RNA–Protein interactions for RNA: ENST00000544872.1

CIT-216, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-216ENST00000544872 C11orf72Q8NBR9 251 aa6.75□□□□□ -1.33
CIT-216ENST00000544872 PCNPQ8WW12 178 aaKnown RBP6.75□□□□□ -1.33
CIT-216ENST00000544872 RASL10AQ92737 203 aa6.75□□□□□ -1.33
CIT-216ENST00000544872 SMIM7Q9BQ49 75 aa6.75□□□□□ -1.33
CIT-216ENST00000544872 SCRT2Q9NQ03 307 aa6.75□□□□□ -1.33
CIT-216ENST00000544872 MRPL16Q9NX20 251 aaKnown RBP6.75□□□□□ -1.33
CIT-216ENST00000544872 IGHV4-4A0A075B6R2 117 aa6.74□□□□□ -1.33
CIT-216ENST00000544872 TMSB15BA0A087X1C1 80 aa6.74□□□□□ -1.33
CIT-216ENST00000544872 A0A1B0GVY2 172 aa6.74□□□□□ -1.33
CIT-216ENST00000544872 PLAC8L1A1L4L8 177 aa6.74□□□□□ -1.33
CIT-216ENST00000544872 RAB19A4D1S5 217 aa6.74□□□□□ -1.33
CIT-216ENST00000544872 A8MWV9 139 aa6.74□□□□□ -1.33
CIT-216ENST00000544872 KRBOX1C9JBD0 128 aa6.74□□□□□ -1.33
CIT-216ENST00000544872 P0DMU3 169 aa6.74□□□□□ -1.33
CIT-216ENST00000544872 FAM231AP0DMU4 169 aa6.74□□□□□ -1.33
CIT-216ENST00000544872 FAM231CP0DMU5 169 aa6.74□□□□□ -1.33
CIT-216ENST00000544872 LINC01559Q495D7 138 aa6.74□□□□□ -1.33
CIT-216ENST00000544872 PIK3CD-AS1Q5SR53 167 aa6.74□□□□□ -1.33
CIT-216ENST00000544872 ZNF575Q86XF7 245 aa6.74□□□□□ -1.33
CIT-216ENST00000544872 UBE2DNLQ8IWF7 75 aa6.74□□□□□ -1.33
CIT-216ENST00000544872 ZFP82Q8N141 532 aa6.74□□□□□ -1.33
CIT-216ENST00000544872 Q8N1X5 172 aa6.74□□□□□ -1.33
CIT-216ENST00000544872 PTH2Q96A98 100 aa6.74□□□□□ -1.33
CIT-216ENST00000544872 C18orf15Q96N68 181 aa6.74□□□□□ -1.33
CIT-216ENST00000544872 MLST8Q9BVC4 326 aa6.74□□□□□ -1.33
CIT-216ENST00000544872 PARLQ9H300 379 aa6.74□□□□□ -1.33
CIT-216ENST00000544872 IL36BQ9NZH7 164 aa6.74□□□□□ -1.33
CIT-216ENST00000544872 LY96Q9Y6Y9 160 aa6.74□□□□□ -1.33
CIT-216ENST00000544872 F2Z2F3 143 aa6.73□□□□□ -1.33
CIT-216ENST00000544872 PAX4O43316 350 aa6.73□□□□□ -1.33
CIT-216ENST00000544872 NUDT3O95989 172 aa6.73□□□□□ -1.33
CIT-216ENST00000544872 CXCL1P09341 107 aa6.73□□□□□ -1.33
CIT-216ENST00000544872 ARMS2P0C7Q2 107 aa6.73□□□□□ -1.33
CIT-216ENST00000544872 SMIM17P0DL12 118 aa6.73□□□□□ -1.33
CIT-216ENST00000544872 TMEM241Q24JQ0 296 aa6.73□□□□□ -1.33
CIT-216ENST00000544872 SOHLH1Q5JUK2 328 aa6.73□□□□□ -1.33
CIT-216ENST00000544872 SPANXN1Q5VSR9 72 aa6.73□□□□□ -1.33
CIT-216ENST00000544872 C15orf54Q8N8G6 183 aa6.73□□□□□ -1.33
CIT-216ENST00000544872 OR2D3Q8NGH3 330 aa6.73□□□□□ -1.33
CIT-216ENST00000544872 BORCS7Q96B45 105 aa6.73□□□□□ -1.33
CIT-216ENST00000544872 DERL1Q9BUN8 251 aa6.73□□□□□ -1.33
CIT-216ENST00000544872 PRO0255Q9UI72 69 aa6.73□□□□□ -1.33
CIT-216ENST00000544872 HHLA3Q9XRX5 114 aa6.73□□□□□ -1.33
CIT-216ENST00000544872 HSPG2P98160 4391 aa6.73□□□□□ -1.33
CIT-216ENST00000544872 SRRM2Q9UQ35 2752 aaKnown RBP6.73□□□□□ -1.33
CIT-216ENST00000544872 TRAV4A0A0B4J268 109 aa6.72□□□□□ -1.33
CIT-216ENST00000544872 IGKV3D-20A0A0C4DH25 116 aa6.72□□□□□ -1.33
CIT-216ENST00000544872 A0A1W2PPQ1 181 aa6.72□□□□□ -1.33
CIT-216ENST00000544872 GRIFINA4D1Z8 144 aa6.72□□□□□ -1.33
CIT-216ENST00000544872 H3BNG1 76 aa6.72□□□□□ -1.33
CIT-216ENST00000544872 RHODO00212 210 aa6.72□□□□□ -1.33
CIT-216ENST00000544872 IGHV3-53P01767 116 aa6.72□□□□□ -1.33
CIT-216ENST00000544872 CRIP1P50238 77 aa6.72□□□□□ -1.33
CIT-216ENST00000544872 CCL18P55774 89 aa6.72□□□□□ -1.33
CIT-216ENST00000544872 ERVFC1-1P60608 527 aa6.72□□□□□ -1.33
CIT-216ENST00000544872 TMEM88Q6PEY1 159 aa6.72□□□□□ -1.33
CIT-216ENST00000544872 Q6ZQT7 251 aa6.72□□□□□ -1.33
CIT-216ENST00000544872 SMIM15Q7Z3B0 74 aa6.72□□□□□ -1.33
CIT-216ENST00000544872 SH2D6Q7Z4S9 175 aa6.72□□□□□ -1.33
CIT-216ENST00000544872 LINC00612Q8N6U2 182 aa6.72□□□□□ -1.33
CIT-216ENST00000544872 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.72□□□□□ -1.33
CIT-216ENST00000544872 PRADC1Q9BSG0 188 aa6.72□□□□□ -1.33
CIT-216ENST00000544872 TPPP3Q9BW30 176 aa6.72□□□□□ -1.33
CIT-216ENST00000544872 TRAV26-1A0A087WT03 109 aa6.71□□□□□ -1.34
CIT-216ENST00000544872 A8MWL6 223 aa6.71□□□□□ -1.34
CIT-216ENST00000544872 H3BVH4 76 aa6.71□□□□□ -1.34
CIT-216ENST00000544872 M0R381 172 aa6.71□□□□□ -1.34
CIT-216ENST00000544872 GATCO43716 136 aaKnown RBP6.71□□□□□ -1.34
CIT-216ENST00000544872 CACNG7P62955 275 aa6.71□□□□□ -1.34
CIT-216ENST00000544872 CLLU1Q5K131 121 aa6.71□□□□□ -1.34
CIT-216ENST00000544872 DNLZQ5SXM8 178 aa6.71□□□□□ -1.34
CIT-216ENST00000544872 OCC1Q8TAD7 63 aa6.71□□□□□ -1.34
CIT-216ENST00000544872 PRSS29PA6NIE9 313 aa6.7□□□□□ -1.34
CIT-216ENST00000544872 SRP19P09132 144 aaKnown RBP6.7□□□□□ -1.34
CIT-216ENST00000544872 MRPL23Q16540 153 aaKnown RBP6.7□□□□□ -1.34
CIT-216ENST00000544872 LGALS9CQ6DKI2 356 aa6.7□□□□□ -1.34
CIT-216ENST00000544872 FER1L6-AS1Q8NA97 138 aa6.7□□□□□ -1.34
CIT-216ENST00000544872 C9orf85Q96MD7 179 aa6.7□□□□□ -1.34
CIT-216ENST00000544872 RPP21Q9H633 154 aaKnown RBP6.7□□□□□ -1.34
CIT-216ENST00000544872 C11orf21Q9P2W6 132 aa6.7□□□□□ -1.34
CIT-216ENST00000544872 NAT8Q9UHE5 227 aa6.7□□□□□ -1.34
CIT-216ENST00000544872 ICOSQ9Y6W8 199 aa6.7□□□□□ -1.34
CIT-216ENST00000544872 AGRNO00468 2067 aa6.7□□□□□ -1.34
CIT-216ENST00000544872 A0A0J9YY99 117 aa6.69□□□□□ -1.34
CIT-216ENST00000544872 KRTAP9-6A0A140TA67 174 aa6.69□□□□□ -1.34
CIT-216ENST00000544872 OR5AL1P0C617 328 aa6.69□□□□□ -1.34
CIT-216ENST00000544872 INAFM2P0DMQ5 153 aa6.69□□□□□ -1.34
CIT-216ENST00000544872 RNASE3P12724 160 aaKnown RBP6.69□□□□□ -1.34
CIT-216ENST00000544872 FAM3BP58499 235 aaPredicted RBP6.69□□□□□ -1.34
CIT-216ENST00000544872 RNF212Q495C1 297 aa6.69□□□□□ -1.34
CIT-216ENST00000544872 ZFP2Q6ZN57 461 aa6.69□□□□□ -1.34
CIT-216ENST00000544872 NUDT10Q8NFP7 164 aa6.69□□□□□ -1.34
CIT-216ENST00000544872 NUDT11Q96G61 164 aa6.69□□□□□ -1.34
CIT-216ENST00000544872 APLNQ9ULZ1 77 aa6.69□□□□□ -1.34
CIT-216ENST00000544872 DNAH11Q96DT5 4516 aa6.69□□□□□ -1.34
CIT-216ENST00000544872 DYNC1H1Q14204 4646 aaKnown RBP6.69□□□□□ -1.34
CIT-216ENST00000544872 C19orf71A6NCJ1 209 aa6.68□□□□□ -1.34
CIT-216ENST00000544872 PGPEP1LA6NFU8 196 aa6.68□□□□□ -1.34
CIT-216ENST00000544872 RS1O15537 224 aa6.68□□□□□ -1.34
CIT-216ENST00000544872 CDK2AP2O75956 126 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms