RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 FABP5P3A8MUU1 101 aa13.47□□□□□ -0.25
CHD4-213ENST00000545584 G3V3Q6 166 aa13.47□□□□□ -0.25
CHD4-213ENST00000545584 PEX7O00628 323 aa13.47□□□□□ -0.25
CHD4-213ENST00000545584 ARPC5O15511 151 aa13.47□□□□□ -0.25
CHD4-213ENST00000545584 RNASE3P12724 160 aaKnown RBP13.47□□□□□ -0.25
CHD4-213ENST00000545584 FGF8P55075 233 aaPredicted RBP13.47□□□□□ -0.25
CHD4-213ENST00000545584 CDPF1Q6NVV7 123 aa13.47□□□□□ -0.25
CHD4-213ENST00000545584 DPPA3Q6W0C5 159 aa13.47□□□□□ -0.25
CHD4-213ENST00000545584 HIST1H2BAQ96A08 127 aa13.47□□□□□ -0.25
CHD4-213ENST00000545584 MGST1P10620 155 aaKnown RBP13.46□□□□□ -0.25
CHD4-213ENST00000545584 RYR1P21817 5038 aa13.46□□□□□ -0.26
CHD4-213ENST00000545584 A0A087WTM6 91 aa13.45□□□□□ -0.26
CHD4-213ENST00000545584 MAP1LC3B2A6NCE7 125 aa13.45□□□□□ -0.26
CHD4-213ENST00000545584 FAM74A7A6NL05 159 aa13.45□□□□□ -0.26
CHD4-213ENST00000545584 ASIPP42127 132 aa13.45□□□□□ -0.26
CHD4-213ENST00000545584 OR10J3Q5JRS4 329 aa13.45□□□□□ -0.26
CHD4-213ENST00000545584 Q86TA4 180 aa13.45□□□□□ -0.26
CHD4-213ENST00000545584 MAP1LC3BQ9GZQ8 125 aa13.45□□□□□ -0.26
CHD4-213ENST00000545584 LRP1BQ9NZR2 4599 aa13.44□□□□□ -0.26
CHD4-213ENST00000545584 IGKV3D-20A0A0C4DH25 116 aa13.44□□□□□ -0.26
CHD4-213ENST00000545584 A8MWV9 139 aa13.44□□□□□ -0.26
CHD4-213ENST00000545584 LGALSLQ3ZCW2 172 aaPredicted RBP13.44□□□□□ -0.26
CHD4-213ENST00000545584 Q8N1X5 172 aa13.44□□□□□ -0.26
CHD4-213ENST00000545584 STOML3Q8TAV4 291 aa13.44□□□□□ -0.26
CHD4-213ENST00000545584 LINC01556Q5JQF7 62 aa13.43□□□□□ -0.26
CHD4-213ENST00000545584 PIK3CD-AS1Q5SR53 167 aa13.43□□□□□ -0.26
CHD4-213ENST00000545584 ATP6V0E2Q8NHE4 81 aa13.43□□□□□ -0.26
CHD4-213ENST00000545584 SCRT2Q9NQ03 307 aa13.43□□□□□ -0.26
CHD4-213ENST00000545584 ZFP30Q9Y2G7 519 aa13.43□□□□□ -0.26
CHD4-213ENST00000545584 HSPG2P98160 4391 aa13.42□□□□□ -0.26
CHD4-213ENST00000545584 B4DEV8 164 aa13.42□□□□□ -0.26
CHD4-213ENST00000545584 PSCAO43653 123 aa13.42□□□□□ -0.26
CHD4-213ENST00000545584 UBE2G1P62253 170 aa13.42□□□□□ -0.26
CHD4-213ENST00000545584 LELP1Q5T871 98 aa13.42□□□□□ -0.26
CHD4-213ENST00000545584 ZFP2Q6ZN57 461 aa13.42□□□□□ -0.26
CHD4-213ENST00000545584 GTSF1LQ9H1H1 148 aa13.42□□□□□ -0.26
CHD4-213ENST00000545584 CYTL1Q9NRR1 136 aa13.42□□□□□ -0.26
CHD4-213ENST00000545584 SMLR1H3BR10 107 aa13.41□□□□□ -0.26
CHD4-213ENST00000545584 FMC1Q96HJ9 113 aa13.41□□□□□ -0.26
CHD4-213ENST00000545584 TCEAL7Q9BRU2 100 aa13.41□□□□□ -0.26
CHD4-213ENST00000545584 PARLQ9H300 379 aa13.41□□□□□ -0.26
CHD4-213ENST00000545584 IL36BQ9NZH7 164 aa13.41□□□□□ -0.26
CHD4-213ENST00000545584 FUSP35637 526 aaKnown RBP eCLIP13.4□□□□□ -0.26
CHD4-213ENST00000545584 CST9LP1Q5W188 147 aa13.4□□□□□ -0.26
CHD4-213ENST00000545584 SYT8Q8NBV8 401 aa13.4□□□□□ -0.26
CHD4-213ENST00000545584 IBA57-AS1B1ANH7 110 aa13.39□□□□□ -0.27
CHD4-213ENST00000545584 H3BVH4 76 aa13.39□□□□□ -0.27
CHD4-213ENST00000545584 M0R036 132 aa13.39□□□□□ -0.27
CHD4-213ENST00000545584 FHITP49789 147 aa13.39□□□□□ -0.27
CHD4-213ENST00000545584 FAM162BQ5T6X4 162 aa13.39□□□□□ -0.27
CHD4-213ENST00000545584 ZC2HC1AQ96GY0 325 aa13.39□□□□□ -0.27
CHD4-213ENST00000545584 SH2D1AO60880 128 aa13.38□□□□□ -0.27
CHD4-213ENST00000545584 IGHV3-30P01768 117 aa13.38□□□□□ -0.27
CHD4-213ENST00000545584 IGHV3-33P01772 117 aa13.38□□□□□ -0.27
CHD4-213ENST00000545584 IGHV3-30-3P0DP02 117 aa13.38□□□□□ -0.27
CHD4-213ENST00000545584 IGHV3-30-5P0DP03 117 aa13.38□□□□□ -0.27
CHD4-213ENST00000545584 COX8CQ7Z4L0 72 aa13.38□□□□□ -0.27
CHD4-213ENST00000545584 GAGE12JA6NER3 117 aa13.37□□□□□ -0.27
CHD4-213ENST00000545584 KRBOX1C9JBD0 128 aa13.37□□□□□ -0.27
CHD4-213ENST00000545584 RHODO00212 210 aa13.37□□□□□ -0.27
CHD4-213ENST00000545584 ARMS2P0C7Q2 107 aa13.37□□□□□ -0.27
CHD4-213ENST00000545584 AKR1C3P42330 323 aa13.37□□□□□ -0.27
CHD4-213ENST00000545584 CRIP1P50238 77 aa13.37□□□□□ -0.27
CHD4-213ENST00000545584 GAGE1Q13065 139 aa13.37□□□□□ -0.27
CHD4-213ENST00000545584 GAGE4Q13068 117 aa13.37□□□□□ -0.27
CHD4-213ENST00000545584 GAGE5Q13069 117 aa13.37□□□□□ -0.27
CHD4-213ENST00000545584 ZNF345Q14585 488 aa13.37□□□□□ -0.27
CHD4-213ENST00000545584 GAGE13Q4V321 117 aa13.37□□□□□ -0.27
CHD4-213ENST00000545584 DNLZQ5SXM8 178 aa13.37□□□□□ -0.27
CHD4-213ENST00000545584 KCNRGQ8N5I3 272 aa13.37□□□□□ -0.27
CHD4-213ENST00000545584 OR11H4Q8NGC9 324 aa13.37□□□□□ -0.27
CHD4-213ENST00000545584 TRBV6-1A0A0K0K1D8 114 aa13.36□□□□□ -0.27
CHD4-213ENST00000545584 DMRTA1Q5VZB9 504 aa13.36□□□□□ -0.27
CHD4-213ENST00000545584 Q6ZSN1 163 aa13.36□□□□□ -0.27
CHD4-213ENST00000545584 Q9HAA7 133 aa13.36□□□□□ -0.27
CHD4-213ENST00000545584 PHLDA3Q9Y5J5 127 aa13.36□□□□□ -0.27
CHD4-213ENST00000545584 GRIFINA4D1Z8 144 aa13.35□□□□□ -0.27
CHD4-213ENST00000545584 UMAD1C9J7I0 102 aa13.35□□□□□ -0.27
CHD4-213ENST00000545584 SEC11BP0C7V7 166 aa13.35□□□□□ -0.27
CHD4-213ENST00000545584 TPT1P13693 172 aaKnown RBP13.35□□□□□ -0.27
CHD4-213ENST00000545584 JPT2Q9H910 190 aa13.35□□□□□ -0.27
CHD4-213ENST00000545584 KANTRA0A1W2PQU2 76 aa13.34□□□□□ -0.27
CHD4-213ENST00000545584 PAGE4O60829 102 aa13.34□□□□□ -0.27
CHD4-213ENST00000545584 LTAP01374 205 aa13.34□□□□□ -0.27
CHD4-213ENST00000545584 ZNF674Q2M3X9 581 aa13.34□□□□□ -0.27
CHD4-213ENST00000545584 FAM213BQ8TBF2 198 aa13.34□□□□□ -0.27
CHD4-213ENST00000545584 SFT2D1Q8WV19 159 aa13.34□□□□□ -0.27
CHD4-213ENST00000545584 SAMD10Q9BYL1 202 aa13.34□□□□□ -0.27
CHD4-213ENST00000545584 A0A087WWC5 75 aa13.33□□□□□ -0.28
CHD4-213ENST00000545584 TMSB15BA0A087X1C1 80 aa13.33□□□□□ -0.28
CHD4-213ENST00000545584 A0A0D9SG52 128 aa13.33□□□□□ -0.28
CHD4-213ENST00000545584 HMSDA8MTL9 139 aa13.33□□□□□ -0.28
CHD4-213ENST00000545584 S100A9P06702 114 aaKnown RBP13.33□□□□□ -0.28
CHD4-213ENST00000545584 GCSHP23434 173 aa13.33□□□□□ -0.28
CHD4-213ENST00000545584 LAGE3Q14657 143 aa13.33□□□□□ -0.28
CHD4-213ENST00000545584 LINC01559Q495D7 138 aa13.33□□□□□ -0.28
CHD4-213ENST00000545584 FAM74A4Q5TZK3 123 aa13.33□□□□□ -0.28
CHD4-213ENST00000545584 UFSP1Q6NVU6 142 aa13.33□□□□□ -0.28
CHD4-213ENST00000545584 ZNF471Q9BX82 626 aaPredicted RBP13.33□□□□□ -0.28
CHD4-213ENST00000545584 DNAH5Q8TE73 4624 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms