RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 UBTD1Q9HAC8 227 aa4.53□□□□□ -1.68
CHMP4A-210ENST00000552620 CEP250Q9BV73 2442 aa4.52□□□□□ -1.69
CHMP4A-210ENST00000552620 IGHV3OR16-8A0A075B7F1 116 aa4.52□□□□□ -1.69
CHMP4A-210ENST00000552620 IGHV1-69DA0A0B4J2H0 117 aa4.52□□□□□ -1.69
CHMP4A-210ENST00000552620 A0A1W2PPR1 153 aa4.52□□□□□ -1.69
CHMP4A-210ENST00000552620 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.52□□□□□ -1.69
CHMP4A-210ENST00000552620 IGHV1-69P01742 117 aa4.52□□□□□ -1.69
CHMP4A-210ENST00000552620 TRGV3P03979 118 aa4.52□□□□□ -1.69
CHMP4A-210ENST00000552620 C10orf25Q5T742 122 aa4.52□□□□□ -1.69
CHMP4A-210ENST00000552620 ZC2HC1BQ5TFG8 222 aa4.52□□□□□ -1.69
CHMP4A-210ENST00000552620 ERASQ7Z444 233 aa4.52□□□□□ -1.69
CHMP4A-210ENST00000552620 CEND1Q8N111 149 aa4.52□□□□□ -1.69
CHMP4A-210ENST00000552620 SMIM2Q9BVW6 85 aa4.52□□□□□ -1.69
CHMP4A-210ENST00000552620 BPESC1Q9GZL8 116 aa4.52□□□□□ -1.69
CHMP4A-210ENST00000552620 DPH3P1Q9H4G8 78 aa4.52□□□□□ -1.69
CHMP4A-210ENST00000552620 SPCS1Q9Y6A9 102 aa4.52□□□□□ -1.69
CHMP4A-210ENST00000552620 TRBV25-1A0A075B6N4 114 aa4.51□□□□□ -1.69
CHMP4A-210ENST00000552620 TRAV40A0A0B4J280 105 aa4.51□□□□□ -1.69
CHMP4A-210ENST00000552620 F8VRH5 84 aa4.51□□□□□ -1.69
CHMP4A-210ENST00000552620 G3V4G9 280 aa4.51□□□□□ -1.69
CHMP4A-210ENST00000552620 SOCS3O14543 225 aa4.51□□□□□ -1.69
CHMP4A-210ENST00000552620 ZNF207O43670 478 aaKnown RBP4.51□□□□□ -1.69
CHMP4A-210ENST00000552620 GAS8-AS1O95177 125 aa4.51□□□□□ -1.69
CHMP4A-210ENST00000552620 IGHG2P01859 326 aa4.51□□□□□ -1.69
CHMP4A-210ENST00000552620 SLPIP03973 132 aa4.51□□□□□ -1.69
CHMP4A-210ENST00000552620 GATA1P15976 413 aaPredicted RBP4.51□□□□□ -1.69
CHMP4A-210ENST00000552620 S100A4P26447 101 aaKnown RBP4.51□□□□□ -1.69
CHMP4A-210ENST00000552620 ASIPP42127 132 aa4.51□□□□□ -1.69
CHMP4A-210ENST00000552620 RPL32P62910 135 aaKnown RBP4.51□□□□□ -1.69
CHMP4A-210ENST00000552620 NEGR1Q7Z3B1 354 aa4.51□□□□□ -1.69
CHMP4A-210ENST00000552620 GTSCR1Q86UQ5 136 aa4.51□□□□□ -1.69
CHMP4A-210ENST00000552620 ZFAND2AQ8N6M9 145 aa4.51□□□□□ -1.69
CHMP4A-210ENST00000552620 POM121L12Q8N7R1 296 aa4.51□□□□□ -1.69
CHMP4A-210ENST00000552620 TOMM6Q96B49 74 aa4.51□□□□□ -1.69
CHMP4A-210ENST00000552620 FAM19A4Q96LR4 140 aa4.51□□□□□ -1.69
CHMP4A-210ENST00000552620 VPS25Q9BRG1 176 aa4.51□□□□□ -1.69
CHMP4A-210ENST00000552620 CHAC1Q9BUX1 264 aa4.51□□□□□ -1.69
CHMP4A-210ENST00000552620 ZNF580Q9UK33 172 aa4.51□□□□□ -1.69
CHMP4A-210ENST00000552620 UFC1Q9Y3C8 167 aa4.51□□□□□ -1.69
CHMP4A-210ENST00000552620 MUC3AQ02505 3323 aa4.51□□□□□ -1.69
CHMP4A-210ENST00000552620 MAP1BP46821 2468 aaKnown RBP4.51□□□□□ -1.69
CHMP4A-210ENST00000552620 MGAQ8IWI9 3026 aa4.5□□□□□ -1.69
CHMP4A-210ENST00000552620 IGHV3OR16-13A0A075B7E8 117 aa4.5□□□□□ -1.69
CHMP4A-210ENST00000552620 IGKV2D-26A0A0A0MRZ7 120 aa4.5□□□□□ -1.69
CHMP4A-210ENST00000552620 IGHV3-74A0A0B4J1X5 117 aa4.5□□□□□ -1.69
CHMP4A-210ENST00000552620 A6NDX4 124 aa4.5□□□□□ -1.69
CHMP4A-210ENST00000552620 H3BVH4 76 aa4.5□□□□□ -1.69
CHMP4A-210ENST00000552620 K7EMT4 169 aa4.5□□□□□ -1.69
CHMP4A-210ENST00000552620 NDUFS8O00217 210 aa4.5□□□□□ -1.69
CHMP4A-210ENST00000552620 VCYO14598 125 aa4.5□□□□□ -1.69
CHMP4A-210ENST00000552620 CIDEAO60543 219 aa4.5□□□□□ -1.69
CHMP4A-210ENST00000552620 ID1P41134 155 aa4.5□□□□□ -1.69
CHMP4A-210ENST00000552620 PAPPA-AS1Q5QFB9 102 aa4.5□□□□□ -1.69
CHMP4A-210ENST00000552620 SCGB3A1Q96QR1 104 aa4.5□□□□□ -1.69
CHMP4A-210ENST00000552620 MRPL35Q9NZE8 188 aaKnown RBP4.5□□□□□ -1.69
CHMP4A-210ENST00000552620 PHLDA3Q9Y5J5 127 aa4.5□□□□□ -1.69
CHMP4A-210ENST00000552620 CFAP47Q6ZTR5 3102 aa4.5□□□□□ -1.69
CHMP4A-210ENST00000552620 ABCA4P78363 2273 aa4.49□□□□□ -1.69
CHMP4A-210ENST00000552620 TTC28Q96AY4 2481 aa4.49□□□□□ -1.69
CHMP4A-210ENST00000552620 ZZEF1O43149 2961 aa4.49□□□□□ -1.69
CHMP4A-210ENST00000552620 IGHV4OR15-8A0A075B7B6 117 aa4.49□□□□□ -1.69
CHMP4A-210ENST00000552620 A0A087WW49 117 aa4.49□□□□□ -1.69
CHMP4A-210ENST00000552620 IGHV3-49A0A0A0MS15 119 aa4.49□□□□□ -1.69
CHMP4A-210ENST00000552620 MYMXA0A1B0GTQ4 84 aa4.49□□□□□ -1.69
CHMP4A-210ENST00000552620 A4D1N5 150 aa4.49□□□□□ -1.69
CHMP4A-210ENST00000552620 E9PLD3 99 aa4.49□□□□□ -1.69
CHMP4A-210ENST00000552620 F8W1H4 67 aa4.49□□□□□ -1.69
CHMP4A-210ENST00000552620 NXPH4O95158 308 aa4.49□□□□□ -1.69
CHMP4A-210ENST00000552620 FXYD2P54710 66 aa4.49□□□□□ -1.69
CHMP4A-210ENST00000552620 C12orf74Q32Q52 190 aa4.49□□□□□ -1.69
CHMP4A-210ENST00000552620 HIST2H2BCQ6DN03 193 aa4.49□□□□□ -1.69
CHMP4A-210ENST00000552620 HIST2H2BDQ6DRA6 164 aa4.49□□□□□ -1.69
CHMP4A-210ENST00000552620 TMEM219Q86XT9 240 aa4.49□□□□□ -1.69
CHMP4A-210ENST00000552620 GPHB5Q86YW7 130 aa4.49□□□□□ -1.69
CHMP4A-210ENST00000552620 MAPKAPK5-AS1Q8N8E1 139 aa4.49□□□□□ -1.69
CHMP4A-210ENST00000552620 NEXN-AS1Q8NBZ9 246 aa4.49□□□□□ -1.69
CHMP4A-210ENST00000552620 PHLDA1Q8WV24 401 aaPredicted RBP4.49□□□□□ -1.69
CHMP4A-210ENST00000552620 RASL10AQ92737 203 aa4.49□□□□□ -1.69
CHMP4A-210ENST00000552620 RAB37Q96AX2 223 aa4.49□□□□□ -1.69
CHMP4A-210ENST00000552620 ODF3Q96PU9 254 aa4.49□□□□□ -1.69
CHMP4A-210ENST00000552620 CITED2Q99967 270 aaPredicted RBP4.49□□□□□ -1.69
CHMP4A-210ENST00000552620 CSTL1Q9H114 145 aa4.49□□□□□ -1.69
CHMP4A-210ENST00000552620 TPRP12270 2363 aaKnown RBP4.49□□□□□ -1.69
CHMP4A-210ENST00000552620 RIF1Q5UIP0 2472 aaKnown RBP4.49□□□□□ -1.69
CHMP4A-210ENST00000552620 ZNF292O60281 2723 aa4.48□□□□□ -1.69
CHMP4A-210ENST00000552620 PTPRQQ9UMZ3 2332 aa4.48□□□□□ -1.69
CHMP4A-210ENST00000552620 TRAV26-2A0A0B4J265 109 aa4.48□□□□□ -1.69
CHMP4A-210ENST00000552620 OR11H12B2RN74 326 aa4.48□□□□□ -1.69
CHMP4A-210ENST00000552620 IGLL5B9A064 214 aa4.48□□□□□ -1.69
CHMP4A-210ENST00000552620 IGHV4-39P01824 125 aa4.48□□□□□ -1.69
CHMP4A-210ENST00000552620 GNLYP22749 145 aa4.48□□□□□ -1.69
CHMP4A-210ENST00000552620 RNASE4P34096 147 aaKnown RBP4.48□□□□□ -1.69
CHMP4A-210ENST00000552620 TCTAP57738 103 aa4.48□□□□□ -1.69
CHMP4A-210ENST00000552620 KRTAP15-1Q3LI76 137 aa4.48□□□□□ -1.69
CHMP4A-210ENST00000552620 PRR9Q5T870 116 aa4.48□□□□□ -1.69
CHMP4A-210ENST00000552620 UNQ9165/PRO28630Q6UXU0 137 aa4.48□□□□□ -1.69
CHMP4A-210ENST00000552620 FOXI2Q6ZQN5 318 aa4.48□□□□□ -1.69
CHMP4A-210ENST00000552620 C14orf178Q8N769 122 aaPredicted RBP4.48□□□□□ -1.69
CHMP4A-210ENST00000552620 OR11H1Q8NG94 326 aa4.48□□□□□ -1.69
CHMP4A-210ENST00000552620 OR11H2Q8NH07 326 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 144.5 ms