RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 APRG1Q8IVJ8 170 aa11.78□□□□□ -0.52
ACTN1-209ENST00000553659 TMEM256Q8N2U0 113 aa11.78□□□□□ -0.52
ACTN1-209ENST00000553659 C18orf32Q8TCD1 76 aa11.78□□□□□ -0.52
ACTN1-209ENST00000553659 DCANP1Q8TF63 244 aa11.78□□□□□ -0.52
ACTN1-209ENST00000553659 NIT2Q9NQR4 276 aa11.78□□□□□ -0.52
ACTN1-209ENST00000553659 TP53TG3Q9ULZ0 132 aa11.78□□□□□ -0.52
ACTN1-209ENST00000553659 TMSB15BA0A087X1C1 80 aa11.77□□□□□ -0.53
ACTN1-209ENST00000553659 GPX1P07203 203 aa11.77□□□□□ -0.53
ACTN1-209ENST00000553659 FAM19A4Q96LR4 140 aa11.77□□□□□ -0.53
ACTN1-209ENST00000553659 TPPP3Q9BW30 176 aa11.77□□□□□ -0.53
ACTN1-209ENST00000553659 SSBP4Q9BWG4 385 aaPredicted RBP11.77□□□□□ -0.53
ACTN1-209ENST00000553659 MS4A6AQ9H2W1 248 aa11.77□□□□□ -0.53
ACTN1-209ENST00000553659 K7EQG2 157 aa11.76□□□□□ -0.53
ACTN1-209ENST00000553659 RAB4AP20338 218 aa11.76□□□□□ -0.53
ACTN1-209ENST00000553659 CACNG7P62955 275 aa11.76□□□□□ -0.53
ACTN1-209ENST00000553659 IQCJQ1A5X6 159 aa11.76□□□□□ -0.53
ACTN1-209ENST00000553659 DUSP14O95147 198 aaKnown RBP11.75□□□□□ -0.53
ACTN1-209ENST00000553659 MED14OSP0DP75 135 aa11.75□□□□□ -0.53
ACTN1-209ENST00000553659 LEPP41159 167 aa11.75□□□□□ -0.53
ACTN1-209ENST00000553659 TMEM61Q8N0U2 210 aa11.75□□□□□ -0.53
ACTN1-209ENST00000553659 LINC00476Q8WZB0 136 aa11.75□□□□□ -0.53
ACTN1-209ENST00000553659 CHCHD1Q96BP2 118 aaKnown RBP11.75□□□□□ -0.53
ACTN1-209ENST00000553659 OVOL2Q9BRP0 275 aa11.75□□□□□ -0.53
ACTN1-209ENST00000553659 ZNF324O75467 553 aaPredicted RBP11.74□□□□□ -0.53
ACTN1-209ENST00000553659 OR5AL1P0C617 328 aa11.74□□□□□ -0.53
ACTN1-209ENST00000553659 PMCHP20382 165 aa11.74□□□□□ -0.53
ACTN1-209ENST00000553659 LINC00310P59036 64 aa11.74□□□□□ -0.53
ACTN1-209ENST00000553659 EBLN2Q6P2I7 272 aa11.74□□□□□ -0.53
ACTN1-209ENST00000553659 SMIM15Q7Z3B0 74 aa11.74□□□□□ -0.53
ACTN1-209ENST00000553659 ZFAND2AQ8N6M9 145 aa11.74□□□□□ -0.53
ACTN1-209ENST00000553659 TMEM191AQ9H0A3 160 aa11.74□□□□□ -0.53
ACTN1-209ENST00000553659 SELENOKQ9Y6D0 94 aa11.74□□□□□ -0.53
ACTN1-209ENST00000553659 IGKV3-7A0A075B6H7 116 aa11.73□□□□□ -0.53
ACTN1-209ENST00000553659 IGKV3D-20A0A0C4DH25 116 aa11.73□□□□□ -0.53
ACTN1-209ENST00000553659 SNAI2O43623 268 aa11.73□□□□□ -0.53
ACTN1-209ENST00000553659 HSBP1O75506 76 aa11.73□□□□□ -0.53
ACTN1-209ENST00000553659 PRB4P10163 310 aaPredicted RBP11.73□□□□□ -0.53
ACTN1-209ENST00000553659 TSPOP30536 169 aa11.73□□□□□ -0.53
ACTN1-209ENST00000553659 AMTP48728 403 aa11.73□□□□□ -0.53
ACTN1-209ENST00000553659 TWIST1Q15672 202 aa11.73□□□□□ -0.53
ACTN1-209ENST00000553659 FAM104BQ5XKR9 115 aa11.73□□□□□ -0.53
ACTN1-209ENST00000553659 PLECQ15149 4684 aaKnown RBP11.72□□□□□ -0.53
ACTN1-209ENST00000553659 IGHV4-4A0A075B6R2 117 aa11.72□□□□□ -0.53
ACTN1-209ENST00000553659 NUPR1O60356 82 aa11.72□□□□□ -0.53
ACTN1-209ENST00000553659 LY6G6CO95867 125 aa11.72□□□□□ -0.53
ACTN1-209ENST00000553659 PPBPP02775 128 aa11.72□□□□□ -0.53
ACTN1-209ENST00000553659 LAMTOR2Q9Y2Q5 125 aa11.72□□□□□ -0.53
ACTN1-209ENST00000553659 TRAV25A0A0B4J276 109 aa11.71□□□□□ -0.53
ACTN1-209ENST00000553659 KLLNB2CW77 178 aa11.71□□□□□ -0.53
ACTN1-209ENST00000553659 PSMG4Q5JS54 123 aa11.71□□□□□ -0.53
ACTN1-209ENST00000553659 FOXI2Q6ZQN5 318 aa11.71□□□□□ -0.53
ACTN1-209ENST00000553659 WFDC3Q8IUB2 231 aa11.71□□□□□ -0.53
ACTN1-209ENST00000553659 ORMDL3Q8N138 153 aa11.71□□□□□ -0.53
ACTN1-209ENST00000553659 A0A0J9YX75 114 aa11.7□□□□□ -0.54
ACTN1-209ENST00000553659 NUPR2A6NF83 97 aa11.7□□□□□ -0.54
ACTN1-209ENST00000553659 NTF3P20783 257 aa11.7□□□□□ -0.54
ACTN1-209ENST00000553659 ASIPP42127 132 aa11.7□□□□□ -0.54
ACTN1-209ENST00000553659 ALMS1Q8TCU4 4167 aa11.69□□□□□ -0.54
ACTN1-209ENST00000553659 ZNF688P0C7X2 276 aa11.69□□□□□ -0.54
ACTN1-209ENST00000553659 ZNF705DP0CH99 300 aaPredicted RBP11.69□□□□□ -0.54
ACTN1-209ENST00000553659 ZNF705BP0CI00 300 aaPredicted RBP11.69□□□□□ -0.54
ACTN1-209ENST00000553659 RNASEKQ6P5S7 137 aaKnown RBP11.69□□□□□ -0.54
ACTN1-209ENST00000553659 NIT1Q86X76 327 aa11.69□□□□□ -0.54
ACTN1-209ENST00000553659 TP53TG1Q9Y2A0 90 aa11.69□□□□□ -0.54
ACTN1-209ENST00000553659 A0A0J9YWU9 116 aa11.68□□□□□ -0.54
ACTN1-209ENST00000553659 LINC00614P0C842 121 aa11.68□□□□□ -0.54
ACTN1-209ENST00000553659 TFPI2P48307 235 aa11.68□□□□□ -0.54
ACTN1-209ENST00000553659 PRR9Q5T870 116 aa11.68□□□□□ -0.54
ACTN1-209ENST00000553659 CEMP1Q6PRD7 247 aaPredicted RBP11.68□□□□□ -0.54
ACTN1-209ENST00000553659 Q6ZWC4 215 aa11.68□□□□□ -0.54
ACTN1-209ENST00000553659 ZNF575Q86XF7 245 aa11.68□□□□□ -0.54
ACTN1-209ENST00000553659 C11orf21Q9P2W6 132 aa11.68□□□□□ -0.54
ACTN1-209ENST00000553659 OR4C46A6NHA9 309 aa11.67□□□□□ -0.54
ACTN1-209ENST00000553659 F6UB75 175 aa11.67□□□□□ -0.54
ACTN1-209ENST00000553659 M0R2Z0 102 aa11.67□□□□□ -0.54
ACTN1-209ENST00000553659 SPRY2O43597 315 aa11.67□□□□□ -0.54
ACTN1-209ENST00000553659 SCGB1D1O95968 90 aa11.67□□□□□ -0.54
ACTN1-209ENST00000553659 S100A4P26447 101 aaKnown RBP11.67□□□□□ -0.54
ACTN1-209ENST00000553659 RNASE4P34096 147 aaKnown RBP11.67□□□□□ -0.54
ACTN1-209ENST00000553659 APOC4P55056 127 aa11.67□□□□□ -0.54
ACTN1-209ENST00000553659 SPANXN1Q5VSR9 72 aa11.67□□□□□ -0.54
ACTN1-209ENST00000553659 SPAG8Q99932 426 aaPredicted RBP11.67□□□□□ -0.54
ACTN1-209ENST00000553659 NAGKQ9UJ70 344 aa11.67□□□□□ -0.54
ACTN1-209ENST00000553659 C7orf71A4D174 169 aa11.66□□□□□ -0.54
ACTN1-209ENST00000553659 PCP4L1A6NKN8 68 aa11.66□□□□□ -0.54
ACTN1-209ENST00000553659 CKS2P33552 79 aa11.66□□□□□ -0.54
ACTN1-209ENST00000553659 MRPL51Q4U2R6 128 aaKnown RBP11.66□□□□□ -0.54
ACTN1-209ENST00000553659 FAM159AQ6UWV7 190 aa11.66□□□□□ -0.54
ACTN1-209ENST00000553659 FA2HQ7L5A8 372 aa11.66□□□□□ -0.54
ACTN1-209ENST00000553659 AMN1Q8IY45 258 aa11.66□□□□□ -0.54
ACTN1-209ENST00000553659 PRELID3AQ96N28 172 aa11.66□□□□□ -0.54
ACTN1-209ENST00000553659 D6R8Y8 96 aa11.65□□□□□ -0.54
ACTN1-209ENST00000553659 TSTD3H0UI37 97 aa11.65□□□□□ -0.54
ACTN1-209ENST00000553659 CDKN1BP46527 198 aa11.65□□□□□ -0.54
ACTN1-209ENST00000553659 CMC4P56277 68 aaPredicted RBP11.65□□□□□ -0.54
ACTN1-209ENST00000553659 PKIAP61925 76 aa11.65□□□□□ -0.54
ACTN1-209ENST00000553659 KRTAP17-1Q9BYP8 105 aa11.65□□□□□ -0.54
ACTN1-209ENST00000553659 GSN-AS1Q9NRJ2 163 aa11.65□□□□□ -0.54
ACTN1-209ENST00000553659 KLK5Q9Y337 293 aaPredicted RBP11.65□□□□□ -0.54
ACTN1-209ENST00000553659 A8MTW9 85 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms