RNA–Protein interactions for RNA: ENST00000549766.5

TGFBR1-207, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 5

Gene TGFBR1, Length 1,678 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-207ENST00000549766 RBMY1A1P0DJD3 496 aaKnown RBP18.06■□□□□ 0.48
TGFBR1-207ENST00000549766 RBMY1CP0DJD4 496 aa18.06■□□□□ 0.48
TGFBR1-207ENST00000549766 FXYD7P58549 80 aa18.06■□□□□ 0.48
TGFBR1-207ENST00000549766 RBMY1FQ15415 496 aaKnown RBP18.06■□□□□ 0.48
TGFBR1-207ENST00000549766 NXPH4O95158 308 aa18.06■□□□□ 0.48
TGFBR1-207ENST00000549766 RAB4AP20338 218 aa18.06■□□□□ 0.48
TGFBR1-207ENST00000549766 C19orf73Q9NVV2 129 aa18.06■□□□□ 0.48
TGFBR1-207ENST00000549766 CD7P09564 240 aa18.05■□□□□ 0.48
TGFBR1-207ENST00000549766 TRPT1Q86TN4 253 aaKnown RBP18.05■□□□□ 0.48
TGFBR1-207ENST00000549766 IGHV3-16A0A0C4DH30 117 aa18.04■□□□□ 0.48
TGFBR1-207ENST00000549766 SMIM6P0DI80 62 aa18.04■□□□□ 0.48
TGFBR1-207ENST00000549766 URB1-AS1Q96HZ7 61 aa18.04■□□□□ 0.48
TGFBR1-207ENST00000549766 PHLDA3Q9Y5J5 127 aa18.04■□□□□ 0.48
TGFBR1-207ENST00000549766 TIMM8BQ9Y5J9 83 aaPredicted RBP18.04■□□□□ 0.48
TGFBR1-207ENST00000549766 D6R8Y8 96 aa18.03■□□□□ 0.48
TGFBR1-207ENST00000549766 EVI2AP22794 236 aa18.03■□□□□ 0.48
TGFBR1-207ENST00000549766 STHQ8IWL8 128 aa18.03■□□□□ 0.48
TGFBR1-207ENST00000549766 ORMDL3Q8N138 153 aa18.03■□□□□ 0.48
TGFBR1-207ENST00000549766 Q8N1Y9 231 aa18.03■□□□□ 0.48
TGFBR1-207ENST00000549766 C9orf85Q96MD7 179 aa18.03■□□□□ 0.48
TGFBR1-207ENST00000549766 SPRY2O43597 315 aa18.02■□□□□ 0.47
TGFBR1-207ENST00000549766 INSL3P51460 131 aa18.02■□□□□ 0.47
TGFBR1-207ENST00000549766 SMIM15Q7Z3B0 74 aa18.02■□□□□ 0.47
TGFBR1-207ENST00000549766 C20orf144Q9BQM9 153 aa18.02■□□□□ 0.47
TGFBR1-207ENST00000549766 NIT1Q86X76 327 aa18.01■□□□□ 0.47
TGFBR1-207ENST00000549766 SPATA3Q8NHX4 192 aa18.01■□□□□ 0.47
TGFBR1-207ENST00000549766 M0R381 172 aa18■□□□□ 0.47
TGFBR1-207ENST00000549766 PPBPP02775 128 aa18■□□□□ 0.47
TGFBR1-207ENST00000549766 PRELID3AQ96N28 172 aa18■□□□□ 0.47
TGFBR1-207ENST00000549766 KRTAP24-1Q3LI83 254 aa17.99■□□□□ 0.47
TGFBR1-207ENST00000549766 PYY3Q5JQD4 70 aa17.99■□□□□ 0.47
TGFBR1-207ENST00000549766 LINC00467Q9BRT7 94 aa17.99■□□□□ 0.47
TGFBR1-207ENST00000549766 MDFICQ9P1T7 246 aa17.99■□□□□ 0.47
TGFBR1-207ENST00000549766 CKS2P33552 79 aa17.99■□□□□ 0.47
TGFBR1-207ENST00000549766 C12orf57Q99622 126 aa17.99■□□□□ 0.47
TGFBR1-207ENST00000549766 TRGV11A0A075B6L2 103 aa17.98■□□□□ 0.47
TGFBR1-207ENST00000549766 C9orf66Q5T8R8 295 aa17.98■□□□□ 0.47
TGFBR1-207ENST00000549766 CHCHD1Q96BP2 118 aaKnown RBP17.98■□□□□ 0.47
TGFBR1-207ENST00000549766 SAMD10Q9BYL1 202 aa17.98■□□□□ 0.47
TGFBR1-207ENST00000549766 NIPBLQ6KC79 2804 aaeCLIP17.97■□□□□ 0.47
TGFBR1-207ENST00000549766 SMKR1H3BMG3 65 aa17.96■□□□□ 0.47
TGFBR1-207ENST00000549766 INSP01308 110 aa17.96■□□□□ 0.47
TGFBR1-207ENST00000549766 LINC00614P0C842 121 aa17.96■□□□□ 0.47
TGFBR1-207ENST00000549766 RNASEKQ6P5S7 137 aaKnown RBP17.96■□□□□ 0.47
TGFBR1-207ENST00000549766 LAMTOR2Q9Y2Q5 125 aa17.96■□□□□ 0.47
TGFBR1-207ENST00000549766 AMTP48728 403 aa17.96■□□□□ 0.47
TGFBR1-207ENST00000549766 MUC4Q99102 2169 aa17.95■□□□□ 0.46
TGFBR1-207ENST00000549766 HSBP1O75506 76 aa17.95■□□□□ 0.46
TGFBR1-207ENST00000549766 GAS8-AS1O95177 125 aa17.95■□□□□ 0.46
TGFBR1-207ENST00000549766 NCR2O95944 276 aa17.95■□□□□ 0.46
TGFBR1-207ENST00000549766 NPYP01303 97 aa17.95■□□□□ 0.46
TGFBR1-207ENST00000549766 DPH3P1Q9H4G8 78 aa17.95■□□□□ 0.46
TGFBR1-207ENST00000549766 CBY3A6NI87 242 aa17.94■□□□□ 0.46
TGFBR1-207ENST00000549766 NUTF2P61970 127 aaKnown RBP17.94■□□□□ 0.46
TGFBR1-207ENST00000549766 WFDC9Q8NEX5 89 aa17.94■□□□□ 0.46
TGFBR1-207ENST00000549766 AP1S3Q96PC3 154 aa17.94■□□□□ 0.46
TGFBR1-207ENST00000549766 WFDC10AQ9H1F0 79 aa17.94■□□□□ 0.46
TGFBR1-207ENST00000549766 KIF25-AS1Q9Y6Z4 181 aa17.94■□□□□ 0.46
TGFBR1-207ENST00000549766 JMJD1CQ15652 2540 aa17.93■□□□□ 0.46
TGFBR1-207ENST00000549766 PMCHP20382 165 aa17.93■□□□□ 0.46
TGFBR1-207ENST00000549766 JOSD1Q15040 202 aaPredicted RBP17.93■□□□□ 0.46
TGFBR1-207ENST00000549766 FAM19A2Q8N3H0 131 aa17.93■□□□□ 0.46
TGFBR1-207ENST00000549766 POM121L12Q8N7R1 296 aa17.93■□□□□ 0.46
TGFBR1-207ENST00000549766 Q6ZWC4 215 aa17.93■□□□□ 0.46
TGFBR1-207ENST00000549766 C14orf178Q8N769 122 aaPredicted RBP17.93■□□□□ 0.46
TGFBR1-207ENST00000549766 XCL2Q9UBD3 114 aa17.93■□□□□ 0.46
TGFBR1-207ENST00000549766 TENM1Q9UKZ4 2725 aa17.92■□□□□ 0.46
TGFBR1-207ENST00000549766 MRAP2Q96G30 205 aa17.92■□□□□ 0.46
TGFBR1-207ENST00000549766 C1orf158Q8N1D5 194 aa17.91■□□□□ 0.46
TGFBR1-207ENST00000549766 ZNF747Q9BV97 191 aa17.91■□□□□ 0.46
TGFBR1-207ENST00000549766 TNFRSF6BO95407 300 aa17.9■□□□□ 0.46
TGFBR1-207ENST00000549766 GIG44P09565 113 aaPredicted RBP17.9■□□□□ 0.46
TGFBR1-207ENST00000549766 IFI27P40305 119 aaPredicted RBP17.9■□□□□ 0.46
TGFBR1-207ENST00000549766 LINC00315P59091 139 aa17.9■□□□□ 0.46
TGFBR1-207ENST00000549766 PRIMA1Q86XR5 153 aa17.9■□□□□ 0.46
TGFBR1-207ENST00000549766 PRSS3P2Q8NHM4 247 aa17.9■□□□□ 0.46
TGFBR1-207ENST00000549766 LINC01587Q99440 93 aa17.9■□□□□ 0.46
TGFBR1-207ENST00000549766 MCRIP2Q9BUT9 160 aaKnown RBP17.9■□□□□ 0.46
TGFBR1-207ENST00000549766 GATA1P15976 413 aaPredicted RBP17.9■□□□□ 0.46
TGFBR1-207ENST00000549766 DEFB125Q8N687 156 aa17.9■□□□□ 0.46
TGFBR1-207ENST00000549766 NRACQ8N912 160 aa17.9■□□□□ 0.46
TGFBR1-207ENST00000549766 SYT8Q8NBV8 401 aa17.9■□□□□ 0.46
TGFBR1-207ENST00000549766 GSN-AS1Q9NRJ2 163 aa17.9■□□□□ 0.46
TGFBR1-207ENST00000549766 PRSS47A8MTI9 375 aa17.89■□□□□ 0.45
TGFBR1-207ENST00000549766 TRAV26-2A0A0B4J265 109 aa17.88■□□□□ 0.45
TGFBR1-207ENST00000549766 IGHV1-24A0A0C4DH33 117 aa17.88■□□□□ 0.45
TGFBR1-207ENST00000549766 C11orf72Q8NBR9 251 aa17.88■□□□□ 0.45
TGFBR1-207ENST00000549766 JPT2Q9H910 190 aa17.88■□□□□ 0.45
TGFBR1-207ENST00000549766 AP5S1Q9NUS5 200 aa17.88■□□□□ 0.45
TGFBR1-207ENST00000549766 LOC389332A0A1B0GUA5 103 aa17.87■□□□□ 0.45
TGFBR1-207ENST00000549766 PRM2P04554 102 aa17.87■□□□□ 0.45
TGFBR1-207ENST00000549766 HTN1P15515 57 aa17.87■□□□□ 0.45
TGFBR1-207ENST00000549766 FA2HQ7L5A8 372 aa17.87■□□□□ 0.45
TGFBR1-207ENST00000549766 MAP1LC3AQ9H492 121 aa17.87■□□□□ 0.45
TGFBR1-207ENST00000549766 WIPF1O43516 503 aa17.87■□□□□ 0.45
TGFBR1-207ENST00000549766 PTH2Q96A98 100 aa17.87■□□□□ 0.45
TGFBR1-207ENST00000549766 ATRQ13535 2644 aa17.86■□□□□ 0.45
TGFBR1-207ENST00000549766 LINC01546A6NGU7 62 aa17.86■□□□□ 0.45
TGFBR1-207ENST00000549766 ZNF415Q09FC8 603 aa17.86■□□□□ 0.45
TGFBR1-207ENST00000549766 CDPF1Q6NVV7 123 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms