RNA–Protein interactions for RNA: ENST00000544552.5

PAAF1-214, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-214ENST00000544552 FAM19A2Q8N3H0 131 aa9.42□□□□□ -0.9
PAAF1-214ENST00000544552 PHLDA3Q9Y5J5 127 aa9.42□□□□□ -0.9
PAAF1-214ENST00000544552 WNK1Q9H4A3 2382 aa9.42□□□□□ -0.9
PAAF1-214ENST00000544552 S100A12P80511 92 aa9.42□□□□□ -0.9
PAAF1-214ENST00000544552 NSUN5P1Q3KNT7 163 aa9.42□□□□□ -0.9
PAAF1-214ENST00000544552 PRIMA1Q86XR5 153 aa9.42□□□□□ -0.9
PAAF1-214ENST00000544552 FAM110AQ9BQ89 295 aa9.42□□□□□ -0.9
PAAF1-214ENST00000544552 TRAV12-2A0A075B6T6 113 aa9.41□□□□□ -0.9
PAAF1-214ENST00000544552 IGHV1OR15-1A0A075B7D0 117 aa9.41□□□□□ -0.9
PAAF1-214ENST00000544552 IGLV1-51P01701 117 aa9.41□□□□□ -0.9
PAAF1-214ENST00000544552 CD7P09564 240 aa9.41□□□□□ -0.9
PAAF1-214ENST00000544552 DEFB125Q8N687 156 aa9.41□□□□□ -0.9
PAAF1-214ENST00000544552 PRSS3P2Q8NHM4 247 aa9.41□□□□□ -0.9
PAAF1-214ENST00000544552 AP5S1Q9NUS5 200 aa9.41□□□□□ -0.9
PAAF1-214ENST00000544552 IGHV3-16A0A0C4DH30 117 aa9.4□□□□□ -0.9
PAAF1-214ENST00000544552 PRSS47A8MTI9 375 aa9.4□□□□□ -0.9
PAAF1-214ENST00000544552 CRXO43186 299 aaPredicted RBP9.4□□□□□ -0.9
PAAF1-214ENST00000544552 ODF3L2Q3SX64 289 aa9.4□□□□□ -0.9
PAAF1-214ENST00000544552 CDPF1Q6NVV7 123 aa9.4□□□□□ -0.9
PAAF1-214ENST00000544552 C9orf85Q96MD7 179 aa9.4□□□□□ -0.9
PAAF1-214ENST00000544552 C20orf144Q9BQM9 153 aa9.4□□□□□ -0.9
PAAF1-214ENST00000544552 RBMY1BA6NDE4 496 aaKnown RBP9.39□□□□□ -0.91
PAAF1-214ENST00000544552 RBMY1EA6NEQ0 496 aaKnown RBP9.39□□□□□ -0.91
PAAF1-214ENST00000544552 M0R381 172 aa9.39□□□□□ -0.91
PAAF1-214ENST00000544552 SAP30O75446 220 aa9.39□□□□□ -0.91
PAAF1-214ENST00000544552 NPYP01303 97 aa9.39□□□□□ -0.91
PAAF1-214ENST00000544552 RBMY1DP0C7P1 496 aaKnown RBP9.39□□□□□ -0.91
PAAF1-214ENST00000544552 FA2HQ7L5A8 372 aa9.39□□□□□ -0.91
PAAF1-214ENST00000544552 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.39□□□□□ -0.91
PAAF1-214ENST00000544552 MRAP2Q96G30 205 aa9.39□□□□□ -0.91
PAAF1-214ENST00000544552 DPH3P1Q9H4G8 78 aa9.39□□□□□ -0.91
PAAF1-214ENST00000544552 TIMM8BQ9Y5J9 83 aaPredicted RBP9.39□□□□□ -0.91
PAAF1-214ENST00000544552 TRGV11A0A075B6L2 103 aa9.38□□□□□ -0.91
PAAF1-214ENST00000544552 IGHV1-24A0A0C4DH33 117 aa9.38□□□□□ -0.91
PAAF1-214ENST00000544552 LINC01546A6NGU7 62 aa9.38□□□□□ -0.91
PAAF1-214ENST00000544552 OR11H12B2RN74 326 aa9.38□□□□□ -0.91
PAAF1-214ENST00000544552 SCGB1D1O95968 90 aa9.38□□□□□ -0.91
PAAF1-214ENST00000544552 IFI27P40305 119 aaPredicted RBP9.38□□□□□ -0.91
PAAF1-214ENST00000544552 ZNF124Q15973 351 aa9.38□□□□□ -0.91
PAAF1-214ENST00000544552 Q8N1Y9 231 aa9.38□□□□□ -0.91
PAAF1-214ENST00000544552 POM121L12Q8N7R1 296 aa9.38□□□□□ -0.91
PAAF1-214ENST00000544552 LINC00467Q9BRT7 94 aa9.38□□□□□ -0.91
PAAF1-214ENST00000544552 GSN-AS1Q9NRJ2 163 aa9.38□□□□□ -0.91
PAAF1-214ENST00000544552 C2CD3Q4AC94 2353 aa9.38□□□□□ -0.91
PAAF1-214ENST00000544552 SETD2Q9BYW2 2564 aaPredicted RBP9.38□□□□□ -0.91
PAAF1-214ENST00000544552 NIPBLQ6KC79 2804 aaeCLIP9.38□□□□□ -0.91
PAAF1-214ENST00000544552 SMKR1H3BMG3 65 aa9.38□□□□□ -0.91
PAAF1-214ENST00000544552 TNFRSF6BO95407 300 aa9.38□□□□□ -0.91
PAAF1-214ENST00000544552 BEAN1Q3B7T3 259 aa9.38□□□□□ -0.91
PAAF1-214ENST00000544552 AP1S3Q96PC3 154 aa9.38□□□□□ -0.91
PAAF1-214ENST00000544552 MAP1LC3AQ9H492 121 aa9.38□□□□□ -0.91
PAAF1-214ENST00000544552 MUC4Q99102 2169 aa9.37□□□□□ -0.91
PAAF1-214ENST00000544552 PCP4L1A6NKN8 68 aa9.37□□□□□ -0.91
PAAF1-214ENST00000544552 C3orf79P0CE67 100 aa9.37□□□□□ -0.91
PAAF1-214ENST00000544552 KRTDAPP60985 99 aa9.37□□□□□ -0.91
PAAF1-214ENST00000544552 KRTAP24-1Q3LI83 254 aa9.37□□□□□ -0.91
PAAF1-214ENST00000544552 LINC00482Q8N8I6 264 aa9.37□□□□□ -0.91
PAAF1-214ENST00000544552 TMEM158Q8WZ71 300 aa9.37□□□□□ -0.91
PAAF1-214ENST00000544552 NXT2Q9NPJ8 142 aaKnown RBP9.37□□□□□ -0.91
PAAF1-214ENST00000544552 MDFICQ9P1T7 246 aa9.37□□□□□ -0.91
PAAF1-214ENST00000544552 KIF25-AS1Q9Y6Z4 181 aa9.37□□□□□ -0.91
PAAF1-214ENST00000544552 CUBNO60494 3623 aa9.36□□□□□ -0.91
PAAF1-214ENST00000544552 LEPROTL1O95214 131 aa9.36□□□□□ -0.91
PAAF1-214ENST00000544552 NCR2O95944 276 aa9.36□□□□□ -0.91
PAAF1-214ENST00000544552 PF4P02776 101 aa9.36□□□□□ -0.91
PAAF1-214ENST00000544552 RBMY1A1P0DJD3 496 aaKnown RBP9.36□□□□□ -0.91
PAAF1-214ENST00000544552 RBMY1CP0DJD4 496 aa9.36□□□□□ -0.91
PAAF1-214ENST00000544552 RBMY1FQ15415 496 aaKnown RBP9.36□□□□□ -0.91
PAAF1-214ENST00000544552 TRPT1Q86TN4 253 aaKnown RBP9.36□□□□□ -0.91
PAAF1-214ENST00000544552 STHQ8IWL8 128 aa9.36□□□□□ -0.91
PAAF1-214ENST00000544552 NRACQ8N912 160 aa9.36□□□□□ -0.91
PAAF1-214ENST00000544552 SYT8Q8NBV8 401 aa9.36□□□□□ -0.91
PAAF1-214ENST00000544552 JMJD1CQ15652 2540 aa9.36□□□□□ -0.91
PAAF1-214ENST00000544552 LOC389332A0A1B0GUA5 103 aa9.35□□□□□ -0.91
PAAF1-214ENST00000544552 GAS8-AS1O95177 125 aa9.35□□□□□ -0.91
PAAF1-214ENST00000544552 BTF3P20290 206 aaKnown RBP9.35□□□□□ -0.91
PAAF1-214ENST00000544552 RIPPLY3P57055 190 aa9.35□□□□□ -0.91
PAAF1-214ENST00000544552 FXYD7P58549 80 aa9.35□□□□□ -0.91
PAAF1-214ENST00000544552 C14orf178Q8N769 122 aaPredicted RBP9.35□□□□□ -0.91
PAAF1-214ENST00000544552 Q8N976 141 aa9.35□□□□□ -0.91
PAAF1-214ENST00000544552 HSPB8Q9UJY1 196 aa9.35□□□□□ -0.91
PAAF1-214ENST00000544552 SPRY2O43597 315 aa9.34□□□□□ -0.91
PAAF1-214ENST00000544552 PPP1R17O96001 155 aa9.34□□□□□ -0.91
PAAF1-214ENST00000544552 INSL3P51460 131 aa9.34□□□□□ -0.91
PAAF1-214ENST00000544552 LINC00315P59091 139 aa9.34□□□□□ -0.91
PAAF1-214ENST00000544552 PMCHL1Q16048 86 aa9.34□□□□□ -0.91
PAAF1-214ENST00000544552 PIK3CD-AS1Q5SR53 167 aa9.34□□□□□ -0.91
PAAF1-214ENST00000544552 TEX43Q6ZNM6 134 aa9.34□□□□□ -0.91
PAAF1-214ENST00000544552 Q8N8P6 123 aa9.34□□□□□ -0.91
PAAF1-214ENST00000544552 CITED1Q99966 193 aa9.34□□□□□ -0.91
PAAF1-214ENST00000544552 CBY3A6NI87 242 aa9.34□□□□□ -0.91
PAAF1-214ENST00000544552 INSP01308 110 aa9.34□□□□□ -0.91
PAAF1-214ENST00000544552 GATA1P15976 413 aaPredicted RBP9.34□□□□□ -0.91
PAAF1-214ENST00000544552 PKIAP61925 76 aa9.34□□□□□ -0.91
PAAF1-214ENST00000544552 NUTF2P61970 127 aaKnown RBP9.34□□□□□ -0.91
PAAF1-214ENST00000544552 PTH2Q96A98 100 aa9.34□□□□□ -0.91
PAAF1-214ENST00000544552 C20orf78Q9BR46 151 aa9.34□□□□□ -0.91
PAAF1-214ENST00000544552 TMEM70Q9BUB7 260 aa9.34□□□□□ -0.91
PAAF1-214ENST00000544552 C19orf73Q9NVV2 129 aa9.34□□□□□ -0.91
PAAF1-214ENST00000544552 IGLV2-18A0A075B6J9 118 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms