RNA–Protein interactions for RNA: ENST00000551216.2

SCN8A-207, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-207ENST00000551216 OR2K2Q8NGT1 345 aa10.77□□□□□ -0.68
SCN8A-207ENST00000551216 ZNF747Q9BV97 191 aa10.77□□□□□ -0.68
SCN8A-207ENST00000551216 SONP18583 2426 aaKnown RBP10.77□□□□□ -0.69
SCN8A-207ENST00000551216 NBPF19A0A087WUL8 3843 aa10.76□□□□□ -0.69
SCN8A-207ENST00000551216 CMC4P56277 68 aaPredicted RBP10.76□□□□□ -0.69
SCN8A-207ENST00000551216 CTAG1AP78358 180 aa10.76□□□□□ -0.69
SCN8A-207ENST00000551216 LBHQ53QV2 105 aaPredicted RBP10.76□□□□□ -0.69
SCN8A-207ENST00000551216 MRPL52Q86TS9 123 aaKnown RBP10.76□□□□□ -0.69
SCN8A-207ENST00000551216 Q8N8P6 123 aa10.76□□□□□ -0.69
SCN8A-207ENST00000551216 TRAV9-2A0A087WT02 112 aa10.76□□□□□ -0.69
SCN8A-207ENST00000551216 TRAV12-3A0A0B4J271 114 aa10.76□□□□□ -0.69
SCN8A-207ENST00000551216 LOC389332A0A1B0GUA5 103 aa10.76□□□□□ -0.69
SCN8A-207ENST00000551216 GNRH2O43555 120 aa10.76□□□□□ -0.69
SCN8A-207ENST00000551216 CD28P10747 220 aa10.76□□□□□ -0.69
SCN8A-207ENST00000551216 KIR3DS1Q14943 382 aa10.76□□□□□ -0.69
SCN8A-207ENST00000551216 NRACQ8N912 160 aa10.76□□□□□ -0.69
SCN8A-207ENST00000551216 C20orf78Q9BR46 151 aa10.76□□□□□ -0.69
SCN8A-207ENST00000551216 MIEN1Q9BRT3 115 aa10.76□□□□□ -0.69
SCN8A-207ENST00000551216 SELENOKQ9Y6D0 94 aa10.76□□□□□ -0.69
SCN8A-207ENST00000551216 ZNF469Q96JG9 3925 aaPredicted RBP10.75□□□□□ -0.69
SCN8A-207ENST00000551216 TRGV11A0A075B6L2 103 aa10.75□□□□□ -0.69
SCN8A-207ENST00000551216 IGHV1OR15-1A0A075B7D0 117 aa10.75□□□□□ -0.69
SCN8A-207ENST00000551216 SMKR1H3BMG3 65 aa10.75□□□□□ -0.69
SCN8A-207ENST00000551216 H3BMM0 161 aa10.75□□□□□ -0.69
SCN8A-207ENST00000551216 NCR2O95944 276 aa10.75□□□□□ -0.69
SCN8A-207ENST00000551216 FOSL1P15407 271 aa10.75□□□□□ -0.69
SCN8A-207ENST00000551216 C9orf85Q96MD7 179 aa10.75□□□□□ -0.69
SCN8A-207ENST00000551216 PAM16Q9Y3D7 125 aa10.75□□□□□ -0.69
SCN8A-207ENST00000551216 A0A096LNJ9 63 aa10.74□□□□□ -0.69
SCN8A-207ENST00000551216 CD7P09564 240 aa10.74□□□□□ -0.69
SCN8A-207ENST00000551216 DEFB131AP59861 70 aa10.74□□□□□ -0.69
SCN8A-207ENST00000551216 LINC01545Q5VT33 79 aa10.74□□□□□ -0.69
SCN8A-207ENST00000551216 SYT8Q8NBV8 401 aa10.74□□□□□ -0.69
SCN8A-207ENST00000551216 CITED2Q99967 270 aaPredicted RBP10.74□□□□□ -0.69
SCN8A-207ENST00000551216 IGLV2-18A0A075B6J9 118 aa10.73□□□□□ -0.69
SCN8A-207ENST00000551216 IGHV3-16A0A0C4DH30 117 aa10.73□□□□□ -0.69
SCN8A-207ENST00000551216 FCER1GP30273 86 aa10.73□□□□□ -0.69
SCN8A-207ENST00000551216 CD300EQ496F6 205 aaPredicted RBP10.73□□□□□ -0.69
SCN8A-207ENST00000551216 ZNF705AQ6ZN79 300 aaPredicted RBP10.73□□□□□ -0.69
SCN8A-207ENST00000551216 C14orf144Q96I85 54 aa10.73□□□□□ -0.69
SCN8A-207ENST00000551216 DUX3Q96PT4 197 aa10.73□□□□□ -0.69
SCN8A-207ENST00000551216 LINC00467Q9BRT7 94 aa10.73□□□□□ -0.69
SCN8A-207ENST00000551216 ZNF256Q9Y2P7 627 aaPredicted RBP10.73□□□□□ -0.69
SCN8A-207ENST00000551216 LY6G6DO95868 133 aa10.73□□□□□ -0.69
SCN8A-207ENST00000551216 SMIM17P0DL12 118 aa10.73□□□□□ -0.69
SCN8A-207ENST00000551216 PROK1P58294 105 aa10.73□□□□□ -0.69
SCN8A-207ENST00000551216 RPL32P62910 135 aaKnown RBP10.73□□□□□ -0.69
SCN8A-207ENST00000551216 SPINK13Q1W4C9 94 aa10.73□□□□□ -0.69
SCN8A-207ENST00000551216 SPATA45Q537H7 98 aa10.73□□□□□ -0.69
SCN8A-207ENST00000551216 PIK3CD-AS1Q5SR53 167 aa10.73□□□□□ -0.69
SCN8A-207ENST00000551216 MAP6D1Q9H9H5 199 aa10.73□□□□□ -0.69
SCN8A-207ENST00000551216 TIMM8BQ9Y5J9 83 aaPredicted RBP10.73□□□□□ -0.69
SCN8A-207ENST00000551216 FAM110AQ9BQ89 295 aa10.72□□□□□ -0.69
SCN8A-207ENST00000551216 KIF25-AS1Q9Y6Z4 181 aa10.72□□□□□ -0.69
SCN8A-207ENST00000551216 LINC00173Q6ZV60 143 aa10.71□□□□□ -0.69
SCN8A-207ENST00000551216 Q8N1Y9 231 aa10.71□□□□□ -0.69
SCN8A-207ENST00000551216 PTH2Q96A98 100 aa10.71□□□□□ -0.69
SCN8A-207ENST00000551216 ST20Q9HBF5 79 aa10.71□□□□□ -0.69
SCN8A-207ENST00000551216 UQCR10Q9UDW1 63 aa10.71□□□□□ -0.69
SCN8A-207ENST00000551216 ACANP16112 2415 aa10.71□□□□□ -0.7
SCN8A-207ENST00000551216 LINC01549A6NIU2 74 aa10.7□□□□□ -0.7
SCN8A-207ENST00000551216 HSBP1L1C9JCN9 74 aa10.7□□□□□ -0.7
SCN8A-207ENST00000551216 SUMO2P61956 95 aaKnown RBP10.7□□□□□ -0.7
SCN8A-207ENST00000551216 LAGE3Q14657 143 aa10.7□□□□□ -0.7
SCN8A-207ENST00000551216 LGALS9BQ3B8N2 356 aa10.7□□□□□ -0.7
SCN8A-207ENST00000551216 LGALS9CQ6DKI2 356 aa10.7□□□□□ -0.7
SCN8A-207ENST00000551216 C14orf178Q8N769 122 aaPredicted RBP10.7□□□□□ -0.7
SCN8A-207ENST00000551216 SMIM2Q9BVW6 85 aa10.7□□□□□ -0.7
SCN8A-207ENST00000551216 HIVEP2P31629 2446 aa10.7□□□□□ -0.7
SCN8A-207ENST00000551216 MUC4Q99102 2169 aa10.7□□□□□ -0.7
SCN8A-207ENST00000551216 GCN1Q92616 2671 aaKnown RBP10.7□□□□□ -0.7
SCN8A-207ENST00000551216 TRAV12-2A0A075B6T6 113 aa10.69□□□□□ -0.7
SCN8A-207ENST00000551216 GAS8-AS1O95177 125 aa10.69□□□□□ -0.7
SCN8A-207ENST00000551216 IGKV3-20P01619 116 aa10.69□□□□□ -0.7
SCN8A-207ENST00000551216 IGLC3P0DOY3 106 aa10.69□□□□□ -0.7
SCN8A-207ENST00000551216 G0S2P27469 103 aa10.69□□□□□ -0.7
SCN8A-207ENST00000551216 ORMDL2Q53FV1 153 aa10.69□□□□□ -0.7
SCN8A-207ENST00000551216 IFI27L1Q96BM0 104 aa10.69□□□□□ -0.7
SCN8A-207ENST00000551216 KNCNA6PVL3 124 aa10.69□□□□□ -0.7
SCN8A-207ENST00000551216 ATP5LO75964 103 aa10.69□□□□□ -0.7
SCN8A-207ENST00000551216 LINC00315P59091 139 aa10.69□□□□□ -0.7
SCN8A-207ENST00000551216 RASL10AQ92737 203 aa10.69□□□□□ -0.7
SCN8A-207ENST00000551216 AGRNO00468 2067 aa10.68□□□□□ -0.7
SCN8A-207ENST00000551216 FASNP49327 2511 aaKnown RBP10.68□□□□□ -0.7
SCN8A-207ENST00000551216 A0A1W2PRX2 142 aa10.68□□□□□ -0.7
SCN8A-207ENST00000551216 GATA1P15976 413 aaPredicted RBP10.68□□□□□ -0.7
SCN8A-207ENST00000551216 NDUFA11Q86Y39 141 aa10.68□□□□□ -0.7
SCN8A-207ENST00000551216 TRAV26-2A0A0B4J265 109 aa10.67□□□□□ -0.7
SCN8A-207ENST00000551216 C11orf44Q8N8P7 122 aa10.67□□□□□ -0.7
SCN8A-207ENST00000551216 TRBV6-5A0A0K0K1A5 114 aa10.66□□□□□ -0.7
SCN8A-207ENST00000551216 CBY3A6NI87 242 aa10.66□□□□□ -0.7
SCN8A-207ENST00000551216 ADARB2-AS1A8MUL3 147 aa10.66□□□□□ -0.7
SCN8A-207ENST00000551216 OR11H12B2RN74 326 aa10.66□□□□□ -0.7
SCN8A-207ENST00000551216 INSP01308 110 aa10.66□□□□□ -0.7
SCN8A-207ENST00000551216 SMR3AQ99954 134 aa10.66□□□□□ -0.7
SCN8A-207ENST00000551216 MDFICQ9P1T7 246 aa10.66□□□□□ -0.7
SCN8A-207ENST00000551216 SORL1Q92673 2214 aa10.66□□□□□ -0.7
SCN8A-207ENST00000551216 M0R143 59 aa10.66□□□□□ -0.7
SCN8A-207ENST00000551216 IGLV1-51P01701 117 aa10.66□□□□□ -0.7
SCN8A-207ENST00000551216 MGPP08493 103 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms