RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 PRSS47A8MTI9 375 aa4.47□□□□□ -1.69
VPS50-220ENST00000544910 IGLV2-11P01706 119 aa4.47□□□□□ -1.69
VPS50-220ENST00000544910 SH2D6Q7Z4S9 175 aa4.47□□□□□ -1.69
VPS50-220ENST00000544910 PRIMA1Q86XR5 153 aa4.47□□□□□ -1.69
VPS50-220ENST00000544910 SMIM2Q9BVW6 85 aa4.47□□□□□ -1.69
VPS50-220ENST00000544910 AHCTF1Q8WYP5 2266 aa4.47□□□□□ -1.69
VPS50-220ENST00000544910 A0A0U1RRA0 63 aa4.47□□□□□ -1.69
VPS50-220ENST00000544910 A0A1W2PRX2 142 aa4.47□□□□□ -1.69
VPS50-220ENST00000544910 IGHV4-38-2P0DP08 117 aa4.47□□□□□ -1.69
VPS50-220ENST00000544910 C1orf43Q9BWL3 253 aa4.47□□□□□ -1.69
VPS50-220ENST00000544910 ZDBF2Q9HCK1 2354 aa4.47□□□□□ -1.69
VPS50-220ENST00000544910 TRBV25-1A0A075B6N4 114 aa4.47□□□□□ -1.69
VPS50-220ENST00000544910 IGHV4-61A0A0C4DH41 118 aa4.47□□□□□ -1.69
VPS50-220ENST00000544910 PRSS29PA6NIE9 313 aa4.47□□□□□ -1.69
VPS50-220ENST00000544910 MRAPQ8TCY5 172 aa4.46□□□□□ -1.69
VPS50-220ENST00000544910 CCDC140Q96MF4 163 aa4.46□□□□□ -1.69
VPS50-220ENST00000544910 MED13Q9UHV7 2174 aa4.46□□□□□ -1.7
VPS50-220ENST00000544910 TRAV13-2A0A0B4J235 113 aa4.46□□□□□ -1.7
VPS50-220ENST00000544910 J3QQQ9 107 aa4.46□□□□□ -1.7
VPS50-220ENST00000544910 TRGV2A0A075B6R0 118 aa4.46□□□□□ -1.7
VPS50-220ENST00000544910 IGHV3-73A0A0B4J1V6 119 aa4.46□□□□□ -1.7
VPS50-220ENST00000544910 RBX1P62877 108 aa4.46□□□□□ -1.7
VPS50-220ENST00000544910 RPL32P62910 135 aaKnown RBP4.46□□□□□ -1.7
VPS50-220ENST00000544910 RPL36AP83881 106 aaKnown RBP4.46□□□□□ -1.7
VPS50-220ENST00000544910 EBI3Q14213 229 aa4.46□□□□□ -1.7
VPS50-220ENST00000544910 C10orf105Q8TEF2 133 aa4.46□□□□□ -1.7
VPS50-220ENST00000544910 DEFB104AQ8WTQ1 72 aa4.46□□□□□ -1.7
VPS50-220ENST00000544910 RPL36ALQ969Q0 106 aaKnown RBP4.46□□□□□ -1.7
VPS50-220ENST00000544910 LINC01619G3V211 115 aa4.46□□□□□ -1.7
VPS50-220ENST00000544910 GATA1P15976 413 aaPredicted RBP4.46□□□□□ -1.7
VPS50-220ENST00000544910 MSRB1Q9NZV6 116 aa4.46□□□□□ -1.7
VPS50-220ENST00000544910 KLK9Q9UKQ9 250 aa4.46□□□□□ -1.7
VPS50-220ENST00000544910 DOCK11Q5JSL3 2073 aa4.45□□□□□ -1.7
VPS50-220ENST00000544910 C5orf47Q569G3 176 aa4.45□□□□□ -1.7
VPS50-220ENST00000544910 PCP2Q8IVA1 136 aa4.45□□□□□ -1.7
VPS50-220ENST00000544910 KNTC1P50748 2209 aa4.45□□□□□ -1.7
VPS50-220ENST00000544910 IGHV1OR15-1A0A075B7D0 117 aa4.45□□□□□ -1.7
VPS50-220ENST00000544910 A0A0B4J2C4 111 aa4.45□□□□□ -1.7
VPS50-220ENST00000544910 I3L3M4 83 aa4.45□□□□□ -1.7
VPS50-220ENST00000544910 Q8N6K4 173 aa4.45□□□□□ -1.7
VPS50-220ENST00000544910 PRORYQ9H606 182 aa4.45□□□□□ -1.7
VPS50-220ENST00000544910 U3KQK5 164 aa4.45□□□□□ -1.7
VPS50-220ENST00000544910 RNF223E7ERA6 249 aa4.45□□□□□ -1.7
VPS50-220ENST00000544910 RBM3P98179 157 aaKnown RBP4.45□□□□□ -1.7
VPS50-220ENST00000544910 WFDC2Q14508 124 aa4.45□□□□□ -1.7
VPS50-220ENST00000544910 IGHV4-30-2A0A087WSY4 118 aa4.45□□□□□ -1.7
VPS50-220ENST00000544910 GNRH2O43555 120 aa4.45□□□□□ -1.7
VPS50-220ENST00000544910 INSP01308 110 aa4.45□□□□□ -1.7
VPS50-220ENST00000544910 ZNF80P51504 273 aaPredicted RBP4.45□□□□□ -1.7
VPS50-220ENST00000544910 LINC00310P59036 64 aa4.45□□□□□ -1.7
VPS50-220ENST00000544910 NDUFA12Q9UI09 145 aa4.45□□□□□ -1.7
VPS50-220ENST00000544910 SMAD5-AS1Q9Y6J3 95 aa4.45□□□□□ -1.7
VPS50-220ENST00000544910 F6UB75 175 aa4.45□□□□□ -1.7
VPS50-220ENST00000544910 CRIP1P50238 77 aa4.45□□□□□ -1.7
VPS50-220ENST00000544910 RNF114Q9Y508 228 aa4.45□□□□□ -1.7
VPS50-220ENST00000544910 CMC4P56277 68 aaPredicted RBP4.44□□□□□ -1.7
VPS50-220ENST00000544910 SPINK13Q1W4C9 94 aa4.44□□□□□ -1.7
VPS50-220ENST00000544910 TRAV12-2A0A075B6T6 113 aa4.44□□□□□ -1.7
VPS50-220ENST00000544910 IGLC6P0CF74 106 aa4.44□□□□□ -1.7
VPS50-220ENST00000544910 MED14OSP0DP75 135 aa4.44□□□□□ -1.7
VPS50-220ENST00000544910 MRPL23Q16540 153 aaKnown RBP4.44□□□□□ -1.7
VPS50-220ENST00000544910 DEFB112Q30KQ8 113 aa4.44□□□□□ -1.7
VPS50-220ENST00000544910 TRAV13-1A0A0B4J241 112 aa4.44□□□□□ -1.7
VPS50-220ENST00000544910 KNCNA6PVL3 124 aa4.44□□□□□ -1.7
VPS50-220ENST00000544910 C6orf226Q5I0X4 101 aa4.44□□□□□ -1.7
VPS50-220ENST00000544910 ZNF625Q96I27 306 aaPredicted RBP4.44□□□□□ -1.7
VPS50-220ENST00000544910 RHODO00212 210 aa4.44□□□□□ -1.7
VPS50-220ENST00000544910 LMO4P61968 165 aa4.44□□□□□ -1.7
VPS50-220ENST00000544910 Q71RC1 249 aaPredicted RBP4.44□□□□□ -1.7
VPS50-220ENST00000544910 SPATA12Q7Z6I5 190 aa4.44□□□□□ -1.7
VPS50-220ENST00000544910 KLHL30-AS1Q8NEE0 82 aa4.44□□□□□ -1.7
VPS50-220ENST00000544910 CHCHD5Q9BSY4 110 aa4.44□□□□□ -1.7
VPS50-220ENST00000544910 ZFAND3Q9H8U3 227 aa4.44□□□□□ -1.7
VPS50-220ENST00000544910 A6NDX4 124 aa4.43□□□□□ -1.7
VPS50-220ENST00000544910 IGHV4-59P01825 116 aa4.43□□□□□ -1.7
VPS50-220ENST00000544910 MAPK1IP1LQ8NDC0 245 aa4.43□□□□□ -1.7
VPS50-220ENST00000544910 AJUBAQ96IF1 538 aa4.43□□□□□ -1.7
VPS50-220ENST00000544910 TMEM243Q9BU79 118 aa4.43□□□□□ -1.7
VPS50-220ENST00000544910 CACNA1DQ01668 2161 aa4.43□□□□□ -1.7
VPS50-220ENST00000544910 SDHAF1A6NFY7 115 aa4.43□□□□□ -1.7
VPS50-220ENST00000544910 IGHG2P01859 326 aa4.43□□□□□ -1.7
VPS50-220ENST00000544910 PF4P02776 101 aa4.43□□□□□ -1.7
VPS50-220ENST00000544910 ELANEP08246 267 aa4.43□□□□□ -1.7
VPS50-220ENST00000544910 DEFB131AP59861 70 aa4.43□□□□□ -1.7
VPS50-220ENST00000544910 MRGPRG-AS1Q2M3A8 158 aa4.43□□□□□ -1.7
VPS50-220ENST00000544910 TRAV12-1A0A0B4J245 112 aa4.43□□□□□ -1.7
VPS50-220ENST00000544910 TRGV4A0A0C4DH28 118 aa4.43□□□□□ -1.7
VPS50-220ENST00000544910 FAM236AA0A1B0GUQ0 79 aa4.43□□□□□ -1.7
VPS50-220ENST00000544910 FAM236BA0A1B0GV22 79 aa4.43□□□□□ -1.7
VPS50-220ENST00000544910 H3BT86 120 aa4.43□□□□□ -1.7
VPS50-220ENST00000544910 C19orf84I3L1E1 186 aa4.43□□□□□ -1.7
VPS50-220ENST00000544910 HERV-K104P63124 156 aa4.43□□□□□ -1.7
VPS50-220ENST00000544910 TOMM6Q96B49 74 aa4.43□□□□□ -1.7
VPS50-220ENST00000544910 VPREB3Q9UKI3 123 aa4.43□□□□□ -1.7
VPS50-220ENST00000544910 SVILO95425 2214 aa4.43□□□□□ -1.7
VPS50-220ENST00000544910 LINC01548A6NM66 108 aa4.43□□□□□ -1.7
VPS50-220ENST00000544910 FXYD2P54710 66 aa4.43□□□□□ -1.7
VPS50-220ENST00000544910 LOXL1Q08397 574 aaPredicted RBP4.43□□□□□ -1.7
VPS50-220ENST00000544910 LINC01620Q4KN68 170 aa4.43□□□□□ -1.7
VPS50-220ENST00000544910 Q8N976 141 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms