RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 F5H768 121 aa9.43□□□□□ -0.9
NUP188-211ENST00000550219 AZU1P20160 251 aa9.43□□□□□ -0.9
NUP188-211ENST00000550219 ADIRFQ15847 76 aa9.43□□□□□ -0.9
NUP188-211ENST00000550219 RNF212Q495C1 297 aa9.43□□□□□ -0.9
NUP188-211ENST00000550219 MUC21Q5SSG8 566 aa9.43□□□□□ -0.9
NUP188-211ENST00000550219 Q6ZR54 194 aa9.43□□□□□ -0.9
NUP188-211ENST00000550219 NUDT10Q8NFP7 164 aa9.43□□□□□ -0.9
NUP188-211ENST00000550219 DAZAP1Q96EP5 407 aaKnown RBP9.43□□□□□ -0.9
NUP188-211ENST00000550219 NUDT11Q96G61 164 aa9.43□□□□□ -0.9
NUP188-211ENST00000550219 KCNS1Q96KK3 526 aa9.43□□□□□ -0.9
NUP188-211ENST00000550219 RNASE7Q9H1E1 156 aaKnown RBP9.43□□□□□ -0.9
NUP188-211ENST00000550219 OSTCQ9NRP0 149 aa9.43□□□□□ -0.9
NUP188-211ENST00000550219 TP53TG3Q9ULZ0 132 aa9.43□□□□□ -0.9
NUP188-211ENST00000550219 DNAH2Q9P225 4427 aa9.42□□□□□ -0.9
NUP188-211ENST00000550219 NUDT3O95989 172 aa9.42□□□□□ -0.9
NUP188-211ENST00000550219 P01737 135 aa9.42□□□□□ -0.9
NUP188-211ENST00000550219 ORM1P02763 201 aa9.42□□□□□ -0.9
NUP188-211ENST00000550219 CXCL1P09341 107 aa9.42□□□□□ -0.9
NUP188-211ENST00000550219 DNLZQ5SXM8 178 aa9.42□□□□□ -0.9
NUP188-211ENST00000550219 ZNF493Q6ZR52 646 aa9.42□□□□□ -0.9
NUP188-211ENST00000550219 PLAC8L1A1L4L8 177 aa9.41□□□□□ -0.9
NUP188-211ENST00000550219 B4DEV8 164 aa9.41□□□□□ -0.9
NUP188-211ENST00000550219 GNRH2O43555 120 aa9.41□□□□□ -0.9
NUP188-211ENST00000550219 TYMSP04818 313 aa9.41□□□□□ -0.9
NUP188-211ENST00000550219 MED14OSP0DP75 135 aa9.41□□□□□ -0.9
NUP188-211ENST00000550219 ERVFC1-1P60608 527 aa9.41□□□□□ -0.9
NUP188-211ENST00000550219 IBA57Q5T440 356 aaKnown RBP9.41□□□□□ -0.9
NUP188-211ENST00000550219 C1orf134Q5TEV5 83 aa9.41□□□□□ -0.9
NUP188-211ENST00000550219 C11orf72Q8NBR9 251 aa9.41□□□□□ -0.9
NUP188-211ENST00000550219 RNASE8Q8TDE3 154 aaKnown RBP9.41□□□□□ -0.9
NUP188-211ENST00000550219 TMEM263Q8WUH6 116 aaKnown RBP9.41□□□□□ -0.9
NUP188-211ENST00000550219 SFRP2Q96HF1 295 aa9.41□□□□□ -0.9
NUP188-211ENST00000550219 NAGKQ9UJ70 344 aa9.41□□□□□ -0.9
NUP188-211ENST00000550219 KIAA1109Q2LD37 5005 aa9.4□□□□□ -0.9
NUP188-211ENST00000550219 TRGV11A0A075B6L2 103 aa9.4□□□□□ -0.9
NUP188-211ENST00000550219 IGHV3-16A0A0C4DH30 117 aa9.4□□□□□ -0.9
NUP188-211ENST00000550219 CBY3A6NI87 242 aa9.4□□□□□ -0.9
NUP188-211ENST00000550219 M0R036 132 aa9.4□□□□□ -0.9
NUP188-211ENST00000550219 ATP5G1P05496 136 aa9.4□□□□□ -0.9
NUP188-211ENST00000550219 RPL19P84098 196 aaKnown RBP9.4□□□□□ -0.9
NUP188-211ENST00000550219 CT83Q5H943 113 aa9.4□□□□□ -0.9
NUP188-211ENST00000550219 OR2D3Q8NGH3 330 aa9.4□□□□□ -0.9
NUP188-211ENST00000550219 C16orf74Q96GX8 76 aa9.4□□□□□ -0.9
NUP188-211ENST00000550219 V9GYV3 84 aa9.4□□□□□ -0.9
NUP188-211ENST00000550219 NACAE9PAV3 2078 aa9.4□□□□□ -0.91
NUP188-211ENST00000550219 GATCO43716 136 aaKnown RBP9.39□□□□□ -0.91
NUP188-211ENST00000550219 RPS20P60866 119 aaKnown RBP9.39□□□□□ -0.91
NUP188-211ENST00000550219 C15orf54Q8N8G6 183 aa9.39□□□□□ -0.91
NUP188-211ENST00000550219 OR10G8Q8NGN5 311 aa9.39□□□□□ -0.91
NUP188-211ENST00000550219 RPP21Q9H633 154 aaKnown RBP9.39□□□□□ -0.91
NUP188-211ENST00000550219 NOP10Q9NPE3 64 aaKnown RBP9.39□□□□□ -0.91
NUP188-211ENST00000550219 MDFICQ9P1T7 246 aa9.39□□□□□ -0.91
NUP188-211ENST00000550219 TMSB15BA0A087X1C1 80 aa9.38□□□□□ -0.91
NUP188-211ENST00000550219 RNASE3P12724 160 aaKnown RBP9.38□□□□□ -0.91
NUP188-211ENST00000550219 TCL1AP56279 114 aa9.38□□□□□ -0.91
NUP188-211ENST00000550219 DAZ2Q13117 558 aaKnown RBP9.38□□□□□ -0.91
NUP188-211ENST00000550219 C9orf85Q96MD7 179 aa9.38□□□□□ -0.91
NUP188-211ENST00000550219 SCRT2Q9NQ03 307 aa9.38□□□□□ -0.91
NUP188-211ENST00000550219 GSN-AS1Q9NRJ2 163 aa9.38□□□□□ -0.91
NUP188-211ENST00000550219 TIMM8BQ9Y5J9 83 aaPredicted RBP9.38□□□□□ -0.91
NUP188-211ENST00000550219 DNAH17Q9UFH2 4485 aa9.38□□□□□ -0.91
NUP188-211ENST00000550219 XKRY2A2RUG3 117 aa9.37□□□□□ -0.91
NUP188-211ENST00000550219 GRIFINA4D1Z8 144 aa9.37□□□□□ -0.91
NUP188-211ENST00000550219 PPP1R2P9O14990 202 aa9.37□□□□□ -0.91
NUP188-211ENST00000550219 ASIPP42127 132 aa9.37□□□□□ -0.91
NUP188-211ENST00000550219 FOXA3P55318 350 aaPredicted RBP9.37□□□□□ -0.91
NUP188-211ENST00000550219 FAM3BP58499 235 aaPredicted RBP9.37□□□□□ -0.91
NUP188-211ENST00000550219 ZNF415Q09FC8 603 aa9.37□□□□□ -0.91
NUP188-211ENST00000550219 CLRN3Q8NCR9 226 aa9.37□□□□□ -0.91
NUP188-211ENST00000550219 ANAPC16Q96DE5 110 aa9.37□□□□□ -0.91
NUP188-211ENST00000550219 SSBP4Q9BWG4 385 aaPredicted RBP9.37□□□□□ -0.91
NUP188-211ENST00000550219 IL36BQ9NZH7 164 aa9.37□□□□□ -0.91
NUP188-211ENST00000550219 PKHD1P08F94 4074 aa9.37□□□□□ -0.91
NUP188-211ENST00000550219 NBDYA0A0U1RRE5 68 aa9.36□□□□□ -0.91
NUP188-211ENST00000550219 FAM231BA6NCW3 169 aa9.36□□□□□ -0.91
NUP188-211ENST00000550219 A8MWL6 223 aa9.36□□□□□ -0.91
NUP188-211ENST00000550219 SNAI2O43623 268 aa9.36□□□□□ -0.91
NUP188-211ENST00000550219 APOC3P02656 99 aa9.36□□□□□ -0.91
NUP188-211ENST00000550219 MT-ND4LP03901 98 aa9.36□□□□□ -0.91
NUP188-211ENST00000550219 IGLC6P0CF74 106 aa9.36□□□□□ -0.91
NUP188-211ENST00000550219 CCL18P55774 89 aa9.36□□□□□ -0.91
NUP188-211ENST00000550219 SVBPQ8N300 66 aa9.36□□□□□ -0.91
NUP188-211ENST00000550219 ZNRF2Q8NHG8 242 aa9.36□□□□□ -0.91
NUP188-211ENST00000550219 TSKUQ8WUA8 353 aa9.36□□□□□ -0.91
NUP188-211ENST00000550219 PTH2Q96A98 100 aa9.36□□□□□ -0.91
NUP188-211ENST00000550219 SPXQ9BT56 116 aa9.36□□□□□ -0.91
NUP188-211ENST00000550219 GFRA4Q9GZZ7 299 aa9.36□□□□□ -0.91
NUP188-211ENST00000550219 DYNC1H1Q14204 4646 aaKnown RBP9.35□□□□□ -0.91
NUP188-211ENST00000550219 A0A1W2PPQ1 181 aa9.35□□□□□ -0.91
NUP188-211ENST00000550219 GAGE12BA1L429 117 aa9.35□□□□□ -0.91
NUP188-211ENST00000550219 SPINK4O60575 86 aa9.35□□□□□ -0.91
NUP188-211ENST00000550219 GAGE7O76087 117 aa9.35□□□□□ -0.91
NUP188-211ENST00000550219 OR5AL1P0C617 328 aa9.35□□□□□ -0.91
NUP188-211ENST00000550219 ARMS2P0C7Q2 107 aa9.35□□□□□ -0.91
NUP188-211ENST00000550219 GAGE12FP0CL80 117 aa9.35□□□□□ -0.91
NUP188-211ENST00000550219 GAGE12GP0CL81 117 aa9.35□□□□□ -0.91
NUP188-211ENST00000550219 GAGE12IP0CL82 117 aa9.35□□□□□ -0.91
NUP188-211ENST00000550219 GZMBP10144 247 aa9.35□□□□□ -0.91
NUP188-211ENST00000550219 S100A4P26447 101 aaKnown RBP9.35□□□□□ -0.91
NUP188-211ENST00000550219 TNP2Q05952 138 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms