RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 MSRB2Q9Y3D2 182 aa7.62□□□□□ -1.19
TRAF1-203ENST00000546084 TRBV20-1A0A075B6N2 111 aa7.61□□□□□ -1.19
TRAF1-203ENST00000546084 H3BRN7 92 aa7.61□□□□□ -1.19
TRAF1-203ENST00000546084 GAGE2BQ13066 116 aa7.61□□□□□ -1.19
TRAF1-203ENST00000546084 Q1RN00 199 aa7.61□□□□□ -1.19
TRAF1-203ENST00000546084 GAGE2EQ4V326 116 aa7.61□□□□□ -1.19
TRAF1-203ENST00000546084 TMEM170BQ5T4T1 132 aa7.61□□□□□ -1.19
TRAF1-203ENST00000546084 ZC2HC1BQ5TFG8 222 aa7.61□□□□□ -1.19
TRAF1-203ENST00000546084 ADAMTSL5Q6ZMM2 481 aa7.61□□□□□ -1.19
TRAF1-203ENST00000546084 BEX4Q9NWD9 120 aaPredicted RBP7.61□□□□□ -1.19
TRAF1-203ENST00000546084 GAGE2DQ9UEU5 116 aa7.61□□□□□ -1.19
TRAF1-203ENST00000546084 IGHV4-61A0A0C4DH41 118 aa7.61□□□□□ -1.19
TRAF1-203ENST00000546084 INS-IGF2F8WCM5 200 aa7.61□□□□□ -1.19
TRAF1-203ENST00000546084 K7ERJ3 54 aa7.61□□□□□ -1.19
TRAF1-203ENST00000546084 PRSS2P07478 247 aa7.61□□□□□ -1.19
TRAF1-203ENST00000546084 FAM104BQ5XKR9 115 aa7.61□□□□□ -1.19
TRAF1-203ENST00000546084 Q6AWC8 147 aa7.61□□□□□ -1.19
TRAF1-203ENST00000546084 C2orf91Q6ZV80 131 aa7.61□□□□□ -1.19
TRAF1-203ENST00000546084 CFHR4Q92496 578 aa7.61□□□□□ -1.19
TRAF1-203ENST00000546084 AGPAT4-IT1Q9H0P7 198 aa7.61□□□□□ -1.19
TRAF1-203ENST00000546084 C9orf118A6NHY6 69 aa7.6□□□□□ -1.19
TRAF1-203ENST00000546084 GNRH2O43555 120 aa7.6□□□□□ -1.19
TRAF1-203ENST00000546084 IGLV2-11P01706 119 aa7.6□□□□□ -1.19
TRAF1-203ENST00000546084 CRIP1P50238 77 aa7.6□□□□□ -1.19
TRAF1-203ENST00000546084 C3orf36Q3SXR2 165 aa7.6□□□□□ -1.19
TRAF1-203ENST00000546084 FAM159AQ6UWV7 190 aa7.6□□□□□ -1.19
TRAF1-203ENST00000546084 C10orf126Q8N4M7 172 aa7.6□□□□□ -1.19
TRAF1-203ENST00000546084 OR4X2Q8NGF9 303 aa7.6□□□□□ -1.19
TRAF1-203ENST00000546084 SCGB3A1Q96QR1 104 aa7.6□□□□□ -1.19
TRAF1-203ENST00000546084 C1QTNF4Q9BXJ3 329 aa7.6□□□□□ -1.19
TRAF1-203ENST00000546084 SMIM13P0DJ93 91 aa7.6□□□□□ -1.19
TRAF1-203ENST00000546084 DEFB136Q30KP8 78 aa7.6□□□□□ -1.19
TRAF1-203ENST00000546084 ETDBQ3ZM63 59 aa7.6□□□□□ -1.19
TRAF1-203ENST00000546084 KLK9Q9UKQ9 250 aa7.6□□□□□ -1.19
TRAF1-203ENST00000546084 NBL1P41271 181 aa7.6□□□□□ -1.19
TRAF1-203ENST00000546084 UNQ9165/PRO28630Q6UXU0 137 aa7.6□□□□□ -1.19
TRAF1-203ENST00000546084 C8orf86Q6ZUL3 223 aa7.6□□□□□ -1.19
TRAF1-203ENST00000546084 PIP4P2Q8N4L2 257 aa7.6□□□□□ -1.19
TRAF1-203ENST00000546084 NPC2P61916 151 aa7.59□□□□□ -1.19
TRAF1-203ENST00000546084 NPIPB6E9PJ23 425 aa7.59□□□□□ -1.19
TRAF1-203ENST00000546084 H3BRM9 83 aa7.59□□□□□ -1.19
TRAF1-203ENST00000546084 SYNJ2BPP57105 145 aa7.59□□□□□ -1.19
TRAF1-203ENST00000546084 SAMD5Q5TGI4 173 aa7.59□□□□□ -1.19
TRAF1-203ENST00000546084 C10orf99Q6UWK7 81 aa7.59□□□□□ -1.19
TRAF1-203ENST00000546084 RHPN1-AS1Q9BWJ2 59 aa7.59□□□□□ -1.19
TRAF1-203ENST00000546084 TNFRSF18Q9Y5U5 241 aa7.59□□□□□ -1.19
TRAF1-203ENST00000546084 TCTEX1D4Q5JR98 221 aa7.58□□□□□ -1.2
TRAF1-203ENST00000546084 OR9G4Q8NGQ1 327 aa7.58□□□□□ -1.2
TRAF1-203ENST00000546084 TMEM14CQ9P0S9 112 aa7.58□□□□□ -1.2
TRAF1-203ENST00000546084 MEIG1Q5JSS6 88 aa7.58□□□□□ -1.2
TRAF1-203ENST00000546084 Q8N9W7 124 aa7.58□□□□□ -1.2
TRAF1-203ENST00000546084 TRAV25A0A0B4J276 109 aa7.58□□□□□ -1.2
TRAF1-203ENST00000546084 Q6ZS46 218 aa7.58□□□□□ -1.2
TRAF1-203ENST00000546084 DTX2Q86UW9 622 aa7.58□□□□□ -1.2
TRAF1-203ENST00000546084 ZNF418Q8TF45 676 aaPredicted RBP7.58□□□□□ -1.2
TRAF1-203ENST00000546084 NPFFR1Q9GZQ6 430 aa7.58□□□□□ -1.2
TRAF1-203ENST00000546084 RNF223E7ERA6 249 aa7.57□□□□□ -1.2
TRAF1-203ENST00000546084 LGALS9BQ3B8N2 356 aa7.57□□□□□ -1.2
TRAF1-203ENST00000546084 RNASE13Q5GAN3 156 aaKnown RBP7.57□□□□□ -1.2
TRAF1-203ENST00000546084 LGALS9CQ6DKI2 356 aa7.57□□□□□ -1.2
TRAF1-203ENST00000546084 IGHV4-30-2A0A087WSY4 118 aa7.57□□□□□ -1.2
TRAF1-203ENST00000546084 K7EP34 96 aa7.57□□□□□ -1.2
TRAF1-203ENST00000546084 SPINK13Q1W4C9 94 aa7.57□□□□□ -1.2
TRAF1-203ENST00000546084 ITLN2Q8WWU7 325 aaPredicted RBP7.57□□□□□ -1.2
TRAF1-203ENST00000546084 JPT2Q9H910 190 aa7.57□□□□□ -1.2
TRAF1-203ENST00000546084 FLNAP21333 2647 aaKnown RBP7.57□□□□□ -1.2
TRAF1-203ENST00000546084 IGLV11-55A0A075B6I3 123 aa7.57□□□□□ -1.2
TRAF1-203ENST00000546084 F5H768 121 aa7.57□□□□□ -1.2
TRAF1-203ENST00000546084 ASIPP42127 132 aa7.57□□□□□ -1.2
TRAF1-203ENST00000546084 TMEM8BA6NDV4 472 aa7.56□□□□□ -1.2
TRAF1-203ENST00000546084 AMTNQ6UX39 209 aa7.56□□□□□ -1.2
TRAF1-203ENST00000546084 RPL39LQ96EH5 51 aaKnown RBP7.56□□□□□ -1.2
TRAF1-203ENST00000546084 CENPVL3A0A0U1RRI6 287 aa7.56□□□□□ -1.2
TRAF1-203ENST00000546084 A0A1W2PPM0 123 aa7.56□□□□□ -1.2
TRAF1-203ENST00000546084 M0R1W7 72 aa7.56□□□□□ -1.2
TRAF1-203ENST00000546084 IGHV4-39P01824 125 aa7.56□□□□□ -1.2
TRAF1-203ENST00000546084 PRM2P04554 102 aa7.56□□□□□ -1.2
TRAF1-203ENST00000546084 EDN2P20800 178 aa7.56□□□□□ -1.2
TRAF1-203ENST00000546084 SYT8Q8NBV8 401 aa7.56□□□□□ -1.2
TRAF1-203ENST00000546084 PTH2Q96A98 100 aa7.56□□□□□ -1.2
TRAF1-203ENST00000546084 IGHV4-59P01825 116 aa7.56□□□□□ -1.2
TRAF1-203ENST00000546084 LYPD1Q8N2G4 141 aa7.56□□□□□ -1.2
TRAF1-203ENST00000546084 MRPL35Q9NZE8 188 aaKnown RBP7.56□□□□□ -1.2
TRAF1-203ENST00000546084 PKIGQ9Y2B9 76 aa7.56□□□□□ -1.2
TRAF1-203ENST00000546084 ZNF415Q09FC8 603 aa7.55□□□□□ -1.2
TRAF1-203ENST00000546084 MRGPRG-AS1Q2M3A8 158 aa7.55□□□□□ -1.2
TRAF1-203ENST00000546084 SMPXQ9UHP9 88 aa7.55□□□□□ -1.2
TRAF1-203ENST00000546084 A0A096LNJ9 63 aa7.55□□□□□ -1.2
TRAF1-203ENST00000546084 GATA3P23771 443 aa7.55□□□□□ -1.2
TRAF1-203ENST00000546084 PSMB2P49721 201 aa7.55□□□□□ -1.2
TRAF1-203ENST00000546084 UBE2E1P51965 193 aa7.55□□□□□ -1.2
TRAF1-203ENST00000546084 FXYD2P54710 66 aa7.55□□□□□ -1.2
TRAF1-203ENST00000546084 HIST2H2BCQ6DN03 193 aa7.55□□□□□ -1.2
TRAF1-203ENST00000546084 DYNLRB2Q8TF09 96 aa7.55□□□□□ -1.2
TRAF1-203ENST00000546084 MOB4Q9Y3A3 225 aa7.55□□□□□ -1.2
TRAF1-203ENST00000546084 IGHV3-16A0A0C4DH30 117 aa7.55□□□□□ -1.2
TRAF1-203ENST00000546084 IGHV3-53P01767 116 aa7.55□□□□□ -1.2
TRAF1-203ENST00000546084 IGKCP01834 107 aa7.55□□□□□ -1.2
TRAF1-203ENST00000546084 DGAT2L7PQ6IED9 249 aa7.55□□□□□ -1.2
TRAF1-203ENST00000546084 ITPR3Q14573 2671 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms