RNA–Protein interactions for RNA: ENST00000543462.1

VEGFB-204, Transcript of vascular endothelial growth factor B, humanhuman

TSL 2

Gene VEGFB, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-204ENST00000543462 SRSF3P84103 164 aaKnown RBP6.94□□□□□ -1.3
VEGFB-204ENST00000543462 TMEM88Q6PEY1 159 aa6.94□□□□□ -1.3
VEGFB-204ENST00000543462 LINC00476Q8WZB0 136 aa6.94□□□□□ -1.3
VEGFB-204ENST00000543462 KMT2AQ03164 3969 aa6.93□□□□□ -1.3
VEGFB-204ENST00000543462 H3BNG1 76 aa6.93□□□□□ -1.3
VEGFB-204ENST00000543462 SNAI2O43623 268 aa6.93□□□□□ -1.3
VEGFB-204ENST00000543462 ASIPP42127 132 aa6.93□□□□□ -1.3
VEGFB-204ENST00000543462 UQCC3Q6UW78 93 aa6.93□□□□□ -1.3
VEGFB-204ENST00000543462 COMMD7Q86VX2 200 aa6.93□□□□□ -1.3
VEGFB-204ENST00000543462 VSIG2Q96IQ7 327 aa6.93□□□□□ -1.3
VEGFB-204ENST00000543462 SSBP4Q9BWG4 385 aaPredicted RBP6.93□□□□□ -1.3
VEGFB-204ENST00000543462 SMDT1Q9H4I9 107 aa6.93□□□□□ -1.3
VEGFB-204ENST00000543462 LY96Q9Y6Y9 160 aa6.93□□□□□ -1.3
VEGFB-204ENST00000543462 TRAV4A0A0B4J268 109 aa6.92□□□□□ -1.3
VEGFB-204ENST00000543462 IGLL5B9A064 214 aa6.92□□□□□ -1.3
VEGFB-204ENST00000543462 H3BVH4 76 aa6.92□□□□□ -1.3
VEGFB-204ENST00000543462 ORM1P02763 201 aa6.92□□□□□ -1.3
VEGFB-204ENST00000543462 IGLC6P0CF74 106 aa6.92□□□□□ -1.3
VEGFB-204ENST00000543462 HTN3P15516 51 aa6.92□□□□□ -1.3
VEGFB-204ENST00000543462 FHL2Q14192 279 aa6.92□□□□□ -1.3
VEGFB-204ENST00000543462 PRR27Q6MZM9 219 aa6.92□□□□□ -1.3
VEGFB-204ENST00000543462 UFSP1Q6NVU6 142 aa6.92□□□□□ -1.3
VEGFB-204ENST00000543462 OCC1Q8TAD7 63 aa6.92□□□□□ -1.3
VEGFB-204ENST00000543462 EIF5A2Q9GZV4 153 aaKnown RBP6.92□□□□□ -1.3
VEGFB-204ENST00000543462 TRGV2A0A075B6R0 118 aa6.91□□□□□ -1.3
VEGFB-204ENST00000543462 GRIFINA4D1Z8 144 aa6.91□□□□□ -1.3
VEGFB-204ENST00000543462 F5H768 121 aa6.91□□□□□ -1.3
VEGFB-204ENST00000543462 RS1O15537 224 aa6.91□□□□□ -1.3
VEGFB-204ENST00000543462 OR5AL1P0C617 328 aa6.91□□□□□ -1.3
VEGFB-204ENST00000543462 ARMS2P0C7Q2 107 aa6.91□□□□□ -1.3
VEGFB-204ENST00000543462 OR5I1Q13606 314 aa6.91□□□□□ -1.3
VEGFB-204ENST00000543462 LGALS9CQ6DKI2 356 aa6.91□□□□□ -1.3
VEGFB-204ENST00000543462 LINC01551Q86U37 167 aa6.91□□□□□ -1.3
VEGFB-204ENST00000543462 ZNF479Q96JC4 524 aa6.91□□□□□ -1.3
VEGFB-204ENST00000543462 TRAV26-1A0A087WT03 109 aa6.9□□□□□ -1.3
VEGFB-204ENST00000543462 TMSB15BA0A087X1C1 80 aa6.9□□□□□ -1.3
VEGFB-204ENST00000543462 SFTA3P0C7M3 94 aa6.9□□□□□ -1.3
VEGFB-204ENST00000543462 MGST1P10620 155 aaKnown RBP6.9□□□□□ -1.3
VEGFB-204ENST00000543462 ZNF876PQ49A33 203 aa6.9□□□□□ -1.3
VEGFB-204ENST00000543462 CFAP126Q5VTH2 177 aa6.9□□□□□ -1.3
VEGFB-204ENST00000543462 FAM231DQ6ZW35 169 aa6.9□□□□□ -1.3
VEGFB-204ENST00000543462 C15orf53Q8NAA6 179 aa6.9□□□□□ -1.3
VEGFB-204ENST00000543462 SMIM7Q9BQ49 75 aa6.9□□□□□ -1.3
VEGFB-204ENST00000543462 BIN3Q9NQY0 253 aa6.9□□□□□ -1.3
VEGFB-204ENST00000543462 IGHV3-53P01767 116 aa6.89□□□□□ -1.31
VEGFB-204ENST00000543462 GATA1P15976 413 aaPredicted RBP6.89□□□□□ -1.31
VEGFB-204ENST00000543462 CTRLP40313 264 aa6.89□□□□□ -1.31
VEGFB-204ENST00000543462 CRYBA4P53673 196 aa6.89□□□□□ -1.31
VEGFB-204ENST00000543462 DMRTA1Q5VZB9 504 aa6.89□□□□□ -1.31
VEGFB-204ENST00000543462 NUDT10Q8NFP7 164 aa6.89□□□□□ -1.31
VEGFB-204ENST00000543462 OR10AG1Q8NH19 301 aa6.89□□□□□ -1.31
VEGFB-204ENST00000543462 NUDT11Q96G61 164 aa6.89□□□□□ -1.31
VEGFB-204ENST00000543462 CNFNQ9BYD5 112 aa6.89□□□□□ -1.31
VEGFB-204ENST00000543462 ZNF727A8MUV8 499 aa6.88□□□□□ -1.31
VEGFB-204ENST00000543462 P01737 135 aa6.88□□□□□ -1.31
VEGFB-204ENST00000543462 LINC00694P0DN24 101 aa6.88□□□□□ -1.31
VEGFB-204ENST00000543462 GZMBP10144 247 aa6.88□□□□□ -1.31
VEGFB-204ENST00000543462 S100A4P26447 101 aaKnown RBP6.88□□□□□ -1.31
VEGFB-204ENST00000543462 RPS20P60866 119 aaKnown RBP6.88□□□□□ -1.31
VEGFB-204ENST00000543462 PEA15Q15121 130 aa6.88□□□□□ -1.31
VEGFB-204ENST00000543462 FAM74A3Q4VXF1 159 aa6.88□□□□□ -1.31
VEGFB-204ENST00000543462 ZFP2Q6ZN57 461 aa6.88□□□□□ -1.31
VEGFB-204ENST00000543462 OR2D3Q8NGH3 330 aa6.88□□□□□ -1.31
VEGFB-204ENST00000543462 SAMD10Q9BYL1 202 aa6.88□□□□□ -1.31
VEGFB-204ENST00000543462 RNASE7Q9H1E1 156 aaKnown RBP6.88□□□□□ -1.31
VEGFB-204ENST00000543462 RPP21Q9H633 154 aaKnown RBP6.88□□□□□ -1.31
VEGFB-204ENST00000543462 JPT2Q9H910 190 aa6.88□□□□□ -1.31
VEGFB-204ENST00000543462 PRO0255Q9UI72 69 aa6.88□□□□□ -1.31
VEGFB-204ENST00000543462 A0A096LPF7 62 aa6.87□□□□□ -1.31
VEGFB-204ENST00000543462 A8MWV9 139 aa6.87□□□□□ -1.31
VEGFB-204ENST00000543462 CIDEAO60543 219 aa6.87□□□□□ -1.31
VEGFB-204ENST00000543462 CRYGDP07320 174 aa6.87□□□□□ -1.31
VEGFB-204ENST00000543462 RPL23P62829 140 aaKnown RBP6.87□□□□□ -1.31
VEGFB-204ENST00000543462 CT83Q5H943 113 aa6.87□□□□□ -1.31
VEGFB-204ENST00000543462 ZFP82Q8N141 532 aa6.87□□□□□ -1.31
VEGFB-204ENST00000543462 OR4C5Q8NGB2 326 aa6.87□□□□□ -1.31
VEGFB-204ENST00000543462 GTSF1Q8WW33 167 aa6.87□□□□□ -1.31
VEGFB-204ENST00000543462 ISOC2Q96AB3 205 aa6.87□□□□□ -1.31
VEGFB-204ENST00000543462 SFRP2Q96HF1 295 aa6.87□□□□□ -1.31
VEGFB-204ENST00000543462 KIF25-AS1Q9Y6Z4 181 aa6.87□□□□□ -1.31
VEGFB-204ENST00000543462 A0A0J9YY99 117 aa6.86□□□□□ -1.31
VEGFB-204ENST00000543462 CEBPGP53567 150 aa6.86□□□□□ -1.31
VEGFB-204ENST00000543462 LINC00315P59091 139 aa6.86□□□□□ -1.31
VEGFB-204ENST00000543462 SLAQ13239 276 aa6.86□□□□□ -1.31
VEGFB-204ENST00000543462 Q6ZSN1 163 aa6.86□□□□□ -1.31
VEGFB-204ENST00000543462 FER1L6-AS1Q8NA97 138 aa6.86□□□□□ -1.31
VEGFB-204ENST00000543462 OSTCQ9NRP0 149 aa6.86□□□□□ -1.31
VEGFB-204ENST00000543462 NAT8Q9UHE5 227 aa6.86□□□□□ -1.31
VEGFB-204ENST00000543462 HHLA3Q9XRX5 114 aa6.86□□□□□ -1.31
VEGFB-204ENST00000543462 PHLDA3Q9Y5J5 127 aa6.86□□□□□ -1.31
VEGFB-204ENST00000543462 TRGV4A0A0C4DH28 118 aa6.85□□□□□ -1.31
VEGFB-204ENST00000543462 TRBV6-4A0A1B0GX49 114 aa6.85□□□□□ -1.31
VEGFB-204ENST00000543462 M0R381 172 aa6.85□□□□□ -1.31
VEGFB-204ENST00000543462 RHODO00212 210 aa6.85□□□□□ -1.31
VEGFB-204ENST00000543462 PAX4O43316 350 aa6.85□□□□□ -1.31
VEGFB-204ENST00000543462 P0DMU3 169 aa6.85□□□□□ -1.31
VEGFB-204ENST00000543462 FAM231AP0DMU4 169 aa6.85□□□□□ -1.31
VEGFB-204ENST00000543462 FAM231CP0DMU5 169 aa6.85□□□□□ -1.31
VEGFB-204ENST00000543462 TMEM241Q24JQ0 296 aa6.85□□□□□ -1.31
VEGFB-204ENST00000543462 RNF212Q495C1 297 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms