RNA–Protein interactions for RNA: ENST00000547856.5

RAPGEF3-216, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 2,659 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-216ENST00000547856 ORMDL2Q53FV1 153 aa10.95□□□□□ -0.66
RAPGEF3-216ENST00000547856 TIMD4Q96H15 378 aa10.95□□□□□ -0.66
RAPGEF3-216ENST00000547856 IGLV3-9A0A075B6K5 115 aa10.95□□□□□ -0.66
RAPGEF3-216ENST00000547856 M0R381 172 aa10.95□□□□□ -0.66
RAPGEF3-216ENST00000547856 IGHV1-8P0DP01 117 aa10.95□□□□□ -0.66
RAPGEF3-216ENST00000547856 COX7A1P24310 79 aa10.95□□□□□ -0.66
RAPGEF3-216ENST00000547856 LINC01620Q4KN68 170 aa10.95□□□□□ -0.66
RAPGEF3-216ENST00000547856 MDFICQ9P1T7 246 aa10.95□□□□□ -0.66
RAPGEF3-216ENST00000547856 MALRD1Q5VYJ5 2156 aa10.94□□□□□ -0.66
RAPGEF3-216ENST00000547856 IGHV1-3A0A0C4DH29 117 aa10.94□□□□□ -0.66
RAPGEF3-216ENST00000547856 IGHV7-4-1A0A0J9YVY3 117 aa10.94□□□□□ -0.66
RAPGEF3-216ENST00000547856 DUSP14O95147 198 aaKnown RBP10.94□□□□□ -0.66
RAPGEF3-216ENST00000547856 SUMO2P61956 95 aaKnown RBP10.94□□□□□ -0.66
RAPGEF3-216ENST00000547856 MRPL23Q16540 153 aaKnown RBP10.94□□□□□ -0.66
RAPGEF3-216ENST00000547856 LINC00311Q8N616 119 aa10.94□□□□□ -0.66
RAPGEF3-216ENST00000547856 DUX3Q96PT4 197 aa10.94□□□□□ -0.66
RAPGEF3-216ENST00000547856 ADGRG4Q8IZF6 3080 aa10.94□□□□□ -0.66
RAPGEF3-216ENST00000547856 TIMM23O14925 209 aa10.94□□□□□ -0.66
RAPGEF3-216ENST00000547856 PRR30Q53SZ7 412 aaPredicted RBP10.94□□□□□ -0.66
RAPGEF3-216ENST00000547856 LINC01587Q99440 93 aa10.94□□□□□ -0.66
RAPGEF3-216ENST00000547856 IGHV3-64A0A075B6Q5 118 aa10.93□□□□□ -0.66
RAPGEF3-216ENST00000547856 H3BMM0 161 aa10.93□□□□□ -0.66
RAPGEF3-216ENST00000547856 IGHV3-33P01772 117 aa10.93□□□□□ -0.66
RAPGEF3-216ENST00000547856 CRYGDP07320 174 aa10.93□□□□□ -0.66
RAPGEF3-216ENST00000547856 MGPP08493 103 aa10.93□□□□□ -0.66
RAPGEF3-216ENST00000547856 SLC25A29Q8N8R3 303 aa10.93□□□□□ -0.66
RAPGEF3-216ENST00000547856 UBE2WQ96B02 151 aa10.93□□□□□ -0.66
RAPGEF3-216ENST00000547856 ACACAQ13085 2346 aa10.93□□□□□ -0.66
RAPGEF3-216ENST00000547856 HERVK_113P61574 105 aa10.93□□□□□ -0.66
RAPGEF3-216ENST00000547856 FAM27E3Q08E93 113 aa10.93□□□□□ -0.66
RAPGEF3-216ENST00000547856 PCNX1Q96RV3 2341 aa10.93□□□□□ -0.66
RAPGEF3-216ENST00000547856 RAB1BQ9H0U4 201 aa10.92□□□□□ -0.66
RAPGEF3-216ENST00000547856 CSDC2Q9Y534 153 aaKnown RBP10.92□□□□□ -0.66
RAPGEF3-216ENST00000547856 MUC6Q6W4X9 2439 aa10.92□□□□□ -0.66
RAPGEF3-216ENST00000547856 LOXP28300 417 aaPredicted RBP10.92□□□□□ -0.66
RAPGEF3-216ENST00000547856 DLX6P56179 175 aa10.92□□□□□ -0.66
RAPGEF3-216ENST00000547856 SRSF2Q01130 221 aaKnown RBP10.92□□□□□ -0.66
RAPGEF3-216ENST00000547856 ATXN8Q156A1 80 aa10.92□□□□□ -0.66
RAPGEF3-216ENST00000547856 ZNF672Q499Z4 452 aaPredicted RBP10.92□□□□□ -0.66
RAPGEF3-216ENST00000547856 OOSP1A8MZH6 123 aa10.92□□□□□ -0.66
RAPGEF3-216ENST00000547856 LGALS9O00182 355 aa10.92□□□□□ -0.66
RAPGEF3-216ENST00000547856 TMEM190Q8WZ59 177 aa10.92□□□□□ -0.66
RAPGEF3-216ENST00000547856 PKDREJQ9NTG1 2253 aa10.91□□□□□ -0.66
RAPGEF3-216ENST00000547856 IGLV4-69A0A075B6H9 119 aa10.91□□□□□ -0.66
RAPGEF3-216ENST00000547856 C2orf82Q6UX34 121 aa10.91□□□□□ -0.66
RAPGEF3-216ENST00000547856 TMEM126AQ9H061 195 aa10.91□□□□□ -0.66
RAPGEF3-216ENST00000547856 AGPAT4-IT1Q9H0P7 198 aa10.91□□□□□ -0.66
RAPGEF3-216ENST00000547856 MUSTN1Q8IVN3 82 aa10.91□□□□□ -0.66
RAPGEF3-216ENST00000547856 TMEM263Q8WUH6 116 aaKnown RBP10.91□□□□□ -0.66
RAPGEF3-216ENST00000547856 IGHV3-49A0A0A0MS15 119 aa10.9□□□□□ -0.66
RAPGEF3-216ENST00000547856 MFAP4P55083 255 aa10.9□□□□□ -0.66
RAPGEF3-216ENST00000547856 KLK5Q9Y337 293 aaPredicted RBP10.9□□□□□ -0.66
RAPGEF3-216ENST00000547856 WNK2Q9Y3S1 2297 aa10.9□□□□□ -0.67
RAPGEF3-216ENST00000547856 FAM236AA0A1B0GUQ0 79 aa10.9□□□□□ -0.67
RAPGEF3-216ENST00000547856 FAM236BA0A1B0GV22 79 aa10.9□□□□□ -0.67
RAPGEF3-216ENST00000547856 APC2O95996 2303 aa10.89□□□□□ -0.67
RAPGEF3-216ENST00000547856 LGALS3P17931 250 aaKnown RBP10.89□□□□□ -0.67
RAPGEF3-216ENST00000547856 CEMP1Q6PRD7 247 aaPredicted RBP10.89□□□□□ -0.67
RAPGEF3-216ENST00000547856 F8W735 103 aaPredicted RBP10.89□□□□□ -0.67
RAPGEF3-216ENST00000547856 TSHBP01222 138 aa10.89□□□□□ -0.67
RAPGEF3-216ENST00000547856 RPL39P62891 51 aaKnown RBP10.89□□□□□ -0.67
RAPGEF3-216ENST00000547856 NRGNQ92686 78 aa10.89□□□□□ -0.67
RAPGEF3-216ENST00000547856 SLC50A1Q9BRV3 221 aa10.89□□□□□ -0.67
RAPGEF3-216ENST00000547856 TP53TG1Q9Y2A0 90 aa10.89□□□□□ -0.67
RAPGEF3-216ENST00000547856 MSRB2Q9Y3D2 182 aa10.89□□□□□ -0.67
RAPGEF3-216ENST00000547856 PTPRZ1P23471 2315 aaPredicted RBP10.88□□□□□ -0.67
RAPGEF3-216ENST00000547856 TRGV11A0A075B6L2 103 aa10.88□□□□□ -0.67
RAPGEF3-216ENST00000547856 TRBV10-2A0A0K0K1G8 114 aa10.88□□□□□ -0.67
RAPGEF3-216ENST00000547856 J3QQQ9 107 aa10.88□□□□□ -0.67
RAPGEF3-216ENST00000547856 ZNF22P17026 224 aaPredicted RBP10.88□□□□□ -0.67
RAPGEF3-216ENST00000547856 BUB1B-PAK6H3BSN5 160 aa10.88□□□□□ -0.67
RAPGEF3-216ENST00000547856 TRIAP1O43715 76 aa10.88□□□□□ -0.67
RAPGEF3-216ENST00000547856 C9orf153Q5TBE3 101 aa10.88□□□□□ -0.67
RAPGEF3-216ENST00000547856 CEP295Q9C0D2 2601 aa10.88□□□□□ -0.67
RAPGEF3-216ENST00000547856 RPL13AP40429 203 aaKnown RBP10.87□□□□□ -0.67
RAPGEF3-216ENST00000547856 HES1Q14469 280 aa10.87□□□□□ -0.67
RAPGEF3-216ENST00000547856 C8orf31Q8N9H6 132 aa10.87□□□□□ -0.67
RAPGEF3-216ENST00000547856 ZNRF2Q8NHG8 242 aa10.87□□□□□ -0.67
RAPGEF3-216ENST00000547856 IGF1P05019 195 aa10.87□□□□□ -0.67
RAPGEF3-216ENST00000547856 FANCD2OSQ96PS1 177 aa10.87□□□□□ -0.67
RAPGEF3-216ENST00000547856 TMEM178BH3BS89 294 aa10.86□□□□□ -0.67
RAPGEF3-216ENST00000547856 ADIPOQQ15848 244 aa10.86□□□□□ -0.67
RAPGEF3-216ENST00000547856 SVEP1Q4LDE5 3571 aa10.86□□□□□ -0.67
RAPGEF3-216ENST00000547856 P0DMU3 169 aa10.86□□□□□ -0.67
RAPGEF3-216ENST00000547856 FAM231AP0DMU4 169 aa10.86□□□□□ -0.67
RAPGEF3-216ENST00000547856 FAM231CP0DMU5 169 aa10.86□□□□□ -0.67
RAPGEF3-216ENST00000547856 PMVKQ15126 192 aa10.86□□□□□ -0.67
RAPGEF3-216ENST00000547856 A0A0G2JNJ9 132 aa10.85□□□□□ -0.67
RAPGEF3-216ENST00000547856 RNF223E7ERA6 249 aa10.85□□□□□ -0.67
RAPGEF3-216ENST00000547856 H7C423 109 aa10.85□□□□□ -0.67
RAPGEF3-216ENST00000547856 S100A4P26447 101 aaKnown RBP10.85□□□□□ -0.67
RAPGEF3-216ENST00000547856 AMELXQ99217 191 aa10.85□□□□□ -0.67
RAPGEF3-216ENST00000547856 SPANXA1Q9NS26 97 aa10.85□□□□□ -0.67
RAPGEF3-216ENST00000547856 Q9UFV3 132 aa10.85□□□□□ -0.67
RAPGEF3-216ENST00000547856 POLEQ07864 2286 aa10.85□□□□□ -0.67
RAPGEF3-216ENST00000547856 C17orf100A8MU93 164 aa10.85□□□□□ -0.67
RAPGEF3-216ENST00000547856 ADARB2-AS1A8MUL3 147 aa10.85□□□□□ -0.67
RAPGEF3-216ENST00000547856 Q6ZSV7 163 aa10.85□□□□□ -0.67
RAPGEF3-216ENST00000547856 CLEC2BQ92478 149 aa10.85□□□□□ -0.67
RAPGEF3-216ENST00000547856 IGLV1-47P01700 117 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms