RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 BEAN1Q3B7T3 259 aa14.6□□□□□ -0.07
COPS7A-218ENST00000543939 URB1-AS1Q96HZ7 61 aa14.6□□□□□ -0.07
COPS7A-218ENST00000543939 PHLDA3Q9Y5J5 127 aa14.6□□□□□ -0.07
COPS7A-218ENST00000543939 MUC4Q99102 2169 aa14.59□□□□□ -0.07
COPS7A-218ENST00000543939 SPRY2O43597 315 aa14.59□□□□□ -0.07
COPS7A-218ENST00000543939 RBMY1A1P0DJD3 496 aaKnown RBP14.59□□□□□ -0.07
COPS7A-218ENST00000543939 RBMY1CP0DJD4 496 aa14.59□□□□□ -0.07
COPS7A-218ENST00000543939 EVI2AP22794 236 aa14.59□□□□□ -0.07
COPS7A-218ENST00000543939 RBMY1FQ15415 496 aaKnown RBP14.59□□□□□ -0.07
COPS7A-218ENST00000543939 NIT1Q86X76 327 aa14.59□□□□□ -0.07
COPS7A-218ENST00000543939 ORMDL3Q8N138 153 aa14.59□□□□□ -0.07
COPS7A-218ENST00000543939 IGHV3-16A0A0C4DH30 117 aa14.58□□□□□ -0.07
COPS7A-218ENST00000543939 PYY3Q5JQD4 70 aa14.58□□□□□ -0.07
COPS7A-218ENST00000543939 SMIM15Q7Z3B0 74 aa14.58□□□□□ -0.07
COPS7A-218ENST00000543939 FAM110AQ9BQ89 295 aa14.58□□□□□ -0.07
COPS7A-218ENST00000543939 SAMD10Q9BYL1 202 aa14.58□□□□□ -0.07
COPS7A-218ENST00000543939 M0R381 172 aa14.58□□□□□ -0.08
COPS7A-218ENST00000543939 NXPH4O95158 308 aa14.58□□□□□ -0.08
COPS7A-218ENST00000543939 PRELID3AQ96N28 172 aa14.58□□□□□ -0.08
COPS7A-218ENST00000543939 CKS2P33552 79 aa14.57□□□□□ -0.08
COPS7A-218ENST00000543939 RNASEKQ6P5S7 137 aaKnown RBP14.57□□□□□ -0.08
COPS7A-218ENST00000543939 TRPT1Q86TN4 253 aaKnown RBP14.57□□□□□ -0.08
COPS7A-218ENST00000543939 STHQ8IWL8 128 aa14.57□□□□□ -0.08
COPS7A-218ENST00000543939 Q8N1Y9 231 aa14.57□□□□□ -0.08
COPS7A-218ENST00000543939 PPBPP02775 128 aa14.56□□□□□ -0.08
COPS7A-218ENST00000543939 C9orf85Q96MD7 179 aa14.56□□□□□ -0.08
COPS7A-218ENST00000543939 SMKR1H3BMG3 65 aa14.55□□□□□ -0.08
COPS7A-218ENST00000543939 AMTP48728 403 aa14.55□□□□□ -0.08
COPS7A-218ENST00000543939 CHCHD1Q96BP2 118 aaKnown RBP14.55□□□□□ -0.08
COPS7A-218ENST00000543939 C19orf73Q9NVV2 129 aa14.55□□□□□ -0.08
COPS7A-218ENST00000543939 MDFICQ9P1T7 246 aa14.55□□□□□ -0.08
COPS7A-218ENST00000543939 PMCHP20382 165 aa14.55□□□□□ -0.08
COPS7A-218ENST00000543939 HSBP1O75506 76 aa14.54□□□□□ -0.08
COPS7A-218ENST00000543939 NCR2O95944 276 aa14.54□□□□□ -0.08
COPS7A-218ENST00000543939 LINC00614P0C842 121 aa14.54□□□□□ -0.08
COPS7A-218ENST00000543939 FAM19A2Q8N3H0 131 aa14.54□□□□□ -0.08
COPS7A-218ENST00000543939 JMJD1CQ15652 2540 aa14.53□□□□□ -0.08
COPS7A-218ENST00000543939 TRGV11A0A075B6L2 103 aa14.53□□□□□ -0.08
COPS7A-218ENST00000543939 NPYP01303 97 aa14.53□□□□□ -0.08
COPS7A-218ENST00000543939 JOSD1Q15040 202 aaPredicted RBP14.53□□□□□ -0.08
COPS7A-218ENST00000543939 Q6ZWC4 215 aa14.53□□□□□ -0.08
COPS7A-218ENST00000543939 SPATA3Q8NHX4 192 aa14.53□□□□□ -0.08
COPS7A-218ENST00000543939 C20orf144Q9BQM9 153 aa14.53□□□□□ -0.08
COPS7A-218ENST00000543939 NIPBLQ6KC79 2804 aaeCLIP14.53□□□□□ -0.08
COPS7A-218ENST00000543939 GAS8-AS1O95177 125 aa14.52□□□□□ -0.08
COPS7A-218ENST00000543939 LAMTOR2Q9Y2Q5 125 aa14.52□□□□□ -0.08
COPS7A-218ENST00000543939 INSP01308 110 aa14.52□□□□□ -0.09
COPS7A-218ENST00000543939 INSL3P51460 131 aa14.52□□□□□ -0.09
COPS7A-218ENST00000543939 LINC00467Q9BRT7 94 aa14.52□□□□□ -0.09
COPS7A-218ENST00000543939 DPH3P1Q9H4G8 78 aa14.52□□□□□ -0.09
COPS7A-218ENST00000543939 CBY3A6NI87 242 aa14.51□□□□□ -0.09
COPS7A-218ENST00000543939 AP1S3Q96PC3 154 aa14.51□□□□□ -0.09
COPS7A-218ENST00000543939 KRTAP24-1Q3LI83 254 aa14.5□□□□□ -0.09
COPS7A-218ENST00000543939 C9orf66Q5T8R8 295 aa14.5□□□□□ -0.09
COPS7A-218ENST00000543939 C14orf178Q8N769 122 aaPredicted RBP14.5□□□□□ -0.09
COPS7A-218ENST00000543939 PRSS3P2Q8NHM4 247 aa14.5□□□□□ -0.09
COPS7A-218ENST00000543939 WFDC10AQ9H1F0 79 aa14.5□□□□□ -0.09
COPS7A-218ENST00000543939 TENM1Q9UKZ4 2725 aa14.5□□□□□ -0.09
COPS7A-218ENST00000543939 TEP1Q99973 2627 aaKnown RBP14.5□□□□□ -0.09
COPS7A-218ENST00000543939 GATA1P15976 413 aaPredicted RBP14.49□□□□□ -0.09
COPS7A-218ENST00000543939 IFI27P40305 119 aaPredicted RBP14.49□□□□□ -0.09
COPS7A-218ENST00000543939 MRAP2Q96G30 205 aa14.49□□□□□ -0.09
COPS7A-218ENST00000543939 NIT2Q9NQR4 276 aa14.49□□□□□ -0.09
COPS7A-218ENST00000543939 XCL2Q9UBD3 114 aa14.49□□□□□ -0.09
COPS7A-218ENST00000543939 KIF25-AS1Q9Y6Z4 181 aa14.49□□□□□ -0.09
COPS7A-218ENST00000543939 LOC389332A0A1B0GUA5 103 aa14.49□□□□□ -0.09
COPS7A-218ENST00000543939 TNFRSF6BO95407 300 aa14.49□□□□□ -0.09
COPS7A-218ENST00000543939 CDPF1Q6NVV7 123 aa14.49□□□□□ -0.09
COPS7A-218ENST00000543939 NUTF2P61970 127 aaKnown RBP14.48□□□□□ -0.09
COPS7A-218ENST00000543939 FA2HQ7L5A8 372 aa14.48□□□□□ -0.09
COPS7A-218ENST00000543939 POM121L12Q8N7R1 296 aa14.48□□□□□ -0.09
COPS7A-218ENST00000543939 NRACQ8N912 160 aa14.48□□□□□ -0.09
COPS7A-218ENST00000543939 SYT8Q8NBV8 401 aa14.48□□□□□ -0.09
COPS7A-218ENST00000543939 ATRQ13535 2644 aa14.48□□□□□ -0.09
COPS7A-218ENST00000543939 TRAV26-2A0A0B4J265 109 aa14.47□□□□□ -0.09
COPS7A-218ENST00000543939 IGHV1-24A0A0C4DH33 117 aa14.47□□□□□ -0.09
COPS7A-218ENST00000543939 PMCHL1Q16048 86 aa14.47□□□□□ -0.09
COPS7A-218ENST00000543939 LINC01587Q99440 93 aa14.47□□□□□ -0.09
COPS7A-218ENST00000543939 MAP1LC3AQ9H492 121 aa14.47□□□□□ -0.09
COPS7A-218ENST00000543939 AP5S1Q9NUS5 200 aa14.47□□□□□ -0.09
COPS7A-218ENST00000543939 HTN1P15515 57 aa14.46□□□□□ -0.09
COPS7A-218ENST00000543939 LINC00315P59091 139 aa14.46□□□□□ -0.09
COPS7A-218ENST00000543939 C1orf158Q8N1D5 194 aa14.46□□□□□ -0.09
COPS7A-218ENST00000543939 JPT2Q9H910 190 aa14.46□□□□□ -0.09
COPS7A-218ENST00000543939 GSN-AS1Q9NRJ2 163 aa14.46□□□□□ -0.09
COPS7A-218ENST00000543939 PRM2P04554 102 aa14.46□□□□□ -0.1
COPS7A-218ENST00000543939 DEFB125Q8N687 156 aa14.45□□□□□ -0.1
COPS7A-218ENST00000543939 PRSS47A8MTI9 375 aa14.44□□□□□ -0.1
COPS7A-218ENST00000543939 MGPP08493 103 aa14.44□□□□□ -0.1
COPS7A-218ENST00000543939 GIG44P09565 113 aaPredicted RBP14.44□□□□□ -0.1
COPS7A-218ENST00000543939 SMIM17P0DL12 118 aa14.44□□□□□ -0.1
COPS7A-218ENST00000543939 WFDC9Q8NEX5 89 aa14.44□□□□□ -0.1
COPS7A-218ENST00000543939 ZNF415Q09FC8 603 aa14.44□□□□□ -0.1
COPS7A-218ENST00000543939 C11orf72Q8NBR9 251 aa14.44□□□□□ -0.1
COPS7A-218ENST00000543939 LINC01546A6NGU7 62 aa14.43□□□□□ -0.1
COPS7A-218ENST00000543939 RPL35AP18077 110 aaKnown RBP14.43□□□□□ -0.1
COPS7A-218ENST00000543939 KRTDAPP60985 99 aa14.43□□□□□ -0.1
COPS7A-218ENST00000543939 ZNF876PQ49A33 203 aa14.43□□□□□ -0.1
COPS7A-218ENST00000543939 MCRIP2Q9BUT9 160 aaKnown RBP14.43□□□□□ -0.1
COPS7A-218ENST00000543939 ZNF747Q9BV97 191 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms