RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 IL36BQ9NZH7 164 aa8.2□□□□□ -1.1
TRAFD1-209ENST00000552896 RBFOX3A6NFN3 312 aa8.19□□□□□ -1.1
TRAFD1-209ENST00000552896 TMEM250H0YL14 139 aa8.19□□□□□ -1.1
TRAFD1-209ENST00000552896 M0R036 132 aa8.19□□□□□ -1.1
TRAFD1-209ENST00000552896 NDUFS6O75380 124 aaKnown RBP8.19□□□□□ -1.1
TRAFD1-209ENST00000552896 CXCL1P09341 107 aa8.19□□□□□ -1.1
TRAFD1-209ENST00000552896 S100A4P26447 101 aaKnown RBP8.19□□□□□ -1.1
TRAFD1-209ENST00000552896 PIK3CD-AS1Q5SR53 167 aa8.19□□□□□ -1.1
TRAFD1-209ENST00000552896 MED9Q9NWA0 146 aa8.19□□□□□ -1.1
TRAFD1-209ENST00000552896 TRBV20OR9-2A0A075B6H5 130 aa8.18□□□□□ -1.1
TRAFD1-209ENST00000552896 H3BVH4 76 aa8.18□□□□□ -1.1
TRAFD1-209ENST00000552896 NUDT3O95989 172 aa8.18□□□□□ -1.1
TRAFD1-209ENST00000552896 IGLV2-8P01709 118 aa8.18□□□□□ -1.1
TRAFD1-209ENST00000552896 IGHV3-53P01767 116 aa8.18□□□□□ -1.1
TRAFD1-209ENST00000552896 SLAQ13239 276 aa8.18□□□□□ -1.1
TRAFD1-209ENST00000552896 ZNF876PQ49A33 203 aa8.18□□□□□ -1.1
TRAFD1-209ENST00000552896 TOR2AQ5JU69 321 aa8.18□□□□□ -1.1
TRAFD1-209ENST00000552896 PRR27Q6MZM9 219 aa8.18□□□□□ -1.1
TRAFD1-209ENST00000552896 FAM210AQ96ND0 272 aa8.18□□□□□ -1.1
TRAFD1-209ENST00000552896 PRO0255Q9UI72 69 aa8.18□□□□□ -1.1
TRAFD1-209ENST00000552896 A0A0J9YY99 117 aa8.17□□□□□ -1.1
TRAFD1-209ENST00000552896 C9JCJ5 164 aa8.17□□□□□ -1.1
TRAFD1-209ENST00000552896 SFTA3P0C7M3 94 aa8.17□□□□□ -1.1
TRAFD1-209ENST00000552896 MED14OSP0DP75 135 aa8.17□□□□□ -1.1
TRAFD1-209ENST00000552896 FHL2Q14192 279 aa8.17□□□□□ -1.1
TRAFD1-209ENST00000552896 RNF212Q495C1 297 aa8.17□□□□□ -1.1
TRAFD1-209ENST00000552896 UBE2DNLQ8IWF7 75 aa8.17□□□□□ -1.1
TRAFD1-209ENST00000552896 POM121L12Q8N7R1 296 aa8.17□□□□□ -1.1
TRAFD1-209ENST00000552896 OR4C5Q8NGB2 326 aa8.17□□□□□ -1.1
TRAFD1-209ENST00000552896 VSIG2Q96IQ7 327 aa8.17□□□□□ -1.1
TRAFD1-209ENST00000552896 ZNF479Q96JC4 524 aa8.17□□□□□ -1.1
TRAFD1-209ENST00000552896 BIN3Q9NQY0 253 aa8.17□□□□□ -1.1
TRAFD1-209ENST00000552896 TRGV4A0A0C4DH28 118 aa8.16□□□□□ -1.1
TRAFD1-209ENST00000552896 RAB19A4D1S5 217 aa8.16□□□□□ -1.1
TRAFD1-209ENST00000552896 PGPEP1LA6NFU8 196 aa8.16□□□□□ -1.1
TRAFD1-209ENST00000552896 CIDEAO60543 219 aa8.16□□□□□ -1.1
TRAFD1-209ENST00000552896 MGST1P10620 155 aaKnown RBP8.16□□□□□ -1.1
TRAFD1-209ENST00000552896 CRYBA4P53673 196 aa8.16□□□□□ -1.1
TRAFD1-209ENST00000552896 FAM3BP58499 235 aaPredicted RBP8.16□□□□□ -1.1
TRAFD1-209ENST00000552896 ZNF575Q86XF7 245 aa8.16□□□□□ -1.1
TRAFD1-209ENST00000552896 EIF5A2Q9GZV4 153 aaKnown RBP8.16□□□□□ -1.1
TRAFD1-209ENST00000552896 PARLQ9H300 379 aa8.16□□□□□ -1.1
TRAFD1-209ENST00000552896 SCRT2Q9NQ03 307 aa8.16□□□□□ -1.1
TRAFD1-209ENST00000552896 TMSB15BA0A087X1C1 80 aa8.15□□□□□ -1.1
TRAFD1-209ENST00000552896 GRIFINA4D1Z8 144 aa8.15□□□□□ -1.1
TRAFD1-209ENST00000552896 C19orf71A6NCJ1 209 aa8.15□□□□□ -1.1
TRAFD1-209ENST00000552896 RS1O15537 224 aa8.15□□□□□ -1.1
TRAFD1-209ENST00000552896 PAX4O43316 350 aa8.15□□□□□ -1.1
TRAFD1-209ENST00000552896 ARMS2P0C7Q2 107 aa8.15□□□□□ -1.1
TRAFD1-209ENST00000552896 RPL19P84098 196 aaKnown RBP8.15□□□□□ -1.1
TRAFD1-209ENST00000552896 CFAP126Q5VTH2 177 aa8.15□□□□□ -1.1
TRAFD1-209ENST00000552896 SYT8Q8NBV8 401 aa8.15□□□□□ -1.1
TRAFD1-209ENST00000552896 HHLA3Q9XRX5 114 aa8.15□□□□□ -1.1
TRAFD1-209ENST00000552896 ICOSQ9Y6W8 199 aa8.15□□□□□ -1.1
TRAFD1-209ENST00000552896 A8MWV9 139 aa8.14□□□□□ -1.11
TRAFD1-209ENST00000552896 NXPH4O95158 308 aa8.14□□□□□ -1.11
TRAFD1-209ENST00000552896 GATA1P15976 413 aaPredicted RBP8.14□□□□□ -1.11
TRAFD1-209ENST00000552896 ZFP82Q8N141 532 aa8.14□□□□□ -1.11
TRAFD1-209ENST00000552896 DAZAP1Q96EP5 407 aaKnown RBP8.14□□□□□ -1.11
TRAFD1-209ENST00000552896 PHLDA3Q9Y5J5 127 aa8.14□□□□□ -1.11
TRAFD1-209ENST00000552896 FRAS1Q86XX4 4008 aa8.14□□□□□ -1.11
TRAFD1-209ENST00000552896 A0A096LPF7 62 aa8.13□□□□□ -1.11
TRAFD1-209ENST00000552896 RHODO00212 210 aa8.13□□□□□ -1.11
TRAFD1-209ENST00000552896 SNAI2O43623 268 aa8.13□□□□□ -1.11
TRAFD1-209ENST00000552896 P01737 135 aa8.13□□□□□ -1.11
TRAFD1-209ENST00000552896 OR5AL1P0C617 328 aa8.13□□□□□ -1.11
TRAFD1-209ENST00000552896 CCL18P55774 89 aa8.13□□□□□ -1.11
TRAFD1-209ENST00000552896 RPS20P60866 119 aaKnown RBP8.13□□□□□ -1.11
TRAFD1-209ENST00000552896 ZFP2Q6ZN57 461 aa8.13□□□□□ -1.11
TRAFD1-209ENST00000552896 PCNPQ8WW12 178 aaKnown RBP8.13□□□□□ -1.11
TRAFD1-209ENST00000552896 XKRY2A2RUG3 117 aa8.12□□□□□ -1.11
TRAFD1-209ENST00000552896 K7EN84 100 aa8.12□□□□□ -1.11
TRAFD1-209ENST00000552896 M0R381 172 aa8.12□□□□□ -1.11
TRAFD1-209ENST00000552896 MRPL23Q16540 153 aaKnown RBP8.12□□□□□ -1.11
TRAFD1-209ENST00000552896 OR2D3Q8NGH3 330 aa8.12□□□□□ -1.11
TRAFD1-209ENST00000552896 SMIM7Q9BQ49 75 aa8.12□□□□□ -1.11
TRAFD1-209ENST00000552896 SSBP4Q9BWG4 385 aaPredicted RBP8.12□□□□□ -1.11
TRAFD1-209ENST00000552896 LY96Q9Y6Y9 160 aa8.12□□□□□ -1.11
TRAFD1-209ENST00000552896 TRBV6-4A0A1B0GX49 114 aa8.11□□□□□ -1.11
TRAFD1-209ENST00000552896 K7EQD1 137 aa8.11□□□□□ -1.11
TRAFD1-209ENST00000552896 SRP19P09132 144 aaKnown RBP8.11□□□□□ -1.11
TRAFD1-209ENST00000552896 GYPEP15421 78 aa8.11□□□□□ -1.11
TRAFD1-209ENST00000552896 SRIP30626 198 aa8.11□□□□□ -1.11
TRAFD1-209ENST00000552896 CEBPGP53567 150 aa8.11□□□□□ -1.11
TRAFD1-209ENST00000552896 RHOHQ15669 191 aa8.11□□□□□ -1.11
TRAFD1-209ENST00000552896 UFSP1Q6NVU6 142 aa8.11□□□□□ -1.11
TRAFD1-209ENST00000552896 OR10AG1Q8NH19 301 aa8.11□□□□□ -1.11
TRAFD1-209ENST00000552896 SFRP2Q96HF1 295 aa8.11□□□□□ -1.11
TRAFD1-209ENST00000552896 UPK3BQ9BT76 320 aa8.11□□□□□ -1.11
TRAFD1-209ENST00000552896 MRPS16Q9Y3D3 137 aaKnown RBP8.11□□□□□ -1.11
TRAFD1-209ENST00000552896 LINC00588Q9Y4M8 146 aa8.11□□□□□ -1.11
TRAFD1-209ENST00000552896 DNAH10Q8IVF4 4471 aa8.11□□□□□ -1.11
TRAFD1-209ENST00000552896 IGLC6P0CF74 106 aa8.1□□□□□ -1.11
TRAFD1-209ENST00000552896 NEGR1Q7Z3B1 354 aa8.1□□□□□ -1.11
TRAFD1-209ENST00000552896 SH2D6Q7Z4S9 175 aa8.1□□□□□ -1.11
TRAFD1-209ENST00000552896 SLC25A29Q8N8R3 303 aa8.1□□□□□ -1.11
TRAFD1-209ENST00000552896 FER1L6-AS1Q8NA97 138 aa8.1□□□□□ -1.11
TRAFD1-209ENST00000552896 ZNRF2Q8NHG8 242 aa8.1□□□□□ -1.11
TRAFD1-209ENST00000552896 OCC1Q8TAD7 63 aa8.1□□□□□ -1.11
TRAFD1-209ENST00000552896 PRADC1Q9BSG0 188 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms