RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 DOCK7Q96N67 2140 aa10.02□□□□□ -0.8
PTCH1-212ENST00000546744 PKDREJQ9NTG1 2253 aa10.02□□□□□ -0.8
PTCH1-212ENST00000546744 IGKV1-17P01599 117 aa10.02□□□□□ -0.81
PTCH1-212ENST00000546744 IGLV2-8P01709 118 aa10.02□□□□□ -0.81
PTCH1-212ENST00000546744 ZFP2Q6ZN57 461 aa10.02□□□□□ -0.81
PTCH1-212ENST00000546744 MRAPQ8TCY5 172 aa10.02□□□□□ -0.81
PTCH1-212ENST00000546744 MLST8Q9BVC4 326 aa10.02□□□□□ -0.81
PTCH1-212ENST00000546744 ZNF407Q9C0G0 2248 aa10.02□□□□□ -0.81
PTCH1-212ENST00000546744 DKK1O94907 266 aa10.02□□□□□ -0.81
PTCH1-212ENST00000546744 Q6Q795 121 aa10.02□□□□□ -0.81
PTCH1-212ENST00000546744 DYNAPQ8N1N2 210 aa10.02□□□□□ -0.81
PTCH1-212ENST00000546744 OVOL3O00110 214 aa10.02□□□□□ -0.81
PTCH1-212ENST00000546744 PSMB8P28062 276 aa10.02□□□□□ -0.81
PTCH1-212ENST00000546744 VSIG2Q96IQ7 327 aa10.02□□□□□ -0.81
PTCH1-212ENST00000546744 ZFHX2Q9C0A1 2572 aaPredicted RBP10.02□□□□□ -0.81
PTCH1-212ENST00000546744 ADAMTS9Q9P2N4 1935 aa10.01□□□□□ -0.81
PTCH1-212ENST00000546744 ATP6V0E1O15342 81 aa10.01□□□□□ -0.81
PTCH1-212ENST00000546744 C11orf53Q8IXP5 236 aa10.01□□□□□ -0.81
PTCH1-212ENST00000546744 C11orf44Q8N8P7 122 aa10.01□□□□□ -0.81
PTCH1-212ENST00000546744 NOTCH2Q04721 2471 aa10.01□□□□□ -0.81
PTCH1-212ENST00000546744 I3L2K1 104 aa10.01□□□□□ -0.81
PTCH1-212ENST00000546744 CRYGCP07315 174 aa10.01□□□□□ -0.81
PTCH1-212ENST00000546744 CFHR4Q92496 578 aa10.01□□□□□ -0.81
PTCH1-212ENST00000546744 TP53TG3Q9ULZ0 132 aa10.01□□□□□ -0.81
PTCH1-212ENST00000546744 LRP4O75096 1905 aa10.01□□□□□ -0.81
PTCH1-212ENST00000546744 IGHV3-73A0A0B4J1V6 119 aa10.01□□□□□ -0.81
PTCH1-212ENST00000546744 LYNX1G3V0Z9 82 aa10.01□□□□□ -0.81
PTCH1-212ENST00000546744 LYNX1P0DP58 116 aa10.01□□□□□ -0.81
PTCH1-212ENST00000546744 UNC80Q8N2C7 3258 aa10□□□□□ -0.81
PTCH1-212ENST00000546744 P0DMU3 169 aa10□□□□□ -0.81
PTCH1-212ENST00000546744 FAM231AP0DMU4 169 aa10□□□□□ -0.81
PTCH1-212ENST00000546744 FAM231CP0DMU5 169 aa10□□□□□ -0.81
PTCH1-212ENST00000546744 BAALCQ8WXS3 180 aa10□□□□□ -0.81
PTCH1-212ENST00000546744 Q9H8V8 135 aa10□□□□□ -0.81
PTCH1-212ENST00000546744 PIEZO1Q92508 2521 aa10□□□□□ -0.81
PTCH1-212ENST00000546744 MT-ATP8P03928 68 aa10□□□□□ -0.81
PTCH1-212ENST00000546744 GATA3P23771 443 aa10□□□□□ -0.81
PTCH1-212ENST00000546744 ODF3L1Q8IXM7 274 aa10□□□□□ -0.81
PTCH1-212ENST00000546744 Q8N1Y9 231 aa10□□□□□ -0.81
PTCH1-212ENST00000546744 SVIPQ8NHG7 77 aa10□□□□□ -0.81
PTCH1-212ENST00000546744 LGALS9O00182 355 aa9.99□□□□□ -0.81
PTCH1-212ENST00000546744 PLA2G2CQ5R387 149 aa9.99□□□□□ -0.81
PTCH1-212ENST00000546744 PRUNE2Q8WUY3 3088 aa9.99□□□□□ -0.81
PTCH1-212ENST00000546744 IGLV2-14P01704 120 aa9.99□□□□□ -0.81
PTCH1-212ENST00000546744 FGF23Q9GZV9 251 aaPredicted RBP9.99□□□□□ -0.81
PTCH1-212ENST00000546744 TPSG1Q9NRR2 321 aa9.99□□□□□ -0.81
PTCH1-212ENST00000546744 TMEM131Q92545 1883 aa9.99□□□□□ -0.81
PTCH1-212ENST00000546744 ZNF503-AS2A6NEH8 195 aa9.98□□□□□ -0.81
PTCH1-212ENST00000546744 LHBP01229 141 aa9.98□□□□□ -0.81
PTCH1-212ENST00000546744 SAA4P35542 130 aa9.98□□□□□ -0.81
PTCH1-212ENST00000546744 C9orf47Q6ZRZ4 202 aa9.98□□□□□ -0.81
PTCH1-212ENST00000546744 DOCK10Q96BY6 2186 aa9.98□□□□□ -0.81
PTCH1-212ENST00000546744 H3BUX3 64 aa9.98□□□□□ -0.81
PTCH1-212ENST00000546744 PIP4P2Q8N4L2 257 aa9.98□□□□□ -0.81
PTCH1-212ENST00000546744 TP73-AS1Q9UF72 201 aa9.98□□□□□ -0.81
PTCH1-212ENST00000546744 COL6A6A6NMZ7 2263 aa9.98□□□□□ -0.81
PTCH1-212ENST00000546744 IGHV7-4-1A0A0J9YVY3 117 aa9.98□□□□□ -0.81
PTCH1-212ENST00000546744 WI2-2373I1.2A0A1W2PRP0 233 aa9.98□□□□□ -0.81
PTCH1-212ENST00000546744 K7EIM0 57 aa9.98□□□□□ -0.81
PTCH1-212ENST00000546744 C3orf22Q8N5N4 141 aa9.98□□□□□ -0.81
PTCH1-212ENST00000546744 B4DSR2 109 aa9.98□□□□□ -0.81
PTCH1-212ENST00000546744 PRB3Q04118 309 aaPredicted RBP9.98□□□□□ -0.81
PTCH1-212ENST00000546744 IGKV1OR2-108A0A075B7D4 117 aa9.97□□□□□ -0.81
PTCH1-212ENST00000546744 TCL1BO95988 128 aa9.97□□□□□ -0.81
PTCH1-212ENST00000546744 C17orf77Q96MU5 243 aa9.97□□□□□ -0.81
PTCH1-212ENST00000546744 ZNRD1Q9P1U0 126 aa9.97□□□□□ -0.81
PTCH1-212ENST00000546744 FRMD6-AS1P0C7T7 363 aa9.97□□□□□ -0.81
PTCH1-212ENST00000546744 MSRB2Q9Y3D2 182 aa9.97□□□□□ -0.81
PTCH1-212ENST00000546744 ATP5EP56381 51 aaPredicted RBP9.97□□□□□ -0.81
PTCH1-212ENST00000546744 KLHL30-AS1Q8NEE0 82 aa9.97□□□□□ -0.81
PTCH1-212ENST00000546744 NPBQ8NG41 125 aa9.97□□□□□ -0.81
PTCH1-212ENST00000546744 PLCE1Q9P212 2302 aa9.97□□□□□ -0.81
PTCH1-212ENST00000546744 ARFGEF3Q5TH69 2177 aa9.96□□□□□ -0.81
PTCH1-212ENST00000546744 IGLV11-55A0A075B6I3 123 aa9.96□□□□□ -0.81
PTCH1-212ENST00000546744 GATA1P15976 413 aaPredicted RBP9.96□□□□□ -0.81
PTCH1-212ENST00000546744 MALRD1Q5VYJ5 2156 aa9.96□□□□□ -0.81
PTCH1-212ENST00000546744 CRYGBP07316 175 aa9.96□□□□□ -0.81
PTCH1-212ENST00000546744 PFN2P35080 140 aa9.96□□□□□ -0.81
PTCH1-212ENST00000546744 SPINK13Q1W4C9 94 aa9.96□□□□□ -0.81
PTCH1-212ENST00000546744 CDK2AP2O75956 126 aa9.96□□□□□ -0.82
PTCH1-212ENST00000546744 DEFB131AP59861 70 aa9.96□□□□□ -0.82
PTCH1-212ENST00000546744 ZNF503Q96F45 646 aa9.96□□□□□ -0.82
PTCH1-212ENST00000546744 TTTY13Q9BZ97 58 aa9.96□□□□□ -0.82
PTCH1-212ENST00000546744 A0A0J9YXY3 114 aa9.96□□□□□ -0.82
PTCH1-212ENST00000546744 TINCRA0A1B0GVN0 87 aa9.96□□□□□ -0.82
PTCH1-212ENST00000546744 ZNF295-AS1Q8N0V1 137 aa9.96□□□□□ -0.82
PTCH1-212ENST00000546744 LRRC75A-AS1Q8N1F1 130 aa9.96□□□□□ -0.82
PTCH1-212ENST00000546744 LINC00527Q9UJ94 153 aa9.96□□□□□ -0.82
PTCH1-212ENST00000546744 NACAE9PAV3 2078 aa9.95□□□□□ -0.82
PTCH1-212ENST00000546744 CADP27708 2225 aa9.95□□□□□ -0.82
PTCH1-212ENST00000546744 A0A0J9YXV3 536 aa9.95□□□□□ -0.82
PTCH1-212ENST00000546744 TMEM219Q86XT9 240 aa9.95□□□□□ -0.82
PTCH1-212ENST00000546744 ZNRF2Q8NHG8 242 aa9.95□□□□□ -0.82
PTCH1-212ENST00000546744 OTOGLQ3ZCN5 2332 aa9.95□□□□□ -0.82
PTCH1-212ENST00000546744 PRB4P10163 310 aaPredicted RBP9.95□□□□□ -0.82
PTCH1-212ENST00000546744 NBL1P41271 181 aa9.95□□□□□ -0.82
PTCH1-212ENST00000546744 IGHV1-58A0A0C4DH39 117 aa9.95□□□□□ -0.82
PTCH1-212ENST00000546744 E7EQL1 145 aa9.95□□□□□ -0.82
PTCH1-212ENST00000546744 FOXE3Q13461 319 aa9.94□□□□□ -0.82
PTCH1-212ENST00000546744 OPRPNQ99935 248 aaPredicted RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms