RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 hADV29S1A0JD25 119 aa3.96□□□□□ -1.78
LSM3P2-201ENST00000551246 TEX22C9J3V5 150 aa3.96□□□□□ -1.78
LSM3P2-201ENST00000551246 LEPROTO15243 131 aa3.96□□□□□ -1.78
LSM3P2-201ENST00000551246 SCRG1O75711 98 aa3.96□□□□□ -1.78
LSM3P2-201ENST00000551246 TRGV3P03979 118 aa3.96□□□□□ -1.78
LSM3P2-201ENST00000551246 HERVK_113P61574 105 aa3.96□□□□□ -1.78
LSM3P2-201ENST00000551246 MZT1Q08AG7 82 aa3.96□□□□□ -1.78
LSM3P2-201ENST00000551246 FHL2Q14192 279 aa3.96□□□□□ -1.78
LSM3P2-201ENST00000551246 DEFB133Q30KQ1 61 aa3.96□□□□□ -1.78
LSM3P2-201ENST00000551246 ZNF876PQ49A33 203 aa3.96□□□□□ -1.78
LSM3P2-201ENST00000551246 FAM222AQ5U5X8 452 aa3.96□□□□□ -1.78
LSM3P2-201ENST00000551246 SCGB1D4Q6XE38 83 aa3.96□□□□□ -1.78
LSM3P2-201ENST00000551246 PRIMA1Q86XR5 153 aa3.96□□□□□ -1.78
LSM3P2-201ENST00000551246 MUSTN1Q8IVN3 82 aa3.96□□□□□ -1.78
LSM3P2-201ENST00000551246 SERP2Q8N6R1 65 aa3.96□□□□□ -1.78
LSM3P2-201ENST00000551246 LEAP2Q969E1 77 aa3.96□□□□□ -1.78
LSM3P2-201ENST00000551246 TMEM141Q96I45 108 aa3.96□□□□□ -1.78
LSM3P2-201ENST00000551246 DPH3P1Q9H4G8 78 aa3.96□□□□□ -1.78
LSM3P2-201ENST00000551246 C16orf95Q9H693 158 aa3.96□□□□□ -1.78
LSM3P2-201ENST00000551246 C11orf21Q9P2W6 132 aa3.96□□□□□ -1.78
LSM3P2-201ENST00000551246 LINC00527Q9UJ94 153 aa3.96□□□□□ -1.78
LSM3P2-201ENST00000551246 TNCP24821 2201 aa3.95□□□□□ -1.78
LSM3P2-201ENST00000551246 DIDO1Q9BTC0 2240 aaKnown RBP3.95□□□□□ -1.78
LSM3P2-201ENST00000551246 PDE4DIPQ5VU43 2346 aa3.95□□□□□ -1.78
LSM3P2-201ENST00000551246 IGHV4OR15-8A0A075B7B6 117 aa3.95□□□□□ -1.78
LSM3P2-201ENST00000551246 IGHV3OR16-10A0A075B7F0 116 aa3.95□□□□□ -1.78
LSM3P2-201ENST00000551246 A0A087WW49 117 aa3.95□□□□□ -1.78
LSM3P2-201ENST00000551246 F5H697 171 aa3.95□□□□□ -1.78
LSM3P2-201ENST00000551246 J3QQQ9 107 aa3.95□□□□□ -1.78
LSM3P2-201ENST00000551246 K7EIM0 57 aa3.95□□□□□ -1.78
LSM3P2-201ENST00000551246 BUB3O43684 328 aa3.95□□□□□ -1.78
LSM3P2-201ENST00000551246 IGKV3-15P01624 115 aa3.95□□□□□ -1.78
LSM3P2-201ENST00000551246 IGLV1-44P01699 117 aa3.95□□□□□ -1.78
LSM3P2-201ENST00000551246 IGHV3-48P01763 117 aa3.95□□□□□ -1.78
LSM3P2-201ENST00000551246 SUMO2P61956 95 aaKnown RBP3.95□□□□□ -1.78
LSM3P2-201ENST00000551246 RPL18AQ02543 176 aaKnown RBP3.95□□□□□ -1.78
LSM3P2-201ENST00000551246 DUX4L9Q6RFH8 374 aaPredicted RBP3.95□□□□□ -1.78
LSM3P2-201ENST00000551246 C2orf66Q6UXQ4 117 aa3.95□□□□□ -1.78
LSM3P2-201ENST00000551246 ASCL5Q7RTU5 278 aa3.95□□□□□ -1.78
LSM3P2-201ENST00000551246 GPHB5Q86YW7 130 aa3.95□□□□□ -1.78
LSM3P2-201ENST00000551246 LINC00477Q96M19 166 aa3.95□□□□□ -1.78
LSM3P2-201ENST00000551246 TIMM17AQ99595 171 aa3.95□□□□□ -1.78
LSM3P2-201ENST00000551246 TIMM21Q9BVV7 248 aa3.95□□□□□ -1.78
LSM3P2-201ENST00000551246 ICOSQ9Y6W8 199 aa3.95□□□□□ -1.78
LSM3P2-201ENST00000551246 IGHV3-64DA0A0J9YX35 117 aa3.94□□□□□ -1.78
LSM3P2-201ENST00000551246 NBR2O15453 112 aa3.94□□□□□ -1.78
LSM3P2-201ENST00000551246 RS1O15537 224 aa3.94□□□□□ -1.78
LSM3P2-201ENST00000551246 NXPH4O95158 308 aa3.94□□□□□ -1.78
LSM3P2-201ENST00000551246 IGHV4-39P01824 125 aa3.94□□□□□ -1.78
LSM3P2-201ENST00000551246 FOLR3P41439 243 aa3.94□□□□□ -1.78
LSM3P2-201ENST00000551246 UBE2E1P51965 193 aa3.94□□□□□ -1.78
LSM3P2-201ENST00000551246 LYZP61626 148 aa3.94□□□□□ -1.78
LSM3P2-201ENST00000551246 Q0VFX4 171 aa3.94□□□□□ -1.78
LSM3P2-201ENST00000551246 Q6JHZ5 121 aa3.94□□□□□ -1.78
LSM3P2-201ENST00000551246 LINC00336Q6ZUF6 198 aa3.94□□□□□ -1.78
LSM3P2-201ENST00000551246 DEFB132Q7Z7B7 95 aa3.94□□□□□ -1.78
LSM3P2-201ENST00000551246 SLC25A45Q8N413 288 aa3.94□□□□□ -1.78
LSM3P2-201ENST00000551246 RNF152Q8N8N0 203 aa3.94□□□□□ -1.78
LSM3P2-201ENST00000551246 C9orf85Q96MD7 179 aa3.94□□□□□ -1.78
LSM3P2-201ENST00000551246 GAFA1Q96PS6 74 aa3.94□□□□□ -1.78
LSM3P2-201ENST00000551246 SMAD5-AS1Q9Y6J3 95 aa3.94□□□□□ -1.78
LSM3P2-201ENST00000551246 EP400Q96L91 3159 aa3.93□□□□□ -1.78
LSM3P2-201ENST00000551246 GON4LQ3T8J9 2241 aa3.93□□□□□ -1.78
LSM3P2-201ENST00000551246 CABIN1Q9Y6J0 2220 aa3.93□□□□□ -1.78
LSM3P2-201ENST00000551246 IGKV2-40A0A087WW87 121 aaPredicted RBP3.93□□□□□ -1.78
LSM3P2-201ENST00000551246 LY6G6EA0A0G2JKS1 128 aa3.93□□□□□ -1.78
LSM3P2-201ENST00000551246 A0A0J9YXY3 114 aa3.93□□□□□ -1.78
LSM3P2-201ENST00000551246 TIMM17BO60830 172 aa3.93□□□□□ -1.78
LSM3P2-201ENST00000551246 NDUFC2O95298 119 aa3.93□□□□□ -1.78
LSM3P2-201ENST00000551246 IGKV2D-40P01614 121 aaPredicted RBP3.93□□□□□ -1.78
LSM3P2-201ENST00000551246 MAGEA5P43359 124 aa3.93□□□□□ -1.78
LSM3P2-201ENST00000551246 RPL27AP46776 148 aaKnown RBP3.93□□□□□ -1.78
LSM3P2-201ENST00000551246 POLR2KP53803 58 aaKnown RBP3.93□□□□□ -1.78
LSM3P2-201ENST00000551246 LINC00315P59091 139 aa3.93□□□□□ -1.78
LSM3P2-201ENST00000551246 SEC61GP60059 68 aa3.93□□□□□ -1.78
LSM3P2-201ENST00000551246 KLRB1Q12918 225 aa3.93□□□□□ -1.78
LSM3P2-201ENST00000551246 KLK9Q2XQG4 91 aa3.93□□□□□ -1.78
LSM3P2-201ENST00000551246 VMA21Q3ZAQ7 101 aa3.93□□□□□ -1.78
LSM3P2-201ENST00000551246 ZNRF1Q8ND25 227 aa3.93□□□□□ -1.78
LSM3P2-201ENST00000551246 RNF125Q96EQ8 232 aa3.93□□□□□ -1.78
LSM3P2-201ENST00000551246 OBSCN-AS1Q96MR7 158 aa3.93□□□□□ -1.78
LSM3P2-201ENST00000551246 DSCR8Q96T75 97 aa3.93□□□□□ -1.78
LSM3P2-201ENST00000551246 KRTAP4-2Q9BYR5 136 aa3.93□□□□□ -1.78
LSM3P2-201ENST00000551246 KLK9Q9UKQ9 250 aa3.93□□□□□ -1.78
LSM3P2-201ENST00000551246 KIF25-AS1Q9Y6Z4 181 aa3.93□□□□□ -1.78
LSM3P2-201ENST00000551246 U3KQA8 63 aa3.93□□□□□ -1.78
LSM3P2-201ENST00000551246 CACNA1DQ01668 2161 aa3.92□□□□□ -1.78
LSM3P2-201ENST00000551246 TRAV12-2A0A075B6T6 113 aa3.92□□□□□ -1.78
LSM3P2-201ENST00000551246 TRAV13-1A0A0B4J241 112 aa3.92□□□□□ -1.78
LSM3P2-201ENST00000551246 IGHV5-10-1A0A0J9YXX1 117 aa3.92□□□□□ -1.78
LSM3P2-201ENST00000551246 I3L3M4 83 aa3.92□□□□□ -1.78
LSM3P2-201ENST00000551246 NTN3O00634 580 aaPredicted RBP3.92□□□□□ -1.78
LSM3P2-201ENST00000551246 BCE1O60756 84 aa3.92□□□□□ -1.78
LSM3P2-201ENST00000551246 PPP1R17O96001 155 aa3.92□□□□□ -1.78
LSM3P2-201ENST00000551246 IGHV1-69P01742 117 aa3.92□□□□□ -1.78
LSM3P2-201ENST00000551246 IGHV1-2P23083 117 aa3.92□□□□□ -1.78
LSM3P2-201ENST00000551246 PFN2P35080 140 aa3.92□□□□□ -1.78
LSM3P2-201ENST00000551246 HCP5Q6MZN7 132 aa3.92□□□□□ -1.78
LSM3P2-201ENST00000551246 TMEM61Q8N0U2 210 aa3.92□□□□□ -1.78
LSM3P2-201ENST00000551246 MRPL53Q96EL3 112 aaKnown RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms