RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 NUDT11Q96G61 164 aa3.56□□□□□ -1.84
APP-217ENST00000548570 C9orf85Q96MD7 179 aa3.56□□□□□ -1.84
APP-217ENST00000548570 SMIM7Q9BQ49 75 aa3.56□□□□□ -1.84
APP-217ENST00000548570 PYGO2Q9BRQ0 406 aa3.56□□□□□ -1.84
APP-217ENST00000548570 NIPSNAP3BQ9BS92 247 aa3.56□□□□□ -1.84
APP-217ENST00000548570 RNASE7Q9H1E1 156 aaKnown RBP3.56□□□□□ -1.84
APP-217ENST00000548570 SCRT2Q9NQ03 307 aa3.56□□□□□ -1.84
APP-217ENST00000548570 GOLT1BQ9Y3E0 138 aa3.56□□□□□ -1.84
APP-217ENST00000548570 LY96Q9Y6Y9 160 aa3.56□□□□□ -1.84
APP-217ENST00000548570 TMSB15BA0A087X1C1 80 aa3.55□□□□□ -1.84
APP-217ENST00000548570 SMIM9A6NGZ8 99 aa3.55□□□□□ -1.84
APP-217ENST00000548570 FABP5P3A8MUU1 101 aa3.55□□□□□ -1.84
APP-217ENST00000548570 CIDEAO60543 219 aa3.55□□□□□ -1.84
APP-217ENST00000548570 IGLC6P0CF74 106 aa3.55□□□□□ -1.84
APP-217ENST00000548570 NHLRC4P0CG21 123 aaPredicted RBP3.55□□□□□ -1.84
APP-217ENST00000548570 GZMBP10144 247 aa3.55□□□□□ -1.84
APP-217ENST00000548570 MGST1P10620 155 aaKnown RBP3.55□□□□□ -1.84
APP-217ENST00000548570 MIFP14174 115 aa3.55□□□□□ -1.84
APP-217ENST00000548570 HTN1P15515 57 aa3.55□□□□□ -1.84
APP-217ENST00000548570 TCL1AP56279 114 aa3.55□□□□□ -1.84
APP-217ENST00000548570 TMEM241Q24JQ0 296 aa3.55□□□□□ -1.84
APP-217ENST00000548570 C12orf74Q32Q52 190 aa3.55□□□□□ -1.84
APP-217ENST00000548570 SOHLH1Q5JUK2 328 aa3.55□□□□□ -1.84
APP-217ENST00000548570 DNLZQ5SXM8 178 aa3.55□□□□□ -1.84
APP-217ENST00000548570 FAM162BQ5T6X4 162 aa3.55□□□□□ -1.84
APP-217ENST00000548570 FAM231DQ6ZW35 169 aa3.55□□□□□ -1.84
APP-217ENST00000548570 TMEM256Q8N2U0 113 aa3.55□□□□□ -1.84
APP-217ENST00000548570 POM121L12Q8N7R1 296 aa3.55□□□□□ -1.84
APP-217ENST00000548570 TMEM263Q8WUH6 116 aaKnown RBP3.55□□□□□ -1.84
APP-217ENST00000548570 SMIM12Q96EX1 92 aa3.55□□□□□ -1.84
APP-217ENST00000548570 NDFIP1Q9BT67 221 aa3.55□□□□□ -1.84
APP-217ENST00000548570 C11orf68Q9H3H3 251 aaKnown RBP3.55□□□□□ -1.84
APP-217ENST00000548570 GSN-AS1Q9NRJ2 163 aa3.55□□□□□ -1.84
APP-217ENST00000548570 DKK2Q9UBU2 259 aa3.55□□□□□ -1.84
APP-217ENST00000548570 NAT8Q9UHE5 227 aa3.55□□□□□ -1.84
APP-217ENST00000548570 NAGKQ9UJ70 344 aa3.55□□□□□ -1.84
APP-217ENST00000548570 CARHSP1Q9Y2V2 147 aaKnown RBP3.55□□□□□ -1.84
APP-217ENST00000548570 V9GYV3 84 aa3.55□□□□□ -1.84
APP-217ENST00000548570 F8WDY8 70 aa3.54□□□□□ -1.84
APP-217ENST00000548570 SNAI2O43623 268 aa3.54□□□□□ -1.84
APP-217ENST00000548570 SPINK4O60575 86 aa3.54□□□□□ -1.84
APP-217ENST00000548570 ARMS2P0C7Q2 107 aa3.54□□□□□ -1.84
APP-217ENST00000548570 GYPEP15421 78 aa3.54□□□□□ -1.84
APP-217ENST00000548570 EMP1P54849 157 aa3.54□□□□□ -1.84
APP-217ENST00000548570 NANOS2P60321 138 aaKnown RBP3.54□□□□□ -1.84
APP-217ENST00000548570 DAZ2Q13117 558 aaKnown RBP3.54□□□□□ -1.84
APP-217ENST00000548570 RRN3P1Q2M238 152 aa3.54□□□□□ -1.84
APP-217ENST00000548570 FAM74A3Q4VXF1 159 aa3.54□□□□□ -1.84
APP-217ENST00000548570 IBA57Q5T440 356 aaKnown RBP3.54□□□□□ -1.84
APP-217ENST00000548570 FAM222AQ5U5X8 452 aa3.54□□□□□ -1.84
APP-217ENST00000548570 ATRAIDQ6UW56 229 aa3.54□□□□□ -1.84
APP-217ENST00000548570 FAM159AQ6UWV7 190 aa3.54□□□□□ -1.84
APP-217ENST00000548570 ZNF493Q6ZR52 646 aa3.54□□□□□ -1.84
APP-217ENST00000548570 Q6ZTI0 123 aa3.54□□□□□ -1.84
APP-217ENST00000548570 TMEM208Q9BTX3 173 aa3.54□□□□□ -1.84
APP-217ENST00000548570 NOP10Q9NPE3 64 aaKnown RBP3.54□□□□□ -1.84
APP-217ENST00000548570 U3KQK5 164 aa3.54□□□□□ -1.84
APP-217ENST00000548570 CSMD3Q7Z407 3707 aa3.54□□□□□ -1.84
APP-217ENST00000548570 DNAH1Q9P2D7 4330 aa3.53□□□□□ -1.84
APP-217ENST00000548570 MUC21A0A0G2JKD1 596 aa3.53□□□□□ -1.84
APP-217ENST00000548570 MUC21A0A140T8X8 626 aa3.53□□□□□ -1.84
APP-217ENST00000548570 TMEM189A5PLL7 270 aa3.53□□□□□ -1.84
APP-217ENST00000548570 CBY3A6NI87 242 aa3.53□□□□□ -1.84
APP-217ENST00000548570 B4DEV8 164 aa3.53□□□□□ -1.84
APP-217ENST00000548570 F8W036 122 aa3.53□□□□□ -1.84
APP-217ENST00000548570 NXPH4O95158 308 aa3.53□□□□□ -1.84
APP-217ENST00000548570 ORM1P02763 201 aa3.53□□□□□ -1.84
APP-217ENST00000548570 FOXA3P55318 350 aaPredicted RBP3.53□□□□□ -1.84
APP-217ENST00000548570 LINC00315P59091 139 aa3.53□□□□□ -1.84
APP-217ENST00000548570 ADIRFQ15847 76 aa3.53□□□□□ -1.84
APP-217ENST00000548570 UFSP1Q6NVU6 142 aa3.53□□□□□ -1.84
APP-217ENST00000548570 OR2D3Q8NGH3 330 aa3.53□□□□□ -1.84
APP-217ENST00000548570 OR10AG1Q8NH19 301 aa3.53□□□□□ -1.84
APP-217ENST00000548570 RASL10AQ92737 203 aa3.53□□□□□ -1.84
APP-217ENST00000548570 C16orf74Q96GX8 76 aa3.53□□□□□ -1.84
APP-217ENST00000548570 SFRP2Q96HF1 295 aa3.53□□□□□ -1.84
APP-217ENST00000548570 SEC11CQ9BY50 192 aa3.53□□□□□ -1.84
APP-217ENST00000548570 SAMD10Q9BYL1 202 aa3.53□□□□□ -1.84
APP-217ENST00000548570 RPP21Q9H633 154 aaKnown RBP3.53□□□□□ -1.84
APP-217ENST00000548570 JPT2Q9H910 190 aa3.53□□□□□ -1.84
APP-217ENST00000548570 OSTCQ9NRP0 149 aa3.53□□□□□ -1.84
APP-217ENST00000548570 MRPL16Q9NX20 251 aaKnown RBP3.53□□□□□ -1.84
APP-217ENST00000548570 MSRB1Q9NZV6 116 aa3.53□□□□□ -1.84
APP-217ENST00000548570 SORL1Q92673 2214 aa3.52□□□□□ -1.85
APP-217ENST00000548570 RYR2Q92736 4967 aa3.52□□□□□ -1.85
APP-217ENST00000548570 AGRNO00468 2067 aa3.52□□□□□ -1.85
APP-217ENST00000548570 KMT2CQ8NEZ4 4911 aaKnown RBP3.52□□□□□ -1.85
APP-217ENST00000548570 TRGV11A0A075B6L2 103 aa3.52□□□□□ -1.85
APP-217ENST00000548570 IGHV4-4A0A075B6R2 117 aa3.52□□□□□ -1.85
APP-217ENST00000548570 SMIM27A0A1W2PRY6 76 aa3.52□□□□□ -1.85
APP-217ENST00000548570 PRSS29PA6NIE9 313 aa3.52□□□□□ -1.85
APP-217ENST00000548570 HSBP1L1C9JCN9 74 aa3.52□□□□□ -1.85
APP-217ENST00000548570 USP17L23D6RBM5 183 aa3.52□□□□□ -1.85
APP-217ENST00000548570 H3BVH4 76 aa3.52□□□□□ -1.85
APP-217ENST00000548570 GATCO43716 136 aaKnown RBP3.52□□□□□ -1.85
APP-217ENST00000548570 P01737 135 aa3.52□□□□□ -1.85
APP-217ENST00000548570 CXCL1P09341 107 aa3.52□□□□□ -1.85
APP-217ENST00000548570 OR5AL1P0C617 328 aa3.52□□□□□ -1.85
APP-217ENST00000548570 CTRLP40313 264 aa3.52□□□□□ -1.85
APP-217ENST00000548570 ASIPP42127 132 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms