPQ1L6U9 139 aa11.92□□□□□ -0.5
ARHGEF40-202ENST00000553709 TDRG1Q3Y452 100 aa11.92□□□□□ -0.5
ARHGEF40-202ENST00000553709 BOD1L2Q8IYS8 172 aa11.92□□□□□ -0.5
ARHGEF40-202ENST00000553709 Q8N9W7 124 aa11.92□□□□□ -0.5
ARHGEF40-202ENST00000553709 E7EUB6 86 aa11.92□□□□□ -0.5
ARHGEF40-202ENST00000553709 F8WEM9 126 aa11.92□□□□□ -0.5
ARHGEF40-202ENST00000553709 Q6ZVH6 145 aa11.92□□□□□ -0.5
ARHGEF40-202ENST00000553709 PSCAO43653 123 aa11.91□□□□□ -0.5
ARHGEF40-202ENST00000553709 IGHV4-38-2P0DP08 117 aa11.91□□□□□ -0.5
ARHGEF40-202ENST00000553709 MRPL36Q9P0J6 103 aaKnown RBP11.91□□□□□ -0.5
ARHGEF40-202ENST00000553709 AJUBAQ96IF1 538 aa11.91□□□□□ -0.5
ARHGEF40-202ENST00000553709 FREM1Q5H8C1 2179 aa11.91□□□□□ -0.5
ARHGEF40-202ENST00000553709 NXPH4O95158 308 aa11.91□□□□□ -0.5
ARHGEF40-202ENST00000553709 CRYGCP07315 174 aa11.91□□□□□ -0.5
ARHGEF40-202ENST00000553709 C16orf54Q6UWD8 224 aa11.91□□□□□ -0.5
ARHGEF40-202ENST00000553709 RPL39LQ96EH5 51 aaKnown RBP11.91□□□□□ -0.5
ARHGEF40-202ENST00000553709 Q71RC1 249 aaPredicted RBP11.9□□□□□ -0.5
ARHGEF40-202ENST00000553709 P0C879 139 aa11.9□□□□□ -0.5
ARHGEF40-202ENST00000553709 C9orf153Q5TBE3 101 aa11.9□□□□□ -0.5
ARHGEF40-202ENST00000553709 NCOA6Q14686 2063 aaPredicted RBP11.9□□□□□ -0.5
ARHGEF40-202ENST00000553709 U3KQE9 123 aa11.9□□□□□ -0.5
ARHGEF40-202ENST00000553709 BDP1A6H8Y1 2624 aa11.9□□□□□ -0.5
ARHGEF40-202ENST00000553709 APOC4P55056 127 aa11.9□□□□□ -0.51
ARHGEF40-202ENST00000553709 BLCAPP62952 87 aa11.9□□□□□ -0.51
ARHGEF40-202ENST00000553709 CITED2Q99967 270 aaPredicted RBP11.9□□□□□ -0.51
ARHGEF40-202ENST00000553709 NCKAP5O14513 1909 aa11.89□□□□□ -0.51
ARHGEF40-202ENST00000553709 ANKRD39Q53RE8 183 aa11.89□□□□□ -0.51
ARHGEF40-202ENST00000553709 GAGE12HA6NDE8 117 aa11.89□□□□□ -0.51
ARHGEF40-202ENST00000553709 WISP2O76076 250 aa11.89□□□□□ -0.51
ARHGEF40-202ENST00000553709 TRAV13-2A0A0B4J235 113 aa11.89□□□□□ -0.51
ARHGEF40-202ENST00000553709 DEFB136Q30KP8 78 aa11.89□□□□□ -0.51
ARHGEF40-202ENST00000553709 SUMO4Q6EEV6 95 aa11.89□□□□□ -0.51
ARHGEF40-202ENST00000553709 CARD19Q96LW7 228 aa11.89□□□□□ -0.51
ARHGEF40-202ENST00000553709 Q8N7P7 452 aa11.88□□□□□ -0.51
ARHGEF40-202ENST00000553709 C5orf56Q8N8D9 126 aa11.88□□□□□ -0.51
ARHGEF40-202ENST00000553709 IGHV4-30-2A0A087WSY4 118 aa11.88□□□□□ -0.51
ARHGEF40-202ENST00000553709 Q6ZPA2 131 aa11.88□□□□□ -0.51
ARHGEF40-202ENST00000553709 SCRT2Q9NQ03 307 aa11.88□□□□□ -0.51
ARHGEF40-202ENST00000553709 ADORA2A-AS1P86434 159 aa11.88□□□□□ -0.51
ARHGEF40-202ENST00000553709 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.88□□□□□ -0.51
ARHGEF40-202ENST00000553709 IGKV2-29A2NJV5 120 aaPredicted RBP11.88□□□□□ -0.51
ARHGEF40-202ENST00000553709 PRAC2D3DTV9 90 aa11.88□□□□□ -0.51
ARHGEF40-202ENST00000553709 CCL25O15444 150 aa11.88□□□□□ -0.51
ARHGEF40-202ENST00000553709 FAM208BQ5VWN6 2430 aa11.88□□□□□ -0.51
ARHGEF40-202ENST00000553709 CFC1BP0CG36 223 aa11.87□□□□□ -0.51
ARHGEF40-202ENST00000553709 CFC1P0CG37 223 aa11.87□□□□□ -0.51
ARHGEF40-202ENST00000553709 UTF1Q5T230 341 aa11.87□□□□□ -0.51
ARHGEF40-202ENST00000553709 NOP10Q9NPE3 64 aaKnown RBP11.87□□□□□ -0.51
ARHGEF40-202ENST00000553709 COL4A2P08572 1712 aa11.87□□□□□ -0.51
ARHGEF40-202ENST00000553709 CEP350Q5VT06 3117 aa11.87□□□□□ -0.51
ARHGEF40-202ENST00000553709 PCNX3Q9H6A9 2034 aa11.87□□□□□ -0.51
ARHGEF40-202ENST00000553709 PLCE1Q9P212 2302 aa11.87□□□□□ -0.51
ARHGEF40-202ENST00000553709 FRMD6-AS1P0C7T7 363 aa11.87□□□□□ -0.51
ARHGEF40-202ENST00000553709 CRIP3Q6Q6R5 217 aa11.87□□□□□ -0.51
ARHGEF40-202ENST00000553709 SPANXA1Q9NS26 97 aa11.86□□□□□ -0.51
ARHGEF40-202ENST00000553709 ZFP2Q6ZN57 461 aa11.85□□□□□ -0.51
ARHGEF40-202ENST00000553709 CCL24O00175 119 aa11.85□□□□□ -0.51
ARHGEF40-202ENST00000553709 C9orf47Q6ZRZ4 202 aa11.85□□□□□ -0.51
ARHGEF40-202ENST00000553709 A0A096LPF7 62 aa11.85□□□□□ -0.51
ARHGEF40-202ENST00000553709 TRBV6-1A0A0K0K1D8 114 aa11.85□□□□□ -0.51
ARHGEF40-202ENST00000553709 ZFP36P26651 326 aaKnown RBP11.85□□□□□ -0.51
ARHGEF40-202ENST00000553709 SLURP1P55000 103 aa11.85□□□□□ -0.51
ARHGEF40-202ENST00000553709 ANGP03950 147 aaKnown RBP11.85□□□□□ -0.51
ARHGEF40-202ENST00000553709 RNASE8Q8TDE3 154 aaKnown RBP11.85□□□□□ -0.51
ARHGEF40-202ENST00000553709 C10orf105Q8TEF2 133 aa11.85□□□□□ -0.51
ARHGEF40-202ENST00000553709 SS18L2Q9UHA2 77 aa11.85□□□□□ -0.51
ARHGEF40-202ENST00000553709 PROP1O75360 226 aa11.84□□□□□ -0.51
ARHGEF40-202ENST00000553709 Q9H8V8 135 aa11.84□□□□□ -0.51
ARHGEF40-202ENST00000553709 ATG2AQ2TAZ0 1938 aa11.84□□□□□ -0.51
ARHGEF40-202ENST00000553709 CTRLP40313 264 aa11.84□□□□□ -0.51
ARHGEF40-202ENST00000553709 BRWD1-AS2P59051 145 aa11.84□□□□□ -0.51
ARHGEF40-202ENST00000553709 DEFB113Q30KQ7 82 aa11.84□□□□□ -0.51
ARHGEF40-202ENST00000553709 APRG1Q8IVJ8 170 aa11.84□□□□□ -0.51
ARHGEF40-202ENST00000553709 ZNF503Q96F45 646 aa11.84□□□□□ -0.51
ARHGEF40-202ENST00000553709 RNF152Q8N8N0 203 aa11.84□□□□□ -0.51
ARHGEF40-202ENST00000553709 NTN5Q8WTR8 489 aaPredicted RBP11.83□□□□□ -0.51
ARHGEF40-202ENST00000553709 DYSFO75923 2080 aa11.83□□□□□ -0.52
ARHGEF40-202ENST00000553709 C19orf71A6NCJ1 209 aa11.83□□□□□ -0.52
ARHGEF40-202ENST00000553709 NKAPP1Q8N9T2 125 aa11.83□□□□□ -0.52
ARHGEF40-202ENST00000553709 IGKV1D-37A0A075B6S9 117 aa11.83□□□□□ -0.52
ARHGEF40-202ENST00000553709 B5MCH6 92 aa11.83□□□□□ -0.52
ARHGEF40-202ENST00000553709 IGLL5B9A064 214 aa11.83□□□□□ -0.52
ARHGEF40-202ENST00000553709 CGB3P0DN86 165 aa11.83□□□□□ -0.52
ARHGEF40-202ENST00000553709 CGB7P0DN87 165 aa11.83□□□□□ -0.52
ARHGEF40-202ENST00000553709 UBL5Q9BZL1 73 aa11.83□□□□□ -0.52
ARHGEF40-202ENST00000553709 PRB1P04280 392 aa11.82□□□□□ -0.52
ARHGEF40-202ENST00000553709 CLPSL2Q6UWE3 100 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms