RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 ZC2HC1AQ96GY0 325 aa8.22□□□□□ -1.09
YBX3-217ENST00000546164 MANBALQ9NQG1 85 aa8.22□□□□□ -1.09
YBX3-217ENST00000546164 PKHD1P08F94 4074 aa8.21□□□□□ -1.1
YBX3-217ENST00000546164 TRGV4A0A0C4DH28 118 aa8.21□□□□□ -1.1
YBX3-217ENST00000546164 TEX46H3BTG2 121 aa8.21□□□□□ -1.1
YBX3-217ENST00000546164 M0R2N4 97 aa8.21□□□□□ -1.1
YBX3-217ENST00000546164 CIDEAO60543 219 aa8.21□□□□□ -1.1
YBX3-217ENST00000546164 SFTA3P0C7M3 94 aa8.21□□□□□ -1.1
YBX3-217ENST00000546164 CCL20P78556 96 aa8.21□□□□□ -1.1
YBX3-217ENST00000546164 ESRGQ1W209 222 aa8.21□□□□□ -1.1
YBX3-217ENST00000546164 PIK3CD-AS1Q5SR53 167 aa8.21□□□□□ -1.1
YBX3-217ENST00000546164 DNLZQ5SXM8 178 aa8.21□□□□□ -1.1
YBX3-217ENST00000546164 OR4C5Q8NGB2 326 aa8.21□□□□□ -1.1
YBX3-217ENST00000546164 MRPS16Q9Y3D3 137 aaKnown RBP8.21□□□□□ -1.1
YBX3-217ENST00000546164 ICOSQ9Y6W8 199 aa8.21□□□□□ -1.1
YBX3-217ENST00000546164 NBDYA0A0U1RRE5 68 aa8.2□□□□□ -1.1
YBX3-217ENST00000546164 SCO2A0A1W2PP80 73 aa8.2□□□□□ -1.1
YBX3-217ENST00000546164 SH2D1AO60880 128 aa8.2□□□□□ -1.1
YBX3-217ENST00000546164 MRPL23Q16540 153 aaKnown RBP8.2□□□□□ -1.1
YBX3-217ENST00000546164 ZNF674Q2M3X9 581 aa8.2□□□□□ -1.1
YBX3-217ENST00000546164 ZNF876PQ49A33 203 aa8.2□□□□□ -1.1
YBX3-217ENST00000546164 FAM162BQ5T6X4 162 aa8.2□□□□□ -1.1
YBX3-217ENST00000546164 C11orf52Q96A22 123 aa8.2□□□□□ -1.1
YBX3-217ENST00000546164 TXNDC17Q9BRA2 123 aa8.2□□□□□ -1.1
YBX3-217ENST00000546164 MLST8Q9BVC4 326 aa8.2□□□□□ -1.1
YBX3-217ENST00000546164 IL36BQ9NZH7 164 aa8.2□□□□□ -1.1
YBX3-217ENST00000546164 PKD1P98161 4303 aa8.2□□□□□ -1.1
YBX3-217ENST00000546164 KRBOX1C9JBD0 128 aa8.19□□□□□ -1.1
YBX3-217ENST00000546164 RTL8CO15255 209 aa8.19□□□□□ -1.1
YBX3-217ENST00000546164 RS1O15537 224 aa8.19□□□□□ -1.1
YBX3-217ENST00000546164 ORM1P02763 201 aa8.19□□□□□ -1.1
YBX3-217ENST00000546164 GATA1P15976 413 aaPredicted RBP8.19□□□□□ -1.1
YBX3-217ENST00000546164 ASIPP42127 132 aa8.19□□□□□ -1.1
YBX3-217ENST00000546164 Q9H8V8 135 aa8.19□□□□□ -1.1
YBX3-217ENST00000546164 GNG13Q9P2W3 67 aa8.19□□□□□ -1.1
YBX3-217ENST00000546164 PGPEP1LA6NFU8 196 aa8.18□□□□□ -1.1
YBX3-217ENST00000546164 B4DEV8 164 aa8.18□□□□□ -1.1
YBX3-217ENST00000546164 C9JCJ5 164 aa8.18□□□□□ -1.1
YBX3-217ENST00000546164 S100A4P26447 101 aaKnown RBP8.18□□□□□ -1.1
YBX3-217ENST00000546164 ZNF506Q5JVG8 444 aa8.18□□□□□ -1.1
YBX3-217ENST00000546164 CFAP126Q5VTH2 177 aa8.18□□□□□ -1.1
YBX3-217ENST00000546164 ZNF575Q86XF7 245 aa8.18□□□□□ -1.1
YBX3-217ENST00000546164 BAGE2Q86Y30 109 aa8.18□□□□□ -1.1
YBX3-217ENST00000546164 A0A1B0GVG6 124 aa8.17□□□□□ -1.1
YBX3-217ENST00000546164 K7EQD1 137 aa8.17□□□□□ -1.1
YBX3-217ENST00000546164 M0R036 132 aa8.17□□□□□ -1.1
YBX3-217ENST00000546164 RPL35P42766 123 aaKnown RBP8.17□□□□□ -1.1
YBX3-217ENST00000546164 TTC32Q5I0X7 151 aa8.17□□□□□ -1.1
YBX3-217ENST00000546164 SOHLH1Q5JUK2 328 aa8.17□□□□□ -1.1
YBX3-217ENST00000546164 NEGR1Q7Z3B1 354 aa8.17□□□□□ -1.1
YBX3-217ENST00000546164 SCRT2Q9NQ03 307 aa8.17□□□□□ -1.1
YBX3-217ENST00000546164 TRBV6-4A0A1B0GX49 114 aa8.16□□□□□ -1.1
YBX3-217ENST00000546164 A0A1W2PPQ1 181 aa8.16□□□□□ -1.1
YBX3-217ENST00000546164 A8MWV9 139 aa8.16□□□□□ -1.1
YBX3-217ENST00000546164 IFNA1P01562 189 aa8.16□□□□□ -1.1
YBX3-217ENST00000546164 CXCL1P09341 107 aa8.16□□□□□ -1.1
YBX3-217ENST00000546164 ARMS2P0C7Q2 107 aa8.16□□□□□ -1.1
YBX3-217ENST00000546164 BCL2P10415 239 aa8.16□□□□□ -1.1
YBX3-217ENST00000546164 GYPEP15421 78 aa8.16□□□□□ -1.1
YBX3-217ENST00000546164 SRIP30626 198 aa8.16□□□□□ -1.1
YBX3-217ENST00000546164 TAGLN2P37802 199 aaKnown RBP8.16□□□□□ -1.1
YBX3-217ENST00000546164 MEF2BQ02080 365 aaPredicted RBP8.16□□□□□ -1.1
YBX3-217ENST00000546164 C1orf134Q5TEV5 83 aa8.16□□□□□ -1.1
YBX3-217ENST00000546164 LYPD5Q6UWN5 251 aa8.16□□□□□ -1.1
YBX3-217ENST00000546164 ZFP2Q6ZN57 461 aa8.16□□□□□ -1.1
YBX3-217ENST00000546164 NHLRC2Q8NBF2 726 aa8.16□□□□□ -1.1
YBX3-217ENST00000546164 PCNPQ8WW12 178 aaKnown RBP8.16□□□□□ -1.1
YBX3-217ENST00000546164 A0A1B0GVY2 172 aa8.15□□□□□ -1.1
YBX3-217ENST00000546164 H3BVH4 76 aa8.15□□□□□ -1.1
YBX3-217ENST00000546164 PDE6DO43924 150 aa8.15□□□□□ -1.1
YBX3-217ENST00000546164 MED14OSP0DP75 135 aa8.15□□□□□ -1.1
YBX3-217ENST00000546164 BTF3P20290 206 aaKnown RBP8.15□□□□□ -1.1
YBX3-217ENST00000546164 TIRAPP58753 221 aa8.15□□□□□ -1.1
YBX3-217ENST00000546164 SH2D6Q7Z4S9 175 aa8.15□□□□□ -1.1
YBX3-217ENST00000546164 SLC25A29Q8N8R3 303 aa8.15□□□□□ -1.1
YBX3-217ENST00000546164 GRIFINA4D1Z8 144 aa8.14□□□□□ -1.11
YBX3-217ENST00000546164 PRSS29PA6NIE9 313 aa8.14□□□□□ -1.11
YBX3-217ENST00000546164 MGST1P10620 155 aaKnown RBP8.14□□□□□ -1.11
YBX3-217ENST00000546164 RHOHQ15669 191 aa8.14□□□□□ -1.11
YBX3-217ENST00000546164 C6orf223Q8N319 242 aa8.14□□□□□ -1.11
YBX3-217ENST00000546164 SYT8Q8NBV8 401 aa8.14□□□□□ -1.11
YBX3-217ENST00000546164 SMIM12Q96EX1 92 aa8.14□□□□□ -1.11
YBX3-217ENST00000546164 DERL1Q9BUN8 251 aa8.14□□□□□ -1.11
YBX3-217ENST00000546164 KRTAP1-5Q9BYS1 174 aa8.14□□□□□ -1.11
YBX3-217ENST00000546164 PARLQ9H300 379 aa8.14□□□□□ -1.11
YBX3-217ENST00000546164 VAX2Q9UIW0 290 aa8.14□□□□□ -1.11
YBX3-217ENST00000546164 HERC2O95714 4834 aa8.14□□□□□ -1.11
YBX3-217ENST00000546164 LOC100131303A0A0U1RQF7 123 aa8.13□□□□□ -1.11
YBX3-217ENST00000546164 SIVA1O15304 175 aa8.13□□□□□ -1.11
YBX3-217ENST00000546164 NXPH4O95158 308 aa8.13□□□□□ -1.11
YBX3-217ENST00000546164 BLOC1S1P78537 153 aa8.13□□□□□ -1.11
YBX3-217ENST00000546164 CENPWQ5EE01 88 aa8.13□□□□□ -1.11
YBX3-217ENST00000546164 UFSP1Q6NVU6 142 aa8.13□□□□□ -1.11
YBX3-217ENST00000546164 ALKAL2Q6UX46 152 aa8.13□□□□□ -1.11
YBX3-217ENST00000546164 Q8N3U1 123 aa8.13□□□□□ -1.11
YBX3-217ENST00000546164 LYPD6BQ8NI32 183 aa8.13□□□□□ -1.11
YBX3-217ENST00000546164 PRADC1Q9BSG0 188 aa8.13□□□□□ -1.11
YBX3-217ENST00000546164 PHLDA3Q9Y5J5 127 aa8.13□□□□□ -1.11
YBX3-217ENST00000546164 TMSB15BA0A087X1C1 80 aa8.12□□□□□ -1.11
YBX3-217ENST00000546164 IGHV3-73A0A0B4J1V6 119 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms