RNA–Protein interactions for RNA: ENST00000545115.5

DDX11-228, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-228ENST00000545115 PTH2Q96A98 100 aa9.43□□□□□ -0.9
DDX11-228ENST00000545115 PSMG3Q9BT73 122 aaPredicted RBP9.43□□□□□ -0.9
DDX11-228ENST00000545115 PSG8Q9UQ74 426 aa9.43□□□□□ -0.9
DDX11-228ENST00000545115 PGPEP1LA6NFU8 196 aa9.42□□□□□ -0.9
DDX11-228ENST00000545115 IGLV2-11P01706 119 aa9.42□□□□□ -0.9
DDX11-228ENST00000545115 RNASE3P12724 160 aaKnown RBP9.42□□□□□ -0.9
DDX11-228ENST00000545115 CYB561D1Q8N8Q1 229 aa9.42□□□□□ -0.9
DDX11-228ENST00000545115 EPDR1Q9UM22 224 aa9.42□□□□□ -0.9
DDX11-228ENST00000545115 GGTLC3B5MD39 225 aa9.41□□□□□ -0.9
DDX11-228ENST00000545115 MBP02144 154 aa9.41□□□□□ -0.9
DDX11-228ENST00000545115 SUMO1P63165 101 aaKnown RBP9.41□□□□□ -0.9
DDX11-228ENST00000545115 PRNTQ86SH4 94 aa9.41□□□□□ -0.9
DDX11-228ENST00000545115 TM2D2Q9BX73 214 aa9.41□□□□□ -0.9
DDX11-228ENST00000545115 SH3BGRL3Q9H299 93 aa9.41□□□□□ -0.9
DDX11-228ENST00000545115 TMEM167BQ9NRX6 74 aa9.41□□□□□ -0.9
DDX11-228ENST00000545115 FLG2Q5D862 2391 aaPredicted RBP9.4□□□□□ -0.9
DDX11-228ENST00000545115 CXorf1O96002 111 aa9.4□□□□□ -0.9
DDX11-228ENST00000545115 C1QBP02746 253 aa9.4□□□□□ -0.9
DDX11-228ENST00000545115 ATP6V0CP27449 155 aa9.4□□□□□ -0.9
DDX11-228ENST00000545115 SERF2P84101 59 aa9.4□□□□□ -0.9
DDX11-228ENST00000545115 SAPCD1Q5SSQ6 148 aa9.4□□□□□ -0.9
DDX11-228ENST00000545115 ZFP2Q6ZN57 461 aa9.4□□□□□ -0.9
DDX11-228ENST00000545115 PARLQ9H300 379 aa9.4□□□□□ -0.9
DDX11-228ENST00000545115 VPS13BQ7Z7G8 4022 aa9.4□□□□□ -0.91
DDX11-228ENST00000545115 MYCBP2O75592 4640 aa9.4□□□□□ -0.91
DDX11-228ENST00000545115 A8MWV9 139 aa9.39□□□□□ -0.91
DDX11-228ENST00000545115 S100A4P26447 101 aaKnown RBP9.39□□□□□ -0.91
DDX11-228ENST00000545115 PIK3CD-AS1Q5SR53 167 aa9.39□□□□□ -0.91
DDX11-228ENST00000545115 AQP10Q96PS8 301 aa9.39□□□□□ -0.91
DDX11-228ENST00000545115 FAM30AQ9NZY2 134 aa9.39□□□□□ -0.91
DDX11-228ENST00000545115 TRAV8-3A0A0A6YYJ7 113 aa9.38□□□□□ -0.91
DDX11-228ENST00000545115 GAGE12JA6NER3 117 aa9.38□□□□□ -0.91
DDX11-228ENST00000545115 A6NHS1 94 aa9.38□□□□□ -0.91
DDX11-228ENST00000545115 LINC00694P0DN24 101 aa9.38□□□□□ -0.91
DDX11-228ENST00000545115 GAGE1Q13065 139 aa9.38□□□□□ -0.91
DDX11-228ENST00000545115 GAGE4Q13068 117 aa9.38□□□□□ -0.91
DDX11-228ENST00000545115 GAGE5Q13069 117 aa9.38□□□□□ -0.91
DDX11-228ENST00000545115 GAGE13Q4V321 117 aa9.38□□□□□ -0.91
DDX11-228ENST00000545115 Q8N3U1 123 aa9.38□□□□□ -0.91
DDX11-228ENST00000545115 ACTR3CQ9C0K3 210 aaPredicted RBP9.38□□□□□ -0.91
DDX11-228ENST00000545115 TNFSF18Q9UNG2 199 aa9.38□□□□□ -0.91
DDX11-228ENST00000545115 ALG5Q9Y673 324 aa9.38□□□□□ -0.91
DDX11-228ENST00000545115 IGKV3D-20A0A0C4DH25 116 aa9.37□□□□□ -0.91
DDX11-228ENST00000545115 A0A1W2PRE2 83 aa9.37□□□□□ -0.91
DDX11-228ENST00000545115 ASIPP42127 132 aa9.37□□□□□ -0.91
DDX11-228ENST00000545115 WFDC2Q14508 124 aa9.37□□□□□ -0.91
DDX11-228ENST00000545115 LGALSLQ3ZCW2 172 aaPredicted RBP9.37□□□□□ -0.91
DDX11-228ENST00000545115 TOR2AQ5JU69 321 aa9.37□□□□□ -0.91
DDX11-228ENST00000545115 ARL2-SNX15V9GYD0 113 aa9.37□□□□□ -0.91
DDX11-228ENST00000545115 LINC00479Q96M42 142 aa9.36□□□□□ -0.91
DDX11-228ENST00000545115 A0A087WWC5 75 aa9.35□□□□□ -0.91
DDX11-228ENST00000545115 TRAV34A0A0B4J273 112 aa9.35□□□□□ -0.91
DDX11-228ENST00000545115 FABP5P3A8MUU1 101 aa9.35□□□□□ -0.91
DDX11-228ENST00000545115 FGF8P55075 233 aaPredicted RBP9.35□□□□□ -0.91
DDX11-228ENST00000545115 UFSP1Q6NVU6 142 aa9.35□□□□□ -0.91
DDX11-228ENST00000545115 Q6ZSA8 131 aa9.35□□□□□ -0.91
DDX11-228ENST00000545115 DAZ4Q86SG3 579 aaKnown RBP9.35□□□□□ -0.91
DDX11-228ENST00000545115 OR2T35Q8NGX2 323 aa9.35□□□□□ -0.91
DDX11-228ENST00000545115 DAZ3Q9NR90 486 aaKnown RBP9.35□□□□□ -0.91
DDX11-228ENST00000545115 IL36BQ9NZH7 164 aa9.35□□□□□ -0.91
DDX11-228ENST00000545115 COX11Q9Y6N1 276 aa9.35□□□□□ -0.91
DDX11-228ENST00000545115 RHODO00212 210 aa9.34□□□□□ -0.91
DDX11-228ENST00000545115 IFNA7P01567 189 aa9.34□□□□□ -0.91
DDX11-228ENST00000545115 Q86TA4 180 aa9.34□□□□□ -0.91
DDX11-228ENST00000545115 JPT2Q9H910 190 aa9.34□□□□□ -0.91
DDX11-228ENST00000545115 DNAH8Q96JB1 4490 aa9.33□□□□□ -0.92
DDX11-228ENST00000545115 SRRM2Q9UQ35 2752 aaKnown RBP9.33□□□□□ -0.92
DDX11-228ENST00000545115 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.33□□□□□ -0.92
DDX11-228ENST00000545115 CTXND1A0A1B0GTU2 59 aa9.33□□□□□ -0.92
DDX11-228ENST00000545115 B4DEV8 164 aa9.33□□□□□ -0.92
DDX11-228ENST00000545115 H3BVH4 76 aa9.33□□□□□ -0.92
DDX11-228ENST00000545115 PEX7O00628 323 aa9.33□□□□□ -0.92
DDX11-228ENST00000545115 LECT2O14960 151 aa9.33□□□□□ -0.92
DDX11-228ENST00000545115 PLA2G1BP04054 148 aaKnown RBP9.33□□□□□ -0.92
DDX11-228ENST00000545115 C14orf178Q8N769 122 aaPredicted RBP9.33□□□□□ -0.92
DDX11-228ENST00000545115 SYT8Q8NBV8 401 aa9.33□□□□□ -0.92
DDX11-228ENST00000545115 SAMD10Q9BYL1 202 aa9.33□□□□□ -0.92
DDX11-228ENST00000545115 MED28Q9H204 178 aa9.33□□□□□ -0.92
DDX11-228ENST00000545115 Q9UF83 564 aa9.33□□□□□ -0.92
DDX11-228ENST00000545115 BORCS7-ASMTA0A0B4J1R7 106 aa9.32□□□□□ -0.92
DDX11-228ENST00000545115 J3QL48 77 aa9.32□□□□□ -0.92
DDX11-228ENST00000545115 SEC11BP0C7V7 166 aa9.32□□□□□ -0.92
DDX11-228ENST00000545115 UBE2G2P60604 165 aa9.32□□□□□ -0.92
DDX11-228ENST00000545115 ZNF726P1Q15940 193 aa9.32□□□□□ -0.92
DDX11-228ENST00000545115 DNLZQ5SXM8 178 aa9.32□□□□□ -0.92
DDX11-228ENST00000545115 DMRTA1Q5VZB9 504 aa9.32□□□□□ -0.92
DDX11-228ENST00000545115 RPL7L1Q6DKI1 246 aaKnown RBP9.32□□□□□ -0.92
DDX11-228ENST00000545115 INO80EQ8NBZ0 244 aaPredicted RBP9.32□□□□□ -0.92
DDX11-228ENST00000545115 OR11H4Q8NGC9 324 aa9.32□□□□□ -0.92
DDX11-228ENST00000545115 HIST1H2BAQ96A08 127 aa9.32□□□□□ -0.92
DDX11-228ENST00000545115 RMI2Q96E14 147 aa9.32□□□□□ -0.92
DDX11-228ENST00000545115 NKX6-2Q9C056 277 aaPredicted RBP9.32□□□□□ -0.92
DDX11-228ENST00000545115 URGCP-MRPS24S4R325 110 aa9.32□□□□□ -0.92
DDX11-228ENST00000545115 RNF222A6NCQ9 220 aa9.31□□□□□ -0.92
DDX11-228ENST00000545115 ARMS2P0C7Q2 107 aa9.31□□□□□ -0.92
DDX11-228ENST00000545115 Q5BKY6 102 aa9.31□□□□□ -0.92
DDX11-228ENST00000545115 FAM74A4Q5TZK3 123 aa9.31□□□□□ -0.92
DDX11-228ENST00000545115 NIT1Q86X76 327 aa9.31□□□□□ -0.92
DDX11-228ENST00000545115 LINC00528Q8N1L1 170 aa9.31□□□□□ -0.92
DDX11-228ENST00000545115 BAALCQ8WXS3 180 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms