RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 OR1N2Q8NGR9 330 aa12.39□□□□□ -0.43
CHMP1A-204ENST00000547687 F6UB75 175 aa12.38□□□□□ -0.43
CHMP1A-204ENST00000547687 J3KRW8 73 aa12.38□□□□□ -0.43
CHMP1A-204ENST00000547687 GAGE1Q13065 139 aa12.38□□□□□ -0.43
CHMP1A-204ENST00000547687 C20orf144Q9BQM9 153 aa12.38□□□□□ -0.43
CHMP1A-204ENST00000547687 ADARB2-AS1A8MUL3 147 aa12.38□□□□□ -0.43
CHMP1A-204ENST00000547687 LEPROTL1O95214 131 aa12.38□□□□□ -0.43
CHMP1A-204ENST00000547687 OR5AL1P0C617 328 aa12.38□□□□□ -0.43
CHMP1A-204ENST00000547687 CKS2P33552 79 aa12.38□□□□□ -0.43
CHMP1A-204ENST00000547687 SAMD13Q5VXD3 122 aa12.38□□□□□ -0.43
CHMP1A-204ENST00000547687 FA2HQ7L5A8 372 aa12.38□□□□□ -0.43
CHMP1A-204ENST00000547687 WFDC3Q8IUB2 231 aa12.38□□□□□ -0.43
CHMP1A-204ENST00000547687 DPF1Q92782 380 aa12.38□□□□□ -0.43
CHMP1A-204ENST00000547687 DCANP1Q8TF63 244 aa12.37□□□□□ -0.43
CHMP1A-204ENST00000547687 FAM19A4Q96LR4 140 aa12.37□□□□□ -0.43
CHMP1A-204ENST00000547687 AP5S1Q9NUS5 200 aa12.37□□□□□ -0.43
CHMP1A-204ENST00000547687 TRAV21A0A0B4J279 112 aa12.37□□□□□ -0.43
CHMP1A-204ENST00000547687 LOC389332A0A1B0GUA5 103 aa12.37□□□□□ -0.43
CHMP1A-204ENST00000547687 IFI27P40305 119 aaPredicted RBP12.37□□□□□ -0.43
CHMP1A-204ENST00000547687 RNF185Q96GF1 192 aa12.37□□□□□ -0.43
CHMP1A-204ENST00000547687 TMEM70Q9BUB7 260 aa12.37□□□□□ -0.43
CHMP1A-204ENST00000547687 SIGLEC8Q9NYZ4 499 aa12.36□□□□□ -0.43
CHMP1A-204ENST00000547687 TRBV7-9A0A0J9YWB2 115 aa12.35□□□□□ -0.43
CHMP1A-204ENST00000547687 SMKR1H3BMG3 65 aa12.35□□□□□ -0.43
CHMP1A-204ENST00000547687 WIPF1O43516 503 aa12.35□□□□□ -0.43
CHMP1A-204ENST00000547687 LINC00173Q6ZV60 143 aa12.35□□□□□ -0.43
CHMP1A-204ENST00000547687 OR10AG1Q8NH19 301 aa12.35□□□□□ -0.43
CHMP1A-204ENST00000547687 MS4A6AQ9H2W1 248 aa12.35□□□□□ -0.43
CHMP1A-204ENST00000547687 G0S2P27469 103 aa12.35□□□□□ -0.43
CHMP1A-204ENST00000547687 RNASE4P34096 147 aaKnown RBP12.35□□□□□ -0.43
CHMP1A-204ENST00000547687 DLX4Q92988 240 aaPredicted RBP12.35□□□□□ -0.43
CHMP1A-204ENST00000547687 RAX2Q96IS3 184 aa12.35□□□□□ -0.43
CHMP1A-204ENST00000547687 TSSC4Q9Y5U2 329 aaPredicted RBP12.35□□□□□ -0.43
CHMP1A-204ENST00000547687 SNAI2O43623 268 aa12.34□□□□□ -0.43
CHMP1A-204ENST00000547687 NPYP01303 97 aa12.34□□□□□ -0.43
CHMP1A-204ENST00000547687 PPBPP02775 128 aa12.34□□□□□ -0.43
CHMP1A-204ENST00000547687 ADAMTSL5Q6ZMM2 481 aa12.34□□□□□ -0.43
CHMP1A-204ENST00000547687 HSPB8Q9UJY1 196 aa12.34□□□□□ -0.43
CHMP1A-204ENST00000547687 SYS1-DBNDD2H3BUS1 97 aa12.33□□□□□ -0.43
CHMP1A-204ENST00000547687 NCR2O95944 276 aa12.33□□□□□ -0.43
CHMP1A-204ENST00000547687 TFPI2P48307 235 aa12.33□□□□□ -0.43
CHMP1A-204ENST00000547687 CACNG7P62955 275 aa12.33□□□□□ -0.43
CHMP1A-204ENST00000547687 SPATA45Q537H7 98 aa12.33□□□□□ -0.43
CHMP1A-204ENST00000547687 NDUFA11Q86Y39 141 aa12.33□□□□□ -0.43
CHMP1A-204ENST00000547687 APRG1Q8IVJ8 170 aa12.33□□□□□ -0.43
CHMP1A-204ENST00000547687 ATOH7Q8N100 152 aa12.33□□□□□ -0.43
CHMP1A-204ENST00000547687 MIEN1Q9BRT3 115 aa12.33□□□□□ -0.43
CHMP1A-204ENST00000547687 DNAH3Q8TD57 4116 aa12.33□□□□□ -0.44
CHMP1A-204ENST00000547687 IGHV4-4A0A075B6R2 117 aa12.33□□□□□ -0.44
CHMP1A-204ENST00000547687 G3V4G9 280 aa12.33□□□□□ -0.44
CHMP1A-204ENST00000547687 CRXO43186 299 aaPredicted RBP12.33□□□□□ -0.44
CHMP1A-204ENST00000547687 SPANXN1Q5VSR9 72 aa12.33□□□□□ -0.44
CHMP1A-204ENST00000547687 SMIM15Q7Z3B0 74 aa12.33□□□□□ -0.44
CHMP1A-204ENST00000547687 SPATA12Q7Z6I5 190 aa12.33□□□□□ -0.44
CHMP1A-204ENST00000547687 OR9G4Q8NGQ1 327 aa12.33□□□□□ -0.44
CHMP1A-204ENST00000547687 GOLT1BQ9Y3E0 138 aa12.33□□□□□ -0.44
CHMP1A-204ENST00000547687 TIMM8BQ9Y5J9 83 aaPredicted RBP12.33□□□□□ -0.44
CHMP1A-204ENST00000547687 H3BVH4 76 aa12.32□□□□□ -0.44
CHMP1A-204ENST00000547687 MAP1LC3CQ9BXW4 147 aa12.32□□□□□ -0.44
CHMP1A-204ENST00000547687 EVI2AP22794 236 aa12.32□□□□□ -0.44
CHMP1A-204ENST00000547687 KIR3DS1Q14943 382 aa12.32□□□□□ -0.44
CHMP1A-204ENST00000547687 ANXA2RQ3ZCQ2 193 aa12.32□□□□□ -0.44
CHMP1A-204ENST00000547687 ZNF705AQ6ZN79 300 aaPredicted RBP12.32□□□□□ -0.44
CHMP1A-204ENST00000547687 PEMTQ9UBM1 199 aa12.32□□□□□ -0.44
CHMP1A-204ENST00000547687 CCL24O00175 119 aa12.31□□□□□ -0.44
CHMP1A-204ENST00000547687 PRB2P02812 416 aaPredicted RBP12.31□□□□□ -0.44
CHMP1A-204ENST00000547687 ZNF688P0C7X2 276 aa12.31□□□□□ -0.44
CHMP1A-204ENST00000547687 FHL3Q13643 280 aa12.31□□□□□ -0.44
CHMP1A-204ENST00000547687 PSMG4Q5JS54 123 aa12.31□□□□□ -0.44
CHMP1A-204ENST00000547687 LAMTOR2Q9Y2Q5 125 aa12.31□□□□□ -0.44
CHMP1A-204ENST00000547687 K7EQG2 157 aa12.3□□□□□ -0.44
CHMP1A-204ENST00000547687 DLEU1O43261 78 aa12.3□□□□□ -0.44
CHMP1A-204ENST00000547687 SNRPD3P62318 126 aaKnown RBP12.3□□□□□ -0.44
CHMP1A-204ENST00000547687 TRAV9-2A0A087WT02 112 aa12.3□□□□□ -0.44
CHMP1A-204ENST00000547687 C20orf202A1L168 122 aa12.3□□□□□ -0.44
CHMP1A-204ENST00000547687 GAS8-AS1O95177 125 aa12.3□□□□□ -0.44
CHMP1A-204ENST00000547687 S100A4P26447 101 aaKnown RBP12.3□□□□□ -0.44
CHMP1A-204ENST00000547687 ASIPP42127 132 aa12.3□□□□□ -0.44
CHMP1A-204ENST00000547687 MAJINQ3KP22 176 aa12.3□□□□□ -0.44
CHMP1A-204ENST00000547687 OXLD1Q5BKU9 147 aa12.3□□□□□ -0.44
CHMP1A-204ENST00000547687 MAP1LC3AQ9H492 121 aa12.3□□□□□ -0.44
CHMP1A-204ENST00000547687 SORL1Q92673 2214 aa12.29□□□□□ -0.44
CHMP1A-204ENST00000547687 KLLNB2CW77 178 aa12.29□□□□□ -0.44
CHMP1A-204ENST00000547687 CIDEAO60543 219 aa12.29□□□□□ -0.44
CHMP1A-204ENST00000547687 TNFRSF6BO95407 300 aa12.29□□□□□ -0.44
CHMP1A-204ENST00000547687 PET117Q6UWS5 81 aa12.29□□□□□ -0.44
CHMP1A-204ENST00000547687 A0A096LNJ9 63 aa12.28□□□□□ -0.44
CHMP1A-204ENST00000547687 OR4C46A6NHA9 309 aa12.28□□□□□ -0.44
CHMP1A-204ENST00000547687 GNRH2O43555 120 aa12.28□□□□□ -0.44
CHMP1A-204ENST00000547687 MED14OSP0DP75 135 aa12.27□□□□□ -0.44
CHMP1A-204ENST00000547687 GATA1P15976 413 aaPredicted RBP12.27□□□□□ -0.44
CHMP1A-204ENST00000547687 A0A0J9YX75 114 aa12.27□□□□□ -0.45
CHMP1A-204ENST00000547687 A6NJY4 79 aa12.27□□□□□ -0.45
CHMP1A-204ENST00000547687 H0Y8G0 127 aa12.27□□□□□ -0.45
CHMP1A-204ENST00000547687 LEPP41159 167 aa12.27□□□□□ -0.45
CHMP1A-204ENST00000547687 PHLDA3Q9Y5J5 127 aa12.27□□□□□ -0.45
CHMP1A-204ENST00000547687 M0R381 172 aa12.26□□□□□ -0.45
CHMP1A-204ENST00000547687 PF4P02776 101 aa12.26□□□□□ -0.45
CHMP1A-204ENST00000547687 IGLC3P0DOY3 106 aa12.26□□□□□ -0.45
CHMP1A-204ENST00000547687 OR2K2Q8NGT1 345 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms