RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 EML6Q6ZMW3 1958 aa10.21□□□□□ -0.77
TNC-212ENST00000542877 KIAA1671Q9BY89 1806 aa10.21□□□□□ -0.77
TNC-212ENST00000542877 GTSF1Q8WW33 167 aa10.21□□□□□ -0.77
TNC-212ENST00000542877 SH2D6Q7Z4S9 175 aa10.21□□□□□ -0.78
TNC-212ENST00000542877 PIP4P1Q86T03 277 aa10.21□□□□□ -0.78
TNC-212ENST00000542877 MSRB1Q9NZV6 116 aa10.21□□□□□ -0.78
TNC-212ENST00000542877 SHANK1Q9Y566 2161 aa10.21□□□□□ -0.78
TNC-212ENST00000542877 BUB3O43684 328 aa10.2□□□□□ -0.78
TNC-212ENST00000542877 C16orf54Q6UWD8 224 aa10.2□□□□□ -0.78
TNC-212ENST00000542877 XCL1P47992 114 aa10.2□□□□□ -0.78
TNC-212ENST00000542877 CITED1Q99966 193 aa10.2□□□□□ -0.78
TNC-212ENST00000542877 WI2-2373I1.2A0A1W2PRP0 233 aa10.2□□□□□ -0.78
TNC-212ENST00000542877 DEFB112Q30KQ8 113 aa10.2□□□□□ -0.78
TNC-212ENST00000542877 H0YGX0 51 aa10.2□□□□□ -0.78
TNC-212ENST00000542877 A0A096LPF7 62 aa10.19□□□□□ -0.78
TNC-212ENST00000542877 MUSTN1Q8IVN3 82 aa10.19□□□□□ -0.78
TNC-212ENST00000542877 RITA1Q96K30 269 aa10.19□□□□□ -0.78
TNC-212ENST00000542877 TRBV6-1A0A0K0K1D8 114 aa10.19□□□□□ -0.78
TNC-212ENST00000542877 A4D1N5 150 aa10.19□□□□□ -0.78
TNC-212ENST00000542877 SPRY2O43597 315 aa10.19□□□□□ -0.78
TNC-212ENST00000542877 IGHV4-59P01825 116 aa10.19□□□□□ -0.78
TNC-212ENST00000542877 CLPSL2Q6UWE3 100 aa10.19□□□□□ -0.78
TNC-212ENST00000542877 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.19□□□□□ -0.78
TNC-212ENST00000542877 A0A0J9YXV3 536 aa10.18□□□□□ -0.78
TNC-212ENST00000542877 TEN1Q86WV5 123 aa10.18□□□□□ -0.78
TNC-212ENST00000542877 ICOSQ9Y6W8 199 aa10.18□□□□□ -0.78
TNC-212ENST00000542877 FXYD2P54710 66 aa10.18□□□□□ -0.78
TNC-212ENST00000542877 GTF3C1Q12789 2109 aa10.18□□□□□ -0.78
TNC-212ENST00000542877 B5MCH6 92 aa10.17□□□□□ -0.78
TNC-212ENST00000542877 C9orf47Q6ZRZ4 202 aa10.17□□□□□ -0.78
TNC-212ENST00000542877 AJUBAQ96IF1 538 aa10.17□□□□□ -0.78
TNC-212ENST00000542877 IGLV2-14P01704 120 aa10.17□□□□□ -0.78
TNC-212ENST00000542877 IGLV2-23P01705 113 aa10.17□□□□□ -0.78
TNC-212ENST00000542877 MED14OSP0DP75 135 aa10.17□□□□□ -0.78
TNC-212ENST00000542877 CTRLP40313 264 aa10.17□□□□□ -0.78
TNC-212ENST00000542877 C11orf1Q9H5F2 150 aa10.17□□□□□ -0.78
TNC-212ENST00000542877 TAX1BP3O14907 124 aa10.17□□□□□ -0.78
TNC-212ENST00000542877 TANC1Q9C0D5 1861 aa10.17□□□□□ -0.78
TNC-212ENST00000542877 TMEM258P61165 79 aa10.17□□□□□ -0.78
TNC-212ENST00000542877 TOMM6Q96B49 74 aa10.17□□□□□ -0.78
TNC-212ENST00000542877 DKK4Q9UBT3 224 aa10.17□□□□□ -0.78
TNC-212ENST00000542877 DAZ2Q13117 558 aaKnown RBP10.16□□□□□ -0.78
TNC-212ENST00000542877 DAZ4Q86SG3 579 aaKnown RBP10.16□□□□□ -0.78
TNC-212ENST00000542877 DAZ3Q9NR90 486 aaKnown RBP10.16□□□□□ -0.78
TNC-212ENST00000542877 TRAV4A0A0B4J268 109 aa10.16□□□□□ -0.78
TNC-212ENST00000542877 LINC01620Q4KN68 170 aa10.16□□□□□ -0.78
TNC-212ENST00000542877 PCNX1Q96RV3 2341 aa10.16□□□□□ -0.78
TNC-212ENST00000542877 K7EQD1 137 aa10.16□□□□□ -0.78
TNC-212ENST00000542877 TEX22C9J3V5 150 aa10.16□□□□□ -0.78
TNC-212ENST00000542877 E9PLD3 99 aa10.16□□□□□ -0.78
TNC-212ENST00000542877 TIMM17AQ99595 171 aa10.16□□□□□ -0.78
TNC-212ENST00000542877 SND1-IT1Q9HBX3 110 aa10.16□□□□□ -0.78
TNC-212ENST00000542877 IGKV1OR2-108A0A075B7D4 117 aa10.15□□□□□ -0.78
TNC-212ENST00000542877 hADV29S1A0JD25 119 aa10.15□□□□□ -0.78
TNC-212ENST00000542877 CCL24O00175 119 aa10.15□□□□□ -0.78
TNC-212ENST00000542877 C5orf38Q86SI9 138 aa10.15□□□□□ -0.78
TNC-212ENST00000542877 Q8N9W7 124 aa10.15□□□□□ -0.78
TNC-212ENST00000542877 C16orf74Q96GX8 76 aa10.15□□□□□ -0.78
TNC-212ENST00000542877 A0A0B4J2C4 111 aa10.15□□□□□ -0.79
TNC-212ENST00000542877 NBL1P41271 181 aa10.15□□□□□ -0.79
TNC-212ENST00000542877 RBM3P98179 157 aaKnown RBP10.15□□□□□ -0.79
TNC-212ENST00000542877 BAALCQ8WXS3 180 aa10.15□□□□□ -0.79
TNC-212ENST00000542877 GRNP28799 593 aaKnown RBP10.14□□□□□ -0.79
TNC-212ENST00000542877 RS1O15537 224 aa10.14□□□□□ -0.79
TNC-212ENST00000542877 NOTCH4Q99466 2003 aa10.14□□□□□ -0.79
TNC-212ENST00000542877 MRAPQ8TCY5 172 aa10.14□□□□□ -0.79
TNC-212ENST00000542877 RNASE8Q8TDE3 154 aaKnown RBP10.14□□□□□ -0.79
TNC-212ENST00000542877 PRAC2D3DTV9 90 aa10.14□□□□□ -0.79
TNC-212ENST00000542877 ODF3L1Q8IXM7 274 aa10.14□□□□□ -0.79
TNC-212ENST00000542877 NUP210Q8TEM1 1887 aaPredicted RBP10.14□□□□□ -0.79
TNC-212ENST00000542877 A0A0J9YY99 117 aa10.14□□□□□ -0.79
TNC-212ENST00000542877 WFDC2Q14508 124 aa10.14□□□□□ -0.79
TNC-212ENST00000542877 FRMPD3Q5JV73 1810 aa10.13□□□□□ -0.79
TNC-212ENST00000542877 CITED2Q99967 270 aaPredicted RBP10.13□□□□□ -0.79
TNC-212ENST00000542877 C19orf71A6NCJ1 209 aa10.13□□□□□ -0.79
TNC-212ENST00000542877 K7EMT4 169 aa10.13□□□□□ -0.79
TNC-212ENST00000542877 IGLV1-47P01700 117 aa10.13□□□□□ -0.79
TNC-212ENST00000542877 IGF2-ASQ6U949 168 aa10.13□□□□□ -0.79
TNC-212ENST00000542877 Q6ZQT7 251 aa10.13□□□□□ -0.79
TNC-212ENST00000542877 APRG1Q8IVJ8 170 aa10.13□□□□□ -0.79
TNC-212ENST00000542877 C11orf86A6NJI1 115 aa10.13□□□□□ -0.79
TNC-212ENST00000542877 WT1P19544 449 aaPredicted RBP10.13□□□□□ -0.79
TNC-212ENST00000542877 C5orf56Q8N8D9 126 aa10.13□□□□□ -0.79
TNC-212ENST00000542877 DEFB136Q30KP8 78 aa10.13□□□□□ -0.79
TNC-212ENST00000542877 COX7B2Q8TF08 81 aa10.13□□□□□ -0.79
TNC-212ENST00000542877 SLURP1P55000 103 aa10.12□□□□□ -0.79
TNC-212ENST00000542877 DENND4CQ5VZ89 1909 aa10.12□□□□□ -0.79
TNC-212ENST00000542877 IGKV2D-24A0A075B6R9 120 aa10.12□□□□□ -0.79
TNC-212ENST00000542877 H3BQ85 93 aa10.12□□□□□ -0.79
TNC-212ENST00000542877 ODF1Q14990 250 aa10.12□□□□□ -0.79
TNC-212ENST00000542877 ATP6V0E2Q8NHE4 81 aa10.12□□□□□ -0.79
TNC-212ENST00000542877 TTTY13Q9BZ97 58 aa10.12□□□□□ -0.79
TNC-212ENST00000542877 SS18L2Q9UHA2 77 aa10.12□□□□□ -0.79
TNC-212ENST00000542877 MED13Q9UHV7 2174 aa10.12□□□□□ -0.79
TNC-212ENST00000542877 IGHV4-61A0A0C4DH41 118 aa10.12□□□□□ -0.79
TNC-212ENST00000542877 ATOX1O00244 68 aa10.12□□□□□ -0.79
TNC-212ENST00000542877 RPL39P62891 51 aaKnown RBP10.12□□□□□ -0.79
TNC-212ENST00000542877 FOXI1Q12951 378 aa10.12□□□□□ -0.79
TNC-212ENST00000542877 CHD3Q12873 2000 aaKnown RBP10.12□□□□□ -0.79
TNC-212ENST00000542877 IGHV4-38-2P0DP08 117 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms