RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 NHLRC2Q8NBF2 726 aa12.67□□□□□ -0.38
CHMP1A-207ENST00000549328 TCEAL7Q9BRU2 100 aa12.67□□□□□ -0.38
CHMP1A-207ENST00000549328 PRADC1Q9BSG0 188 aa12.67□□□□□ -0.38
CHMP1A-207ENST00000549328 ZFP30Q9Y2G7 519 aa12.67□□□□□ -0.38
CHMP1A-207ENST00000549328 KRTAP10-2P60368 255 aa12.66□□□□□ -0.38
CHMP1A-207ENST00000549328 RHOHQ15669 191 aa12.66□□□□□ -0.38
CHMP1A-207ENST00000549328 Q86TA4 180 aa12.66□□□□□ -0.38
CHMP1A-207ENST00000549328 BOLA1Q9Y3E2 137 aa12.66□□□□□ -0.38
CHMP1A-207ENST00000549328 HMSDA8MTL9 139 aa12.65□□□□□ -0.38
CHMP1A-207ENST00000549328 SMLR1H3BR10 107 aa12.65□□□□□ -0.38
CHMP1A-207ENST00000549328 SEC11BP0C7V7 166 aa12.65□□□□□ -0.38
CHMP1A-207ENST00000549328 MGST1P10620 155 aaKnown RBP12.65□□□□□ -0.38
CHMP1A-207ENST00000549328 S100A4P26447 101 aaKnown RBP12.65□□□□□ -0.38
CHMP1A-207ENST00000549328 C10orf126Q8N4M7 172 aa12.65□□□□□ -0.38
CHMP1A-207ENST00000549328 FMC1Q96HJ9 113 aa12.65□□□□□ -0.38
CHMP1A-207ENST00000549328 TNFRSF18Q9Y5U5 241 aa12.65□□□□□ -0.38
CHMP1A-207ENST00000549328 EREGO14944 169 aa12.64□□□□□ -0.39
CHMP1A-207ENST00000549328 ASIPP42127 132 aa12.64□□□□□ -0.39
CHMP1A-207ENST00000549328 ZFP2Q6ZN57 461 aa12.64□□□□□ -0.39
CHMP1A-207ENST00000549328 IL36BQ9NZH7 164 aa12.64□□□□□ -0.39
CHMP1A-207ENST00000549328 MSRB1Q9NZV6 116 aa12.64□□□□□ -0.39
CHMP1A-207ENST00000549328 A0A0D9SG52 128 aa12.63□□□□□ -0.39
CHMP1A-207ENST00000549328 TRBV6-1A0A0K0K1D8 114 aa12.63□□□□□ -0.39
CHMP1A-207ENST00000549328 A8MWV9 139 aa12.63□□□□□ -0.39
CHMP1A-207ENST00000549328 UMAD1C9J7I0 102 aa12.63□□□□□ -0.39
CHMP1A-207ENST00000549328 CRIP1P50238 77 aa12.63□□□□□ -0.39
CHMP1A-207ENST00000549328 ERVFC1-1P60608 527 aa12.63□□□□□ -0.39
CHMP1A-207ENST00000549328 UBE2G1P62253 170 aa12.63□□□□□ -0.39
CHMP1A-207ENST00000549328 DNLZQ5SXM8 178 aa12.63□□□□□ -0.39
CHMP1A-207ENST00000549328 PGPEP1Q9NXJ5 209 aa12.63□□□□□ -0.39
CHMP1A-207ENST00000549328 IGHV3-73A0A0B4J1V6 119 aa12.62□□□□□ -0.39
CHMP1A-207ENST00000549328 IGHV3-38A0A0C4DH36 116 aa12.62□□□□□ -0.39
CHMP1A-207ENST00000549328 B4DEV8 164 aa12.62□□□□□ -0.39
CHMP1A-207ENST00000549328 CRYGDP07320 174 aa12.62□□□□□ -0.39
CHMP1A-207ENST00000549328 CST9LP1Q5W188 147 aa12.62□□□□□ -0.39
CHMP1A-207ENST00000549328 OR11H4Q8NGC9 324 aa12.62□□□□□ -0.39
CHMP1A-207ENST00000549328 MBD3L1Q8WWY6 194 aa12.62□□□□□ -0.39
CHMP1A-207ENST00000549328 ZC2HC1AQ96GY0 325 aa12.62□□□□□ -0.39
CHMP1A-207ENST00000549328 TRAV8-6A0A0B4J262 113 aa12.61□□□□□ -0.39
CHMP1A-207ENST00000549328 KRBOX1C9JBD0 128 aa12.61□□□□□ -0.39
CHMP1A-207ENST00000549328 FAM162BQ5T6X4 162 aa12.61□□□□□ -0.39
CHMP1A-207ENST00000549328 PARLQ9H300 379 aa12.61□□□□□ -0.39
CHMP1A-207ENST00000549328 LRP1BQ9NZR2 4599 aa12.61□□□□□ -0.39
CHMP1A-207ENST00000549328 SH2D1AO60880 128 aa12.6□□□□□ -0.39
CHMP1A-207ENST00000549328 LTAP01374 205 aa12.6□□□□□ -0.39
CHMP1A-207ENST00000549328 ZNF674Q2M3X9 581 aa12.6□□□□□ -0.39
CHMP1A-207ENST00000549328 LGALSLQ3ZCW2 172 aaPredicted RBP12.6□□□□□ -0.39
CHMP1A-207ENST00000549328 LINC01556Q5JQF7 62 aa12.6□□□□□ -0.39
CHMP1A-207ENST00000549328 SFT2D1Q8WV19 159 aa12.6□□□□□ -0.39
CHMP1A-207ENST00000549328 KANTRA0A1W2PQU2 76 aa12.59□□□□□ -0.39
CHMP1A-207ENST00000549328 BCL2L11O43521 198 aa12.59□□□□□ -0.39
CHMP1A-207ENST00000549328 PAGE4O60829 102 aa12.59□□□□□ -0.39
CHMP1A-207ENST00000549328 EIF5AP63241 154 aaKnown RBP12.59□□□□□ -0.39
CHMP1A-207ENST00000549328 LELP1Q5T871 98 aa12.59□□□□□ -0.39
CHMP1A-207ENST00000549328 CDPF1Q6NVV7 123 aa12.59□□□□□ -0.39
CHMP1A-207ENST00000549328 ATP6V0E2Q8NHE4 81 aa12.59□□□□□ -0.39
CHMP1A-207ENST00000549328 FAM213BQ8TBF2 198 aa12.59□□□□□ -0.39
CHMP1A-207ENST00000549328 ZNF471Q9BX82 626 aaPredicted RBP12.59□□□□□ -0.39
CHMP1A-207ENST00000549328 GTSF1LQ9H1H1 148 aa12.59□□□□□ -0.39
CHMP1A-207ENST00000549328 RYR1P21817 5038 aa12.58□□□□□ -0.4
CHMP1A-207ENST00000549328 A0A087WTM6 91 aa12.58□□□□□ -0.4
CHMP1A-207ENST00000549328 H3BVH4 76 aa12.58□□□□□ -0.4
CHMP1A-207ENST00000549328 M0R036 132 aa12.58□□□□□ -0.4
CHMP1A-207ENST00000549328 S100A9P06702 114 aaKnown RBP12.58□□□□□ -0.4
CHMP1A-207ENST00000549328 ARMS2P0C7Q2 107 aa12.58□□□□□ -0.4
CHMP1A-207ENST00000549328 OR10J3Q5JRS4 329 aa12.58□□□□□ -0.4
CHMP1A-207ENST00000549328 DMRTA1Q5VZB9 504 aa12.58□□□□□ -0.4
CHMP1A-207ENST00000549328 Q6ZSN1 163 aa12.58□□□□□ -0.4
CHMP1A-207ENST00000549328 SYT8Q8NBV8 401 aa12.58□□□□□ -0.4
CHMP1A-207ENST00000549328 AKR1C3P42330 323 aa12.57□□□□□ -0.4
CHMP1A-207ENST00000549328 LINC01559Q495D7 138 aa12.57□□□□□ -0.4
CHMP1A-207ENST00000549328 UFSP1Q6NVU6 142 aa12.57□□□□□ -0.4
CHMP1A-207ENST00000549328 KRTAP4-5Q9BYR2 181 aa12.57□□□□□ -0.4
CHMP1A-207ENST00000549328 SCRT2Q9NQ03 307 aa12.57□□□□□ -0.4
CHMP1A-207ENST00000549328 HSPG2P98160 4391 aa12.57□□□□□ -0.4
CHMP1A-207ENST00000549328 PCLOQ9Y6V0 5065 aa12.57□□□□□ -0.4
CHMP1A-207ENST00000549328 IBA57-AS1B1ANH7 110 aa12.56□□□□□ -0.4
CHMP1A-207ENST00000549328 RHODO00212 210 aa12.56□□□□□ -0.4
CHMP1A-207ENST00000549328 MAPKAPK5-AS1Q8N8E1 139 aa12.56□□□□□ -0.4
CHMP1A-207ENST00000549328 JPT2Q9H910 190 aa12.56□□□□□ -0.4
CHMP1A-207ENST00000549328 GRIFINA4D1Z8 144 aa12.55□□□□□ -0.4
CHMP1A-207ENST00000549328 H2AFB1P0C5Y9 115 aa12.55□□□□□ -0.4
CHMP1A-207ENST00000549328 SAMD10Q9BYL1 202 aa12.55□□□□□ -0.4
CHMP1A-207ENST00000549328 PHLDA3Q9Y5J5 127 aa12.55□□□□□ -0.4
CHMP1A-207ENST00000549328 LINC00694P0DN24 101 aa12.54□□□□□ -0.4
CHMP1A-207ENST00000549328 TPT1P13693 172 aaKnown RBP12.54□□□□□ -0.4
CHMP1A-207ENST00000549328 PFDN1O60925 122 aa12.53□□□□□ -0.4
CHMP1A-207ENST00000549328 TMUB2Q71RG4 321 aa12.53□□□□□ -0.4
CHMP1A-207ENST00000549328 Q8N1X5 172 aa12.53□□□□□ -0.4
CHMP1A-207ENST00000549328 SFRP2Q96HF1 295 aa12.53□□□□□ -0.4
CHMP1A-207ENST00000549328 A0A087WWC5 75 aa12.52□□□□□ -0.41
CHMP1A-207ENST00000549328 A0A1B0GV50 99 aa12.52□□□□□ -0.41
CHMP1A-207ENST00000549328 GAGE12JA6NER3 117 aa12.52□□□□□ -0.41
CHMP1A-207ENST00000549328 GAGE1Q13065 139 aa12.52□□□□□ -0.41
CHMP1A-207ENST00000549328 GAGE4Q13068 117 aa12.52□□□□□ -0.41
CHMP1A-207ENST00000549328 GAGE5Q13069 117 aa12.52□□□□□ -0.41
CHMP1A-207ENST00000549328 GAGE13Q4V321 117 aa12.52□□□□□ -0.41
CHMP1A-207ENST00000549328 MLST8Q9BVC4 326 aa12.52□□□□□ -0.41
CHMP1A-207ENST00000549328 TMSB15BA0A087X1C1 80 aa12.51□□□□□ -0.41
CHMP1A-207ENST00000549328 SCO2A0A1W2PP80 73 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms