RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 RPS20P60866 119 aaKnown RBP1.51□□□□□ -2.17
SCFD1-210ENST00000553693 RAB14P61106 215 aa1.51□□□□□ -2.17
SCFD1-210ENST00000553693 RHOBP62745 196 aa1.51□□□□□ -2.17
SCFD1-210ENST00000553693 EMX2Q04743 252 aa1.51□□□□□ -2.17
SCFD1-210ENST00000553693 DEFB136Q30KP8 78 aa1.51□□□□□ -2.17
SCFD1-210ENST00000553693 C10orf128Q5T292 105 aa1.51□□□□□ -2.17
SCFD1-210ENST00000553693 TRIQKQ629K1 86 aa1.51□□□□□ -2.17
SCFD1-210ENST00000553693 BPIFA4PQ86YQ2 179 aa1.51□□□□□ -2.17
SCFD1-210ENST00000553693 OR51T1Q8NGJ9 327 aa1.51□□□□□ -2.17
SCFD1-210ENST00000553693 H1FXQ92522 213 aaKnown RBP1.51□□□□□ -2.17
SCFD1-210ENST00000553693 C20orf166-AS1Q96NR2 134 aa1.51□□□□□ -2.17
SCFD1-210ENST00000553693 CCDC115Q96NT0 180 aa1.51□□□□□ -2.17
SCFD1-210ENST00000553693 SCGB3A1Q96QR1 104 aa1.51□□□□□ -2.17
SCFD1-210ENST00000553693 NABP2Q9BQ15 211 aa1.51□□□□□ -2.17
SCFD1-210ENST00000553693 TMEM70Q9BUB7 260 aa1.51□□□□□ -2.17
SCFD1-210ENST00000553693 C11orf68Q9H3H3 251 aaKnown RBP1.51□□□□□ -2.17
SCFD1-210ENST00000553693 NDUFAF1Q9Y375 327 aa1.51□□□□□ -2.17
SCFD1-210ENST00000553693 VPS13DQ5THJ4 4388 aa1.5□□□□□ -2.17
SCFD1-210ENST00000553693 IGHV3-64A0A075B6Q5 118 aa1.5□□□□□ -2.17
SCFD1-210ENST00000553693 TRGV4A0A0C4DH28 118 aa1.5□□□□□ -2.17
SCFD1-210ENST00000553693 G3V2T6 193 aa1.5□□□□□ -2.17
SCFD1-210ENST00000553693 H7C2G1 150 aa1.5□□□□□ -2.17
SCFD1-210ENST00000553693 J3QRE1 110 aa1.5□□□□□ -2.17
SCFD1-210ENST00000553693 AIPO00170 330 aa1.5□□□□□ -2.17
SCFD1-210ENST00000553693 KPNA4O00629 521 aaPredicted RBP1.5□□□□□ -2.17
SCFD1-210ENST00000553693 RER1O15258 196 aa1.5□□□□□ -2.17
SCFD1-210ENST00000553693 PFDN1O60925 122 aa1.5□□□□□ -2.17
SCFD1-210ENST00000553693 OR5F1O95221 314 aa1.5□□□□□ -2.17
SCFD1-210ENST00000553693 NDUFC2O95298 119 aa1.5□□□□□ -2.17
SCFD1-210ENST00000553693 IGHV3-7P01780 117 aa1.5□□□□□ -2.17
SCFD1-210ENST00000553693 ASAH2BP0C7U1 165 aa1.5□□□□□ -2.17
SCFD1-210ENST00000553693 S100A3P33764 101 aa1.5□□□□□ -2.17
SCFD1-210ENST00000553693 PHBP35232 272 aa1.5□□□□□ -2.17
SCFD1-210ENST00000553693 RPL28P46779 137 aaKnown RBP1.5□□□□□ -2.17
SCFD1-210ENST00000553693 DYNLT3P51808 116 aa1.5□□□□□ -2.17
SCFD1-210ENST00000553693 PCBD1P61457 104 aa1.5□□□□□ -2.17
SCFD1-210ENST00000553693 KRR1Q13601 381 aaKnown RBP1.5□□□□□ -2.17
SCFD1-210ENST00000553693 SLC36A1Q7Z2H8 476 aa1.5□□□□□ -2.17
SCFD1-210ENST00000553693 OR9Q1Q8NGQ5 310 aa1.5□□□□□ -2.17
SCFD1-210ENST00000553693 OR13C6PQ8NH95 151 aa1.5□□□□□ -2.17
SCFD1-210ENST00000553693 TMEM106AQ96A25 262 aa1.5□□□□□ -2.17
SCFD1-210ENST00000553693 MALSU1Q96EH3 234 aa1.5□□□□□ -2.17
SCFD1-210ENST00000553693 DNAJC30Q96LL9 226 aa1.5□□□□□ -2.17
SCFD1-210ENST00000553693 C2orf50Q96LR7 162 aa1.5□□□□□ -2.17
SCFD1-210ENST00000553693 GAFA1Q96PS6 74 aa1.5□□□□□ -2.17
SCFD1-210ENST00000553693 PBDC1Q9BVG4 233 aa1.5□□□□□ -2.17
SCFD1-210ENST00000553693 C20orf27Q9GZN8 174 aa1.5□□□□□ -2.17
SCFD1-210ENST00000553693 BCL2L10Q9HD36 194 aa1.5□□□□□ -2.17
SCFD1-210ENST00000553693 C19orf12Q9NSK7 152 aa1.5□□□□□ -2.17
SCFD1-210ENST00000553693 GID8Q9NWU2 228 aa1.5□□□□□ -2.17
SCFD1-210ENST00000553693 IDI2-AS1Q9NZ38 188 aa1.5□□□□□ -2.17
SCFD1-210ENST00000553693 CALML5Q9NZT1 146 aa1.5□□□□□ -2.17
SCFD1-210ENST00000553693 PYCARDQ9ULZ3 195 aa1.5□□□□□ -2.17
SCFD1-210ENST00000553693 UTP11Q9Y3A2 253 aaKnown RBP1.5□□□□□ -2.17
SCFD1-210ENST00000553693 HILPDAQ9Y5L2 63 aa1.5□□□□□ -2.17
SCFD1-210ENST00000553693 PKHD1P08F94 4074 aa1.5□□□□□ -2.17
SCFD1-210ENST00000553693 HSPG2P98160 4391 aa1.49□□□□□ -2.17
SCFD1-210ENST00000553693 KMT2AQ03164 3969 aa1.49□□□□□ -2.17
SCFD1-210ENST00000553693 DNAH11Q96DT5 4516 aa1.49□□□□□ -2.17
SCFD1-210ENST00000553693 RFPL4AA6NLU0 287 aa1.49□□□□□ -2.17
SCFD1-210ENST00000553693 CPSF4LA6NMK7 179 aaKnown RBP1.49□□□□□ -2.17
SCFD1-210ENST00000553693 HMSDA8MTL9 139 aa1.49□□□□□ -2.17
SCFD1-210ENST00000553693 ODF3BA8MYP8 253 aa1.49□□□□□ -2.17
SCFD1-210ENST00000553693 RFPL4AL1F8VTS6 287 aa1.49□□□□□ -2.17
SCFD1-210ENST00000553693 H3BSH0 61 aa1.49□□□□□ -2.17
SCFD1-210ENST00000553693 H7C1C5 153 aa1.49□□□□□ -2.17
SCFD1-210ENST00000553693 IFNA1P01562 189 aa1.49□□□□□ -2.17
SCFD1-210ENST00000553693 PPBPP02775 128 aa1.49□□□□□ -2.17
SCFD1-210ENST00000553693 LGALS1P09382 135 aaKnown RBP1.49□□□□□ -2.17
SCFD1-210ENST00000553693 TSPAN19P0C672 248 aa1.49□□□□□ -2.17
SCFD1-210ENST00000553693 METTL15P1P0C7V9 234 aa1.49□□□□□ -2.17
SCFD1-210ENST00000553693 IFI30P13284 250 aa1.49□□□□□ -2.17
SCFD1-210ENST00000553693 CCL3L1P16619 93 aa1.49□□□□□ -2.17
SCFD1-210ENST00000553693 GUCA1AP43080 201 aaPredicted RBP1.49□□□□□ -2.17
SCFD1-210ENST00000553693 CAV3P56539 151 aa1.49□□□□□ -2.17
SCFD1-210ENST00000553693 TCTAP57738 103 aa1.49□□□□□ -2.17
SCFD1-210ENST00000553693 YPEL3P61236 119 aaPredicted RBP1.49□□□□□ -2.17
SCFD1-210ENST00000553693 GNG11P61952 73 aa1.49□□□□□ -2.17
SCFD1-210ENST00000553693 LCN6P62502 163 aa1.49□□□□□ -2.17
SCFD1-210ENST00000553693 KRTAP13-4Q3LI77 160 aa1.49□□□□□ -2.17
SCFD1-210ENST00000553693 AKR1C8PQ5T2L2 129 aa1.49□□□□□ -2.17
SCFD1-210ENST00000553693 TMEM42Q69YG0 159 aa1.49□□□□□ -2.17
SCFD1-210ENST00000553693 DHRS4L2Q6PKH6 230 aa1.49□□□□□ -2.17
SCFD1-210ENST00000553693 GOLT1AQ6ZVE7 132 aa1.49□□□□□ -2.17
SCFD1-210ENST00000553693 KTN1-AS1Q86SY8 53 aa1.49□□□□□ -2.17
SCFD1-210ENST00000553693 CROCCP2Q86T23 111 aa1.49□□□□□ -2.17
SCFD1-210ENST00000553693 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.49□□□□□ -2.17
SCFD1-210ENST00000553693 ZNF439Q8NDP4 499 aa1.49□□□□□ -2.17
SCFD1-210ENST00000553693 OR11H6Q8NGC7 330 aa1.49□□□□□ -2.17
SCFD1-210ENST00000553693 OR52L1Q8NGH7 329 aa1.49□□□□□ -2.17
SCFD1-210ENST00000553693 OR4D11Q8NGI4 311 aa1.49□□□□□ -2.17
SCFD1-210ENST00000553693 PFN4Q8NHR9 129 aa1.49□□□□□ -2.17
SCFD1-210ENST00000553693 RASSF5Q8WWW0 418 aa1.49□□□□□ -2.17
SCFD1-210ENST00000553693 ADAT1Q9BUB4 502 aaKnown RBP1.49□□□□□ -2.17
SCFD1-210ENST00000553693 DERL1Q9BUN8 251 aa1.49□□□□□ -2.17
SCFD1-210ENST00000553693 CST9LQ9H4G1 147 aa1.49□□□□□ -2.17
SCFD1-210ENST00000553693 TPT1P8Q9HAU6 139 aa1.49□□□□□ -2.17
SCFD1-210ENST00000553693 CACYBPQ9HB71 228 aaKnown RBP1.49□□□□□ -2.17
SCFD1-210ENST00000553693 C8orf4Q9NR00 106 aa1.49□□□□□ -2.17
SCFD1-210ENST00000553693 ARMC1Q9NVT9 282 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms